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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL82367_cuf0 >transcript:BL82367_cuf0-protein ID=transcript:BL82367_cuf0-protein|Name=transcript:BL82367_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=563bp
LISLLLKKDSKGIDKDPTAMGNWRPLTLLGCDTRILSKCISLRIKHVITD
IIEQDQTGFIKDRYIGDNIRRLIDTIEHYDQESKPGLIFVADFKKAFDTL
RWDFMFKALEFFNFGPQLITWVKVLYEKTTSCVINSGYISDPFILSRGVR
QGCPLSPYLFLMAVEILAIKIRSNPSIRGLKIYEKITKISQYADDSNFPF
EPKLESFYALLSDLERFSNISGLSLNVDKCKILRLGPLKSTNFRLPTHLP
IQWVDGDVDLLGINIPVDLNLITSVNFEPRLERLDRLLRPMKNKYLSLYG
KIVIINTLVVPQFTNLFQVLPSPNDSFFKVYEKKIFSFIWDNGPERVARR
VLYNTSENGGLNLKNLRAFNTSIKASWVPKLYSHPEWFSSWVTVFHPQLN
HSLFPFYQLSSVINLCLKGFFSEVFMSWFQFQHVEPTTPANIRQQVICLN
SNIIIDGKTVCLTAFMNRNIYFINDLLSPDGNFMSYDEFSTNFPNACDQH
RYLQLISAIPGKWKKLLSTEKRKDLVCLPFQKNYKWLRNIKINKSMYIYF
LTSMNEVSLAHNT Run BLAST on NCBI mRNA from alignment at Sc0000232:202570..204260+ Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL82367_cuf0 ID=transcript:BL82367_cuf0|Name=transcript:BL82367_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1691bp|location=Sequence derived from alignment at Sc0000232:202570..204260+ (Branchiostoma lanceolatum)
CTTATTTCATTGCTACTAAAAAAAGACAGTAAAGGTATAGACAAGGACCC
AACTGCCATGGGGAATTGGCGCCCCCTTACCCTTTTAGGTTGTGACACAA
GAATACTTTCCAAATGCATATCTTTGAGAATCAAACATGTAATTACGGAC
ATAATTGAACAGGATCAGACAGGGTTTATTAAGGATAGGTATATAGGCGA
CAATATTAGAAGACTAATAGACACAATAGAACATTACGATCAAGAGAGTA
AACCTGGGTTAATATTTGTAGCTGATTTTAAAAAAGCATTTGATACGTTA
AGGTGGGATTTTATGTTTAAAGCTTTAGAATTTTTCAATTTTGGTCCACA
GTTAATTACATGGGTAAAGGTCTTATATGAAAAAACAACGAGTTGCGTCA
TAAACAGCGGTTATATTTCAGACCCCTTCATTTTAAGTCGCGGAGTTCGC
CAAGGATGTCCATTGTCCCCATATCTTTTTCTCATGGCGGTTGAGATTCT
TGCTATTAAGATTAGGTCTAATCCTTCTATTCGGGGCTTAAAGATATATG
AAAAGATTACAAAGATATCGCAGTACGCCGACGATTCAAATTTTCCATTC
GAACCAAAGCTAGAATCATTTTATGCCTTGTTGTCTGATTTAGAGCGTTT
TTCCAATATCTCAGGTCTTTCTTTGAATGTAGATAAATGCAAAATATTAC
GATTAGGTCCCTTAAAATCCACGAATTTTCGTTTGCCCACTCATCTACCG
ATACAGTGGGTTGACGGGGATGTTGACCTACTGGGTATCAATATTCCCGT
TGATTTAAATTTAATTACAAGTGTTAATTTCGAACCCCGATTGGAGAGAT
TAGATAGACTATTGCGACCTATGAAGAATAAATATCTGTCCCTGTATGGT
AAAATTGTTATTATTAACACTTTGGTGGTTCCCCAATTTACAAATCTATT
TCAAGTCTTACCATCCCCTAACGATTCCTTTTTCAAAGTATATGAAAAGA
AGATATTTTCTTTTATTTGGGACAACGGTCCTGAACGAGTTGCACGGAGG
GTTTTATACAATACATCGGAAAATGGAGGACTAAACTTAAAAAACTTACG
CGCGTTCAACACTTCTATAAAAGCTTCATGGGTACCTAAACTTTATTCTC
ATCCCGAATGGTTTTCCTCCTGGGTAACAGTCTTCCATCCTCAACTTAAT
CATAGTTTATTTCCTTTTTACCAGCTGTCCTCGGTGATAAACCTTTGTTT
AAAAGGATTTTTTTCTGAAGTTTTTATGTCCTGGTTTCAATTTCAGCACG
TAGAGCCCACGACGCCGGCAAATATACGACAACAAGTAATTTGTTTAAAC
TCTAATATTATTATTGATGGTAAAACTGTTTGTTTGACAGCTTTTATGAA
