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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL82369_cuf0 >transcript:BL82369_cuf0-protein ID=transcript:BL82369_cuf0-protein|Name=transcript:BL82369_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=315bp
MSWFQFQYVEPTTPANIRQQVICLNSNIIIDGKTVCLTAFMNRNIYFIND
LLSPDGNFMSYDEFSTNFPNACDQHRYLQLISAIPGKWKKLLSTEKRKDL
VCLPFQKNYKWLRNIKINKSMYIYFLTSMNEVSLAHNTRLSWFYYFDKPI
PWRDVFTNLYRCTIDPSTRYFQYRLINEFLPCKKILHIWKLIDSSSCSFC
HDDVESYIHIFWECPHVVSFWNDVKNWLKVETSIECYLNSFIIIFGDTCN
DAPPLKNLIILLGKVFIFRCRRLKIINFQAFKRLISTFEKTERLIASRRG
KLEKHRGKWGTLCLI Run BLAST on NCBI mRNA from alignment at Sc0000232:212793..214676+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL82369_cuf0 ID=transcript:BL82369_cuf0|Name=transcript:BL82369_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1884bp|location=Sequence derived from alignment at Sc0000232:212793..214676+ (Branchiostoma lanceolatum)
ATCTCAGGTCTTTCTTTGAATGTAGATAAATGCAAAATATTACGATTAGG
TCCCTTAAAATCCACGAATTTTCGTTTGCCCACTCATCTACCGATACAGT
GGGTTGACGGGGATGTTGACCTACTGGGTATCAATATTCCCGTTGATTTA
AATTTAATTACAAGTGTTAATTTCGAACCCCGATTGGAGAGATTAGATAG
ACTATTGCGACCTATGAAGAATAAATATCTGTCCCTGTATGGTAAAATTG
TTATTATTAACACTTTGGTGGTTCCCCAATTTACAAATCTATTTCAAGTC
TTACCATCCCCTAACGATTCCTTTTTCAAAGTATATGAAAAGAANTTATT
ATTAACACCTTGGTGGTTCCCCAATTTACAAATCTATTTCAAGTCTTACC
ATCCCCTAACGATTCCTTTTTCAAAGTATATGAAAAGAAGATATTTTCTT
TTATTTGGGACAACGGTCCTGAACGAGTTGCACGGAGGGTTTTATACAAT
ACATCGGAAAATGGAGGACTAAACTTAAAAAACTTACGCGCGTTCAACAC
TTCTATAAAAGCTTCATGGGTACCTAAACTTTATTCTCATCCCGAATGGT
TTTCCTCCTGGGTAACAGTCTTCCATCCTCAACTTAATCATAGTTTATTT
CCTTTTTACCAGCTGTCCTCGGTGATAAACCTTTGTTTAAAAGGATTTTT
TTCTGAAGTTTTTATGTCCTGGTTTCAATTTCAGTACGTAGAGCCCACGA
CGCCGGCAAATATACGACAACAAGTAATTTGTTTAAACTCTAATATTATT
ATTGATGGTAAAACTGTTTGTTTGACAGCTTTTATGAATAGGAATATATA
TTTCATAAATGACTTGCTGTCCCCGGACGGCAATTTTATGTCTTATGATG
AATTCAGTACAAATTTCCCAAATGCTTGTGACCAACATAGATATCTACAG
CTTATTTCAGCTATTCCCGGTAAATGGAAAAAACTACTTAGTACTGAGAA
GCGTAAAGACCTTGTGTGCCTGCCCTTTCAAAAAAATTATAAATGGTTAC
GAAATATAAAAATCAATAAAAGCATGTATATCTACTTTCTTACGTCCATG
AACGAGGTCAGCCTTGCACACAATACTAGACTTTCTTGGTTCTATTATTT
TGACAAACCTATACCATGGCGAGATGTATTTACAAACTTATATAGATGTA
