transcript:BL82388_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL82388_cuf0
Unique Nametranscript:BL82388_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL82388_cuf0

>transcript:BL82388_cuf0-protein ID=transcript:BL82388_cuf0-protein|Name=transcript:BL82388_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=102bp
MKCFKISFSPAAECGCPLQASHANLVLTGTTTGSTATYTCKEGFELTSGD
TSHNCGSDGQWEGTLPICEGSHCVDKIEFLIMSYPECYRDNAASFTKKSE
IK
Run BLAST on NCBI

mRNA from alignment at Sc0000448:167128..167475-

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL82388_cuf0 ID=transcript:BL82388_cuf0|Name=transcript:BL82388_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=348bp|location=Sequence derived from alignment at Sc0000448:167128..167475- (Branchiostoma lanceolatum)
TTTAAGCTCACTGCTATAAGCTTTATATGCATCCCGTAACATATGAAATG
CTTTAAAATTTCTTTCTCTCCAGCTGCTGAGTGTGGCTGCCCTCTACAGG
CCTCACATGCAAACTTAGTTCTGACAGGAACAACAACTGGCTCTACTGCA
ACCTACACATGCAAGGAAGGATTTGAGCTGACCAGTGGAGATACAAGCCA
CAACTGTGGAAGTGATGGACAATGGGAGGGCACACTGCCCATCTGTGAAG
GTAGTCATTGTGTTGACAAGATCGAGTTTCTAATCATGAGTTACCCTGAG
TGTTATCGTGACAATGCAGCATCGTTCACAAAGAAGTCGGAAATCAAA

Coding sequence (CDS) from alignment at Sc0000448:167128..167475-

>transcript:BL82388_cuf0 ID=transcript:BL82388_cuf0|Name=transcript:BL82388_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=306bp|location=Sequence derived from alignment at Sc0000448:167128..167475- (Branchiostoma lanceolatum)
ATGAAATGCTTTAAAATTTCTTTCTCTCCAGCTGCTGAGTGTGGCTGCCC
TCTACAGGCCTCACATGCAAACTTAGTTCTGACAGGAACAACAACTGGCT
CTACTGCAACCTACACATGCAAGGAAGGATTTGAGCTGACCAGTGGAGAT
ACAAGCCACAACTGTGGAAGTGATGGACAATGGGAGGGCACACTGCCCAT
CTGTGAAGGTAGTCATTGTGTTGACAAGATCGAGTTTCTAATCATGAGTT
ACCCTGAGTGTTATCGTGACAATGCAGCATCGTTCACAAAGAAGTCGGAA
ATCAAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL82388gene:BL82388Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL82388_cuf0-E1BL82388_cuf0-E1-1564476830-467087Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL82388_cuf0transcript:BL82388_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000448genomeSc0000448:167128..167475 -
Properties
Property NameValue
Transcript idBL82388_cuf0
Biotypeprotein_coding