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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL81144_cuf0 >transcript:BL81144_cuf0-protein ID=transcript:BL81144_cuf0-protein|Name=transcript:BL81144_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=174bp
MHHNMLIITQCSYLLKXNVSVMTVLHDKVDKKEVRELCDWMIKNAEPYRN
QAGWLRGRFAMLRYEDVGMEPILTMEKLYNFIGVAPKTEVSKWLERHVHA
AKRRKDRENPFGTKKDPVKTSNEWRTRLSINQVNTIQSQCKKAMELFHYQ
TVKTKEELRKMSFNLYSKRYSLIP Run BLAST on NCBI mRNA from alignment at Sc0000034:62639..65426+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL81144_cuf0 ID=transcript:BL81144_cuf0|Name=transcript:BL81144_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2788bp|location=Sequence derived from alignment at Sc0000034:62639..65426+ (Branchiostoma lanceolatum)
TGAACATAAAACCACCGCGAACAATAGCCATGCTTGGAGATCAATCGGAC
GTACTGTGTGGGCTGTTTTCTGGGAATTTTGTGGCGTTTTGCGTCTCTAG
ATGGAGATGGAACAGATAAAAAAGTGTGTCATTAGAGAGAGGGAGACATA
AAAGAACAAGAAAACCGCCACATTAGACCCTGGAAAAACAAGCCTGACCG
ATACATCTGCTTGGAGATTAGATAACAATACATCACTAACTAGAGTTCCA
CGACCCCAAACCTTCGCCAAATGATCTTAAACTGGGACAGGTCGTTCCCT
GGGAACAACCATAACCATAAACCAATGTAGATACTCCCTGCTGTCCTCTG
CCAGGACTTTGAAAGCTGAATTGACCCCTAGACCACATAAACTAATTAAT
TTATTGGGTCATTTTATAGTGGAACCTCCCTCTTTAACTTCTACGAATGA
TGTACTATACAGCATTCCCTCACATATTAAGCAAATTATGTTCTCCTTTG
CATAATTGATACATAAATTGACGTTCCTCTCTATGTCAGTTACAGTTCTC
AGTTCATATATTTGAAGCCCCGTCAAGAAATAAAGATGTGCCCATCTGTT
GACCCGAATTCCAGCCGTAGTCACAATTTCCATATGGTGTCCTAGTATAT
CGCACATTGAAATAGAATTTCAACTTTTCCTCATCAATCATGTAAATGAG
GCCCATATTTCCTCAAAATGCATCACAATATGTTAATCATCACCCAATGT
TCCTACCTGCTGAAAANGAACGTTTCCGTTATGACTGTCCTTCACGACAA
GGTCGACAAGAAAGAAGTAAGGGAGCTCTGTGATTGGATGATAAAAAATG
CGGAGCCATACAGAAACCAAGCCGGTTGGTTACGTGGGCGATTCGCGATG
CTTCGATACGAGGATGTCGGGATGGAGCCAATCCTCACCATGGAGAAGCT
GTATAACTTCATCGGCGTGGCTCCCAAAACTGAAGTCTCTAAATGGCTTG
AACGTCACGTTCATGCCGCGAAGAGGCGAAAGGACAGAGAAAATCCCTTT
GGAACAAAGAAAGATCCCGTAAAGACGTCCAATGAGTGGAGAACGCGACT
TAGTATCAATCAGGTAAACACCATTCAGTCCCAATGTAAGAAAGCGATGG
AACTATTTCATTATCAAACGGTCAAGACGAAAGAAGAGCTGAGAAAAATG
TCTTTCAATCTTTACAGTAAACGATATTCTCTAATTCCCTAATTCTTCGG
TTCTTTGAACAAAAATTTAGACTTACTAAGAATATGCTGTGTCTGTCAAA
AAGTCATGAAACGCATTAGAAGTATAAAATTTGATATGTAAACTACGACG
CAGTCATAATGAGGTCTGACCTGCATAAATGGTGTACAAAAATAGCACCG
CCCCTAAGTCGTCGCCAAAAATAGTGTGCACGAGTATGCATCATATGTGT
TATGTTCAATAATCTTATCAAATCTATTTTGACTCAAGTCAATCCATGAC
TTTATACTTTCAAGTATTCTCATAATTAGACTGTTTCCTTAAATTAATAT
TGTATTCCACATTATTCCACTATTTAAAGTGTAGAATGTATTCTATTGTT
TGTTCTCTGAATAAATCTGCTGTTGTATTAATGATACTTCTAATTAACAA
AAACACGAAACATCTACACGTACTTTATGTGTTGATTTAAGGAGAACTGT
TGTAGATAGATACGTCTTGTCTTGCTTTCTATTGATTCCATTAAACCTCA
ATGAATGCAACACATCGCAATGTGGTGGCGTTCTTATGTATAGTTGTTTT
GGCACAGCGTAGAAATACCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAACCCCCCCCCCCCCCCC
CCGGCAAGGCAAGCCGGCAAAAAGGTCAGTCCGGTCGTATTCTGAAAGAC
AGTGTTGTTTGTGATCACCCACACGTAAAGTACTCCTCAGTTAAACACGT
AAAACTAATGTACATACCCTGTACTTTTATATGACTCTGGTGTTGTTTTT
GTCGTCATTGTCTTGTAGTTACCAGTACTACTTTTTGTATTCTTTAACCT
TCTCCCTGCTGCCTAACTCTGTAACTAAAAGAAAATGGGGTGCCAAACAG
CTACTTCAGCGTACGCGTGCTATAGGTTAAAGTGAAATGTGAGGCTTTTC
TGATGGTCTGTGATTTCTGTTTGTCCAAGGTTATCTTCTTCGTTTTTGTT
ATGCCCGTTTGAAATCTCGAGTGACACTTATTAAAATCTTCCTTGACGTT
TTTAAGAATCAAAGTGACAAGAACAGGTCAGAAGGCAAGGTCAACAACTG
ACCTTTTGTTTATACGACTTATAATATATAGTAGTACACACGTATCATGC
TGGGAATTGGTATACTTTACAGGTACAGGGGTTGAAGCTACACATGTTTA
GTTTAATGTATGTATCATGTATCATATTGGTGTCCTATAAGCCCATAGGG
GCTGGGTGCATAAAGCGCAGGACACGAAAATAAAATACCATTCATTCATA
TCATATTCATTCATTCATTCATTCATTCAATCATTCATTGTATATGGCCG
GTGTTGCGGGCCGGAATATACTTCTGACCAGAGATCTATTTTGGCTCGCT
ACACCGGCCATAGAAGTTTAACTAAGCAGCAGCAGTTTTAAGAACCAAGA
TATCAAAGAAATGTGATATTTTAGCAAACTAGAGTACATTTTATTCCAAT
TCACCTTAGAATATCAATTAATATGCAACACGTCTGAC Coding sequence (CDS) from alignment at Sc0000034:62639..65426+ >transcript:BL81144_cuf0 ID=transcript:BL81144_cuf0|Name=transcript:BL81144_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=525bp|location=Sequence derived from alignment at Sc0000034:62639..65426+ (Branchiostoma lanceolatum)
ATGCATCACAATATGTTAATCATCACCCAATGTTCCTACCTGCTGAAAAN
GAACGTTTCCGTTATGACTGTCCTTCACGACAAGGTCGACAAGAAAGAAG
TAAGGGAGCTCTGTGATTGGATGATAAAAAATGCGGAGCCATACAGAAAC
CAAGCCGGTTGGTTACGTGGGCGATTCGCGATGCTTCGATACGAGGATGT
CGGGATGGAGCCAATCCTCACCATGGAGAAGCTGTATAACTTCATCGGCG
TGGCTCCCAAAACTGAAGTCTCTAAATGGCTTGAACGTCACGTTCATGCC
GCGAAGAGGCGAAAGGACAGAGAAAATCCCTTTGGAACAAAGAAAGATCC
CGTAAAGACGTCCAATGAGTGGAGAACGCGACTTAGTATCAATCAGGTAA
ACACCATTCAGTCCCAATGTAAGAAAGCGATGGAACTATTTCATTATCAA
ACGGTCAAGACGAAAGAAGAGCTGAGAAAAATGTCTTTCAATCTTTACAG
TAAACGATATTCTCTAATTCCCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000034 | genome | Sc0000034:62639..65426 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL81144_cuf0 |
| Biotype | protein_coding |
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