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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL80920_cuf0 >transcript:BL80920_cuf0-protein ID=transcript:BL80920_cuf0-protein|Name=transcript:BL80920_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=136bp
MPMLLELSGTVTSPTGQEAVMKIIMVYWSEITRAMAASAELLQGLQSHCT
QQIHSCSTLVARVWANAIRRHQVTSIRPSPTEVRYSFTPGWSEERRIKCL
SQGHNFGAYQWFRTRGLSVLGETPYRLHHTTPLNLP Run BLAST on NCBI mRNA from alignment at Sc0000270:257173..259205+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL80920_cuf0 ID=transcript:BL80920_cuf0|Name=transcript:BL80920_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2033bp|location=Sequence derived from alignment at Sc0000270:257173..259205+ (Branchiostoma lanceolatum)
CCTGCGCGAGCAAGCCAACGAATCGAGCGATAGGGGTCCTGCTTTTAGGA
GGGTGCTATTTCCATACACAAAGTAAAGCAAAGATTTCGACCAGTGCTCT
GATTCTTCTCAAGTTGATTTGACCTGATGCCAATGTTACTTGAACTGAGT
GGAACTGTGACGTCACCAACGGGTCAAGAGGCAGTAATGAAAATAATAAT
GGTTTATTGGTCAGAAATTACCCGTGCAATGGCAGCCAGTGCTGAATTGC
TGCAGGGTTTACAATCACATTGTACTCAACAGATACATAGTTGCTCCACA
CTTGTCGCAAGGGTCTGGGCTAATGCCATTCGGCGCCACCAGGTGACCTC
AATACGACCTTCCCCAACCGAAGTCAGGTACTCATTCACACCTGGATGGA
GTGAGGAAAGGCGTATAAAGTGCCTTTCCCAAGGGCACAACTTCGGAGCA
TACCAATGGTTTCGAACCCGGGGCCTCTCGGTTCTGGGCGAAACACCCTA
CCGTTTGCACCACACGACGCCACTAAATCTACCTTAGGGCCCATCGACCA
TCCCTCCACAGAGACACGGTCGATACTGACTGCCGGACACATTTGACCGT
TGCCGACATCACACTTCCGGTCAGGTCAAGTGACGTAGGCTTCGGGTCAA
ATCATCTTGAGAAGGACAAGACAACTGGTCAAAAGCTTGTTGGCAAGTGC
TTTACTTTGTGTACGGATGTAGATTTGTTACTTTATAATGTCAATTACTG
TCAGATGAACCATCATAAAAATGCAGTTACTATAATGTTTGTATTCTGAC
AGGTCACTGTATACATTTTTGTTTTGTATTTCAATTCCCATGTCCAGGGT
TCAAAATACCTTGAGGATCCTTTGGTGAAGTAGGCCTGTGTTGTCACTCT
TGCCGCGCCACAACGAAACCTCCTCCTTCTAACTTGCCAACTAAAAACTG
GCTAAGACGGGCCTAAAAAATACTGGGTGCAATTATTGTGCACTTCTGTG
TACCCACAATTTTTTACAGTGGGTGCACCGTTATATTTGTATATATGATA
GGGCTACTTACTATATTAGTATTATACATTACATAGCATATTCTTGACAT
GAAAGTGCCAAAAGATAGTAAAACTTTTGTTGTATTATTTAATTGTTCAA
AGCTTTGAACATCTGTAGCTATAGAACTTCAGATTCAAGTTCCTTAAGAG
AAGTTCATGTGTAGTTTAAGGTTTGTAATTAGGTTTTGCTGATATTTTAC
TTTATTTATGTTTGAACCCCAAAATGTTTGTGTTTTCCTAAATTTCTGGG
TGAGGTGCCCCAGTGCAGCTATTCCTCAAAATGAATTTATAGCCCTGTTA
GTGTATGTCACAGGAAAGCCAATTCAGCCAAGTTGACGGGAAGGCTAGCA
AACCAAACTGAACCTCTGCCATACTACATATGGGCCTGACAGTTCCAGGC
TGCAGTACTTTCATGGATTACTAGATGGCGCTTCAGTACCGCAGAAATGC
AGAATTCCAATAAAAGCATAACTTCCTGACCATGGTGTCAATTTTTGAAC
ACCATGTTCCTGACATAGATAGGTCTCAATAAAAACACATAATGCGCACA
AATAATGTCAACTACTTTCAATTTTTCAGACACTGACACTAAAATACAAA
CCTGTCTGTATTTGACATCATATAATGTGTACTTAATATTTCTACAAATT
CTAGTGGACTTGACTTGATAGGAAGTCTCTCCAGAGCAGACCAGTCATTT
TCCATGGTCTGTTCCTCTACACAGCTATGTTCGTGTAGTCTGTTTGTCCT
CATGCCAACCACATTCCCGATTGTACACAGTTTAGGTCATTTATCTGAAA
TAACCAGAACAGATATGTTAGCTAGTCTAGAATGTTATGATAAACTGTGC
AAAAAGGGCAGAATTGGAGAATTTTATTTAGGCCCAAATCACTATGTATG
TGTGCCCTTTTGGCGACATGGCATTCCTGGATGTTCACACCCGGTCAAGT
TTATTTCCTTGGCAATAAAATATTTATAGTCCC Coding sequence (CDS) from alignment at Sc0000270:257173..259205+ >transcript:BL80920_cuf0 ID=transcript:BL80920_cuf0|Name=transcript:BL80920_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=411bp|location=Sequence derived from alignment at Sc0000270:257173..259205+ (Branchiostoma lanceolatum)
ATGCCAATGTTACTTGAACTGAGTGGAACTGTGACGTCACCAACGGGTCA
AGAGGCAGTAATGAAAATAATAATGGTTTATTGGTCAGAAATTACCCGTG
CAATGGCAGCCAGTGCTGAATTGCTGCAGGGTTTACAATCACATTGTACT
CAACAGATACATAGTTGCTCCACACTTGTCGCAAGGGTCTGGGCTAATGC
CATTCGGCGCCACCAGGTGACCTCAATACGACCTTCCCCAACCGAAGTCA
GGTACTCATTCACACCTGGATGGAGTGAGGAAAGGCGTATAAAGTGCCTT
TCCCAAGGGCACAACTTCGGAGCATACCAATGGTTTCGAACCCGGGGCCT
CTCGGTTCTGGGCGAAACACCCTACCGTTTGCACCACACGACGCCACTAA
ATCTACCTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000270 | genome | Sc0000270:257173..259205 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL80920_cuf0 |
| Biotype | protein_coding |
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