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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL82401_cuf0 >transcript:BL82401_cuf0-protein ID=transcript:BL82401_cuf0-protein|Name=transcript:BL82401_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=392bp
RNVTQTTKDSFNANREFLHFVSSGMLILAVMETLGLSDINGRPPDAPRGI
EINSLECRRAYLRTAVGKVIDQHVLLSFNTNAVVYDVVTEQATVVPEGRV
PCGFPGCPKHYARDGACLRRHREQCVWRRQEVHGEDTQGENDSSQTAQSD
VHMQSGEHEEDTQGESDSSQTDDKKEDFLYNYNCSVLREGLFDLVKKDSV
NEGDGSRILRNWKFDMIQYYQHKHTHYKDLAFRYISQHKALLTPRLSASI
LHNKTINIHGLPGKNIPKDLHMEFLNKKVKEGLARLGPNMTSRTITREGR
SLKVIQDVLDTLDKDLGAYRGIGKHTVPDISQEIHMLVEDLKPEDPFKVR
PGRFHPTFPNCRQSRHHNINSKKMTAWMIGQKEKLGRRQHLL Run BLAST on NCBI mRNA from alignment at xfSc0005455:241..1454+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL82401_cuf0 ID=transcript:BL82401_cuf0|Name=transcript:BL82401_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1214bp|location=Sequence derived from alignment at xfSc0005455:241..1454+ (Branchiostoma lanceolatum)
GAGAAATGTAACACAAACTACCAAGGACTCATTTAATGCAAATCGGGAGT
TCCTCCACTTTGTCTCCTCTGGGATGTTGATCTTGGCAGTGATGGAGACC
CTTGGTTTATCTGACATCAACGGCAGACCACCAGATGCACCCAGAGGTAT
AGAGATCAATTCTCTAGAATGTCGGCGCGCATACCTAAGGACAGCGGTTG
GCAAGGTCATTGACCAACATGTACTACTCTCCTTCAATACAAATGCAGTT
GTATATGATGTTGTAACCGAACAGGCCACTGTTGTTCCAGAGGGCAGAGT
TCCCTGTGGTTTCCCTGGGTGCCCCAAACATTACGCAAGGGATGGGGCCT
GCCTAAGGAGACACAGGGAACAGTGTGTCTGGAGAAGACAAGAGGTACAT
GGAGAAGACACACAGGGAGAGAACGACAGCTCACAGACAGCACAAAGTGA
TGTACACATGCAGAGTGGAGAACACGAAGAAGACACACAGGGAGAGAGCG
ACAGCTCACAGACAGATGATAAGAAGGAGGATTTCCTATACAATTACAAC
TGTTCTGTGCTGAGGGAGGGATTGTTTGACTTGGTGAAAAAAGATTCGGT
TAATGAAGGCGACGGCAGCAGAATACTCAGGAACTGGAAGTTTGACATGA
TTCAGTACTATCAACATAAACACACACATTACAAGGACCTGGCATTTAGA
TACATTTCACAACACAAAGCTCTTCTAACGCCCCGACTTTCAGCATCCAT
TCTTCACAATAAGACCATTAACATCCATGGTCTTCCTGGCAAGAACATCC
CCAAAGACCTACACATGGAGTTCCTAAACAAGAAGGTAAAGGAGGGACTG
GCAAGACTGGGGCCAAATATGACCTCAAGGACAATCACACGAGAAGGACG
AAGTCTTAAGGTCATCCAAGACGTATTGGACACATTAGACAAGGACCTAG
GTGCATACAGGGGCATAGGGAAACACACGGTACCGGACATATCACAGGAG
ATACACATGCTGGTGGAAGATTTAAAGCCTGAAGATCCGTTTAAAGTAAG
ACCGGGACGATTTCATCCAACATTTCCAAACTGCAGACAGTCACGACACC
ACAACATCAATAGCAAGAAGATGACAGCCTGGATGATTGGCCAGAAAGAA
AAGCTTGGAAGACGACAGCATCTGTTATGAGATAACATCTCACAGACAGC
ACAAAGTGATGTAC Coding sequence (CDS) from alignment at xfSc0005455:241..1454+ >transcript:BL82401_cuf0 ID=transcript:BL82401_cuf0|Name=transcript:BL82401_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1179bp|location=Sequence derived from alignment at xfSc0005455:241..1454+ (Branchiostoma lanceolatum)
AGAAATGTAACACAAACTACCAAGGACTCATTTAATGCAAATCGGGAGTT
CCTCCACTTTGTCTCCTCTGGGATGTTGATCTTGGCAGTGATGGAGACCC
TTGGTTTATCTGACATCAACGGCAGACCACCAGATGCACCCAGAGGTATA
GAGATCAATTCTCTAGAATGTCGGCGCGCATACCTAAGGACAGCGGTTGG
CAAGGTCATTGACCAACATGTACTACTCTCCTTCAATACAAATGCAGTTG
TATATGATGTTGTAACCGAACAGGCCACTGTTGTTCCAGAGGGCAGAGTT
CCCTGTGGTTTCCCTGGGTGCCCCAAACATTACGCAAGGGATGGGGCCTG
CCTAAGGAGACACAGGGAACAGTGTGTCTGGAGAAGACAAGAGGTACATG
GAGAAGACACACAGGGAGAGAACGACAGCTCACAGACAGCACAAAGTGAT
GTACACATGCAGAGTGGAGAACACGAAGAAGACACACAGGGAGAGAGCGA
CAGCTCACAGACAGATGATAAGAAGGAGGATTTCCTATACAATTACAACT
GTTCTGTGCTGAGGGAGGGATTGTTTGACTTGGTGAAAAAAGATTCGGTT
AATGAAGGCGACGGCAGCAGAATACTCAGGAACTGGAAGTTTGACATGAT
TCAGTACTATCAACATAAACACACACATTACAAGGACCTGGCATTTAGAT
ACATTTCACAACACAAAGCTCTTCTAACGCCCCGACTTTCAGCATCCATT
CTTCACAATAAGACCATTAACATCCATGGTCTTCCTGGCAAGAACATCCC
CAAAGACCTACACATGGAGTTCCTAAACAAGAAGGTAAAGGAGGGACTGG
CAAGACTGGGGCCAAATATGACCTCAAGGACAATCACACGAGAAGGACGA
AGTCTTAAGGTCATCCAAGACGTATTGGACACATTAGACAAGGACCTAGG
TGCATACAGGGGCATAGGGAAACACACGGTACCGGACATATCACAGGAGA
TACACATGCTGGTGGAAGATTTAAAGCCTGAAGATCCGTTTAAAGTAAGA
CCGGGACGATTTCATCCAACATTTCCAAACTGCAGACAGTCACGACACCA
CAACATCAATAGCAAGAAGATGACAGCCTGGATGATTGGCCAGAAAGAAA
AGCTTGGAAGACGACAGCATCTGTTATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0005455 | genome | xfSc0005455:241..1454 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL82401_cuf0 |
| Biotype | protein_coding |
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