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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL81415_cuf0 >transcript:BL81415_cuf0-protein ID=transcript:BL81415_cuf0-protein|Name=transcript:BL81415_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=185bp
MAALSLALCKKTHLYGYWPFPVDHMCIGWRPSPYVSLAIGSYSCVSSDDN
TVGVGPLVALSINSGRSRVNLGPLTACSGTAGAFLLNFFHCYLLSAGLVL
TALSLALCKETHLYGYWPFPVRLLALSGGLRGKGGSLPLLHVRRRTQAKQ
HLPQTTGRVQDLTEPAQNRCYKTPRRKVRQKTLGM Run BLAST on NCBI mRNA from alignment at Sc0000060:131699..134156+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL81415_cuf0 ID=transcript:BL81415_cuf0|Name=transcript:BL81415_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2458bp|location=Sequence derived from alignment at Sc0000060:131699..134156+ (Branchiostoma lanceolatum)
TCATATTTCCTCATCATATTTCCTCATCATATTTCCTCATCATATTTCCT
CATCATATTTCCTCATCATATTTCCTCATCATATTTCCTCATCATATTTC
CTTACCATATTTCCTCATCATATTTCCTCATCATATTTCCTCATCATATT
TCCTTACCATATTTCCTCATCAGATTTCCTCATCAGATTTCCTCATCAGA
TTTCCTCATCATATTCACGTCATCATATTTCCTTATCATATTTCCTCATC
ATATTTCCTCACCATATTTCCTTATCATATATTCTAATCACGTAGAAGAG
GGTTGATAGTGAAGGCTCCTAACGTGTTAAAAGTTCTTGTCTAGACCATG
TTCAGACGTGTTTTGTTTATGTCTCGGGGTCTTTGACTTTGAGCTATTAT
CCACAATGCGTCACACTAGTACTGCGCATGTCCAGTTCAAACCGCAAACT
GGCTAATAGCTCTAGTCACACAAAGGAACACTACGCCAATGGAAAACTAA
AGTAATGATAAATCATATAGCTGTCGCAGCACAGTGTTTATATGGTTATA
AATAGTAAGAAGTAATTCTTTGAGGTCAAAGTTAAAGTCCCTTCCACACC
GTATGTGTATAGGGCGGCGCCCATCTCCACTTCCTTACTTCTTGGGCTAG
CTCATTTGATAATACAGGAGGGGCCTGTGTTCAACTAACTTAGTATAAAC
TCAGAAAGAAGTAGTGTAGGTTTAGGTCCCCTTAACAGCTTGCTCTGGAA
CTGCAGGGCATTTTTGTTAATTTTCTTAATTGTTATGATCTCTCTGTAGG
CCTTATGGCAGCACTCTCCCTAGCCCTGTGTAAGAAGACCCACCTGTATG
GTTATTGGCCCTTCCCTGTGGACCATATGTGTATAGGGTGGCGCCCATCT
CCGTACGTTTCCTTAGCTATTGGGTCATACAGCTGTGTTAGCTCAGATGA
CAATACAGTAGGGGTTGGTCCACTGGTAGCACTGAGTATAAACTCGGGAA
GAAGTCGTGTAAATTTGGGTCCCCTAACAGCTTGCTCTGGAACTGCAGGG
GCATTTTTGTTAAATTTTTTTCATTGTTATCTTCTCTCTGCAGGCCTTGT
CCTGACAGCACTCTCCCTAGCCCTGTGTAAGGAGACCCATCTGTACGGCT
ACTGGCCCTTCCCGGTNCGGCTACTGGCCCTTTCCGGTGGACTACGAGGG
AAGGGAGGTTCCCTACCACTACTACACGTACGACGCCGAACACAAGCAAA
ACAACACCTTCCACAAACTACCGGAAGAGTTCAAGATCTTACAGAACCTG
CACAGAACCGGTGTTATAAAACTCCACGTAGGAAAGTGCGACAAAAAACA
