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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL82467_cuf0 >transcript:BL82467_cuf0-protein ID=transcript:BL82467_cuf0-protein|Name=transcript:BL82467_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=228bp
MASMPGLMQVALDKVNVWANSFCMSANGKKTKDMVISCRRSPVSPPPLTL
NGNPVERVTSFKLLGIVISNDLTWGPHVEYTLTKVQPRIHYLRVARRAAL
PTDVLVQIYKSFIRPVLEYGSPVWAGLPRCLSNELERIQKMCLRICGVPC
DHLPTLESRRGDASRSELQRILRDPSHPCNVFLPPRKKPDHNLRNRETRH
MYKLPLSKTKCHSDSFVMRTLRDIQNLV Run BLAST on NCBI mRNA from alignment at xfSc0000053:51..2986+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL82467_cuf0 ID=transcript:BL82467_cuf0|Name=transcript:BL82467_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2936bp|location=Sequence derived from alignment at xfSc0000053:51..2986+ (Branchiostoma lanceolatum)
CCTCCCCCAGGCATCTTTTTTTTCCTTGTCCCTCCCCCCATACGCACCGG
CCCTCCCCTCCTGCTAAATTTCGTATAGTCCCTTAGCTGAGTGAACAGAC
CCGAGATGTGAGGAGTAAAACACGCTGATGATCTCACCAACTCGGAGTTT
CTGATGGCCTCCATGCCAGGTCTCATGCAAGTGGCACTTGACAAAGTCAA
CGTCTGGGCAAACTCATTTTGCATGAGCGCTAATGGCAAGAAGACAAAAG
ACATGGTCATCAGCTGTCGCCGTAGCCCTGTATCACCCCCTCCACTTACC
TTAAACGGCAACCCCGTCGAGAGAGTCACATCCTTCAAGCTTCTTGGAAT
TGTGATCAGCAACGACCTTACATGGGGACCTCATGTTGAGTACACGCTAA
CTAAGGTCCAACCGCGCATACATTACCTACGCGTAGCCAGGCGTGCTGCC
CTACCCACTGATGTACTTGTGCAAATCTACAAGTCTTTTATCCGACCTGT
GTTAGAGTATGGGTCCCCTGTCTGGGCCGGCCTTCCACGTTGTCTGTCAA
ACGAGTTGGAGAGAATTCAGAAGATGTGTTTGAGGATATGTGGAGTTCCT
TGTGACCACCTGCCAACCCTGGAGTCTAGGAGAGGGGATGCGTCACGTAG
TGAACTTCAGAGAATTCTAAGAGACCCCTCCCACCCCTGCAATGTCTTCC
TCCCACCAAGGAAGAAGCCTGACCATAATCTAAGGAACAGGGAAACCCGA
CACATGTACAAATTACCACTTAGCAAGACCAAATGTCACAGTGACTCGTT
TGTTATGAGGACTCTGAGAGACATTCAAAACCTAGTTTAAAGCTATATTC
GