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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL81275_cuf0 >transcript:BL81275_cuf0-protein ID=transcript:BL81275_cuf0-protein|Name=transcript:BL81275_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=119bp
MHKYQPRFHIVKTNDIMKLPYCHFRTYVFRETAFIAVTAYQNEKVCYFPS
LFPTSHRYVPPAQALSSDQRSPKINNVSLRLRKEKPLFFHGSLRQVRASQ
IKETDKKWRKVTSNPEGLL Run BLAST on NCBI mRNA from alignment at xfSc0004363:17..1650- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL81275_cuf0 ID=transcript:BL81275_cuf0|Name=transcript:BL81275_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1634bp|location=Sequence derived from alignment at xfSc0004363:17..1650- (Branchiostoma lanceolatum)
AAACTATTGAATTTGATCTTTATTGGTGAACACAATGGGGCACACGCCTC
TGTTATAGTTTTGTGGAGTTATCTTTTTCCATTGTCGTGTAAATTTCATT
CTCAAACAGCGGCGGCCCGTGTAGGTTTCACTCGGTTTATCTTTTGGCTC
TTCTCGAAACGAGAGAGCCCCCGACTCGCCAGACCGAGCTGTTTTCTTTA
CATTCCCCGCCTACATTTCAAGCTCGTGTGCTTGTTAATTGTCTTCGCGA
GAGCTTATTGGCGCCAGTGCTCTGACTCCTAGCCTCCATTTATATTGTTT
TTCTCTCGCCCACTCTCAGACAATTCTCAATTCGATGCATAAATACCAGC
CGCGGTTCCACATCGTGAAGACCAACGACATCATGAAGCTTCCTTACTGT
CACTTCCGCACCTACGTCTTCAGAGAAACGGCGTTTATCGCAGTTACAGC
CTACCAGAACGAGAAGGTATGTTATTTTCCAAGTCTTTTTCCTACTTCCC
ACCGCTACGTACCGCCAGCCCAGGCGTTATCGTCCGACCAGAGAAGCCCG
AAAATTAATAATGTATCGTTGCGACTGAGGAAAGAAAAGCCCTTATTTTT
TCACGGGTCTTTGCGGCAAGTCAGGGCAAGTCAAATTAAGGAGACGGATA
AGAAGTGGAGAAAGGTAACAAGCAATCCGGAGGGCCTACTGTGATATTTT
CCTTTGTCGGTAGCTTGTTTTGCGAACACCCAACGCTGGCACAATGTGGC
ACGCTTGTATTACTGGATGTCATGCACGTTATTAGATTATGATATTTCGT
CTGGCGCTTGCTGGCAGACAAAATGAATAGGACGGGGTGTTGTAGTCGGT
GGTGCTCGTTATCTTGCCTAACGGGACAGGATGCCTTTCGAGGTGCTCCT
CTCGGGTCGCTGTCAGTTCTCTTTGCGCAGCCAACCAATTTGTGCACGAA
ATTGAAGAAAATGTTGCTTATTTGGCGGCTCCCGGCGAGAAAGATGGAAA
CCGACACCGGCCTTTGTTGGTCGCCCGGCTCAAAGCGTGTTTTTGAACTT
GGAGAACAGCATTGTTGTCGACGTCATATTTAGAAACAACAAAGTGTGCT
AAACAGTACGGGTTCCCCTCGTACAATAAGCAAGGTACATAATAGGAGGT
GCATGTTTTCTTTTGTGTCCGCGCGGGCTTTGTTAGCTTCTAACGAGGTG
TCTGGGACATTTCAATGTCATTATTCCATTGTTCCTAGTCCGTCCACCGA
TGTGTCTCTGAGCTTGTTTAGGCTCTTGAACAGAACCATGTCGCCTTTCT
CATCAGCTATGGAAATATAAGCCCCTCAGAATCCTATTAAAACCGTTTCA
TAATAGGGAGCAGTGAAAGGTGGTAGCCGACACCACTAACATCTGGTCTT
GACGGTGGTCCAATAGAAAATAACAAGATGTTTTGCTGTTCTGTCTGTAC
AAGTAAAGTACAAAAACGACAACGCTTATTGTTCTCTAAATACTTAAATC
ACACGTGTTGTTCCTACAAGCAGCTGTTCAATACATGCAAAGAAACGGAG
ACTGATGATGAAATTATCACAATGTCAAAATGATTCGGGCAGATTCGGCG
AAGCGGTGCGAACATTGTAAGTTTTACGACACGC Coding sequence (CDS) from alignment at xfSc0004363:17..1650- >transcript:BL81275_cuf0 ID=transcript:BL81275_cuf0|Name=transcript:BL81275_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=360bp|location=Sequence derived from alignment at xfSc0004363:17..1650- (Branchiostoma lanceolatum)
ATGCATAAATACCAGCCGCGGTTCCACATCGTGAAGACCAACGACATCAT
GAAGCTTCCTTACTGTCACTTCCGCACCTACGTCTTCAGAGAAACGGCGT
TTATCGCAGTTACAGCCTACCAGAACGAGAAGGTATGTTATTTTCCAAGT
CTTTTTCCTACTTCCCACCGCTACGTACCGCCAGCCCAGGCGTTATCGTC
CGACCAGAGAAGCCCGAAAATTAATAATGTATCGTTGCGACTGAGGAAAG
AAAAGCCCTTATTTTTTCACGGGTCTTTGCGGCAAGTCAGGGCAAGTCAA
ATTAAGGAGACGGATAAGAAGTGGAGAAAGGTAACAAGCAATCCGGAGGG
CCTACTGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0004363 | genome | xfSc0004363:17..1650 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL81275_cuf0 |
| Biotype | protein_coding |
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