TAGGAATATATATTTCATAAATGACTTGCTGTCCCCGGACGGCAATTTTA
TGTCTTATGATGAATTCAGTACAAATTTCCCAAATGCTTGTGACCAACAT
AGATATCTACAGCTTATTTCAGCTATTCCCGGTAAATGGAAAAAACTACT
TAGTACTGAGAAGCGTAAAGACCTTGTGTGCCTGCCCTTTCAAAAAAATT
ATAAATGGTTACGAAATATAAAAATCAATAAAAGCATGTATATCTACTTT
CTTACGTCCATGAACGAGGTCAGCCTTGCACACAATACTAG Coding sequence (CDS) from alignment at Sc0000232:202570..204260+ >transcript:BL82367_cuf0 ID=transcript:BL82367_cuf0|Name=transcript:BL82367_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1689bp|location=Sequence derived from alignment at Sc0000232:202570..204260+ (Branchiostoma lanceolatum)
CTTATTTCATTGCTACTAAAAAAAGACAGTAAAGGTATAGACAAGGACCC
AACTGCCATGGGGAATTGGCGCCCCCTTACCCTTTTAGGTTGTGACACAA
GAATACTTTCCAAATGCATATCTTTGAGAATCAAACATGTAATTACGGAC
ATAATTGAACAGGATCAGACAGGGTTTATTAAGGATAGGTATATAGGCGA
CAATATTAGAAGACTAATAGACACAATAGAACATTACGATCAAGAGAGTA
AACCTGGGTTAATATTTGTAGCTGATTTTAAAAAAGCATTTGATACGTTA
AGGTGGGATTTTATGTTTAAAGCTTTAGAATTTTTCAATTTTGGTCCACA
GTTAATTACATGGGTAAAGGTCTTATATGAAAAAACAACGAGTTGCGTCA
TAAACAGCGGTTATATTTCAGACCCCTTCATTTTAAGTCGCGGAGTTCGC
CAAGGATGTCCATTGTCCCCATATCTTTTTCTCATGGCGGTTGAGATTCT
TGCTATTAAGATTAGGTCTAATCCTTCTATTCGGGGCTTAAAGATATATG
AAAAGATTACAAAGATATCGCAGTACGCCGACGATTCAAATTTTCCATTC
GAACCAAAGCTAGAATCATTTTATGCCTTGTTGTCTGATTTAGAGCGTTT
TTCCAATATCTCAGGTCTTTCTTTGAATGTAGATAAATGCAAAATATTAC
GATTAGGTCCCTTAAAATCCACGAATTTTCGTTTGCCCACTCATCTACCG
ATACAGTGGGTTGACGGGGATGTTGACCTACTGGGTATCAATATTCCCGT
TGATTTAAATTTAATTACAAGTGTTAATTTCGAACCCCGATTGGAGAGAT
TAGATAGACTATTGCGACCTATGAAGAATAAATATCTGTCCCTGTATGGT
AAAATTGTTATTATTAACACTTTGGTGGTTCCCCAATTTACAAATCTATT
TCAAGTCTTACCATCCCCTAACGATTCCTTTTTCAAAGTATATGAAAAGA
AGATATTTTCTTTTATTTGGGACAACGGTCCTGAACGAGTTGCACGGAGG
GTTTTATACAATACATCGGAAAATGGAGGACTAAACTTAAAAAACTTACG
CGCGTTCAACACTTCTATAAAAGCTTCATGGGTACCTAAACTTTATTCTC
ATCCCGAATGGTTTTCCTCCTGGGTAACAGTCTTCCATCCTCAACTTAAT
CATAGTTTATTTCCTTTTTACCAGCTGTCCTCGGTGATAAACCTTTGTTT
AAAAGGATTTTTTTCTGAAGTTTTTATGTCCTGGTTTCAATTTCAGCACG
TAGAGCCCACGACGCCGGCAAATATACGACAACAAGTAATTTGTTTAAAC
TCTAATATTATTATTGATGGTAAAACTGTTTGTTTGACAGCTTTTATGAA
TAGGAATATATATTTCATAAATGACTTGCTGTCCCCGGACGGCAATTTTA
TGTCTTATGATGAATTCAGTACAAATTTCCCAAATGCTTGTGACCAACAT
AGATATCTACAGCTTATTTCAGCTATTCCCGGTAAATGGAAAAAACTACT
TAGTACTGAGAAGCGTAAAGACCTTGTGTGCCTGCCCTTTCAAAAAAATT
ATAAATGGTTACGAAATATAAAAATCAATAAAAGCATGTATATCTACTTT
CTTACGTCCATGAACGAGGTCAGCCTTGCACACAATACT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000232 | genome | Sc0000232:202570..204260 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL82367_cuf0 |
| Biotype | protein_coding |
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