TTAGGCATGTAACGTTGGTAAAATAATTAGTTCGTAGGTTCATGTGTATC
ATGAACTGTAACGTTAGTAGTAGTAGTAGTAGTAGTAGAAGTAGTAGAAG
TAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTACGTGCACAG
GTCAGCACTGGCCCCTTGCTATGGGTTATACCGCCCTTTTTACGGGTTAG
ATATTTGTTTATATGGTATAACTTCCTTGCGTCTATAGCGTCACATATAT
GATTTCTTTCTATATTCTCTAGTGTATCATTGTACGTGTATATGGATATT
TGTTTATCTGCATTTATCAATTAGTATAACCATGTATTATAGCAGCATGT
ACATGTTTCACCATCAACCGAATGAACGAACCGTGTGCTCCGTTTACTAT
ATGTCCGTATTCTGCACGGTATCATACGATCGGCTACCGATGGTGTCCGA
GGATTACCGAAGCTAATCAGCGAGTTCCGACAGAGGCCGAACACCTGAAT
ATTACGTTATGCGTGATACATTATATACGCGTCTATGTATAAAATTCTTA
AAATGGATAAAAGGACCAAATAACTATGTGTACATGTCATGACAAATGTA
TAAACATATGTATACCGAAATGTTAGGATCCCTGCATTGTAGATTAAGGA
CACTAGTACATACAAAACTATCTATAAGTAGTCTGTGTCACATACTAAGT
ATTCAGGACCTTCCCATGACTTTCCTCCCGACCATTCCCCAACCAAGGTC
GGCGTTGGTTCGAGAGTAGCTTGGAATCCATCCTGTCCTAGTTTACTCCA
CGCACTGATCGCATACAAGTAGAATAAGACTTTCCCGACTTTAATTTTTC
AAAATTCATACACTATTTGTGACAGTAAAGCCGACCTAGTCGATGACCTT
GCCACGAACGACTCCCGTTAGCTAGCGGGCGCAGACACGACCTTTCCGGC
ATAAGAATATGTTGAAAATCGCGAATCGGTGATTCCCTAACCCCACCCCC
ACTCCCCAGCAATAAACGCCAGCGCTCATGGAAGGCCGCGTGTGGCTATG
TGTGACAGGTTTTTTTGCACAATCACACACAGCTCACGTCCGCAGTGACA
TACCAGAC Coding sequence (CDS) from alignment at Sc0000060:131699..134156+ >transcript:BL81415_cuf0 ID=transcript:BL81415_cuf0|Name=transcript:BL81415_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=558bp|location=Sequence derived from alignment at Sc0000060:131699..134156+ (Branchiostoma lanceolatum)
ATGGCAGCACTCTCCCTAGCCCTGTGTAAGAAGACCCACCTGTATGGTTA
TTGGCCCTTCCCTGTGGACCATATGTGTATAGGGTGGCGCCCATCTCCGT
ACGTTTCCTTAGCTATTGGGTCATACAGCTGTGTTAGCTCAGATGACAAT
ACAGTAGGGGTTGGTCCACTGGTAGCACTGAGTATAAACTCGGGAAGAAG
TCGTGTAAATTTGGGTCCCCTAACAGCTTGCTCTGGAACTGCAGGGGCAT
TTTTGTTAAATTTTTTTCATTGTTATCTTCTCTCTGCAGGCCTTGTCCTG
ACAGCACTCTCCCTAGCCCTGTGTAAGGAGACCCATCTGTACGGCTACTG
GCCCTTCCCGGTNCGGCTACTGGCCCTTTCCGGTGGACTACGAGGGAAGG
GAGGTTCCCTACCACTACTACACGTACGACGCCGAACACAAGCAAAACAA
CACCTTCCACAAACTACCGGAAGAGTTCAAGATCTTACAGAACCTGCACA
GAACCGGTGTTATAAAACTCCACGTAGGAAAGTGCGACAAAAAACATTAG
GCATGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000060 | genome | Sc0000060:131699..134156 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL81415_cuf0 |
| Biotype | protein_coding |
|