CTATTGATCCAAGTACTAGATATTTTCAATACCGATTAATTAATGAATTT
TTACCTTGTAAAAAAATTCTACATATATGGAAATTAATAGACTCTAGCTC
TTGTTCTTTCTGTCATGACGATGTAGAATCCTATATTCATATTTTCTGGG
AGTGTCCGCATGTAGTATCATTTTGGAACGATGTAAAAAATTGGTTGAAA
GTAGAAACTTCTATAGAGTGCTACCTAAATTCCTTTATTATCATATTTGG
AGATACATGTAACGATGCGCCCCCCCTGAAAAATTTGATTATTTTGTTAG
GTAAAGTTTTCATCTTCCGGTGTAGACGCTTAAAAATAATAAACTTCCAG
GCCTTTAAAAGACTAATATCTACTTTTGAAAAAACTGAACGTCTCATTGC
ATCTCGGAGAGGGAAGCTGGAGAAGCATCGGGGTAAGTGGGGAACTTTGT
GTTTAATTTGATTTTGAAATGTAGAAATAATCATGAAAGAATATAGAAAT
GACATGATAATGATATTTGATTACAATACTGAAATGATTATGCGAGTAAT
GATACAATGCTTATATGAAAAGATGATATGTAATGTGATAAAATGATATG
TAATGATTTCATAACCAATATGAATAACGTTAGTAATGACATAATAATAA
TCATATTATATGAGCTGTTAAGTTTACAATGTGG Coding sequence (CDS) from alignment at Sc0000232:212793..214676+ >transcript:BL82369_cuf0 ID=transcript:BL82369_cuf0|Name=transcript:BL82369_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=948bp|location=Sequence derived from alignment at Sc0000232:212793..214676+ (Branchiostoma lanceolatum)
ATGTCCTGGTTTCAATTTCAGTACGTAGAGCCCACGACGCCGGCAAATAT
ACGACAACAAGTAATTTGTTTAAACTCTAATATTATTATTGATGGTAAAA
CTGTTTGTTTGACAGCTTTTATGAATAGGAATATATATTTCATAAATGAC
TTGCTGTCCCCGGACGGCAATTTTATGTCTTATGATGAATTCAGTACAAA
TTTCCCAAATGCTTGTGACCAACATAGATATCTACAGCTTATTTCAGCTA
TTCCCGGTAAATGGAAAAAACTACTTAGTACTGAGAAGCGTAAAGACCTT
GTGTGCCTGCCCTTTCAAAAAAATTATAAATGGTTACGAAATATAAAAAT
CAATAAAAGCATGTATATCTACTTTCTTACGTCCATGAACGAGGTCAGCC
TTGCACACAATACTAGACTTTCTTGGTTCTATTATTTTGACAAACCTATA
CCATGGCGAGATGTATTTACAAACTTATATAGATGTACTATTGATCCAAG
TACTAGATATTTTCAATACCGATTAATTAATGAATTTTTACCTTGTAAAA
AAATTCTACATATATGGAAATTAATAGACTCTAGCTCTTGTTCTTTCTGT
CATGACGATGTAGAATCCTATATTCATATTTTCTGGGAGTGTCCGCATGT
AGTATCATTTTGGAACGATGTAAAAAATTGGTTGAAAGTAGAAACTTCTA
TAGAGTGCTACCTAAATTCCTTTATTATCATATTTGGAGATACATGTAAC
GATGCGCCCCCCCTGAAAAATTTGATTATTTTGTTAGGTAAAGTTTTCAT
CTTCCGGTGTAGACGCTTAAAAATAATAAACTTCCAGGCCTTTAAAAGAC
TAATATCTACTTTTGAAAAAACTGAACGTCTCATTGCATCTCGGAGAGGG
AAGCTGGAGAAGCATCGGGGTAAGTGGGGAACTTTGTGTTTAATTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000232 | genome | Sc0000232:212793..214676 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL82369_cuf0 |
| Biotype | protein_coding |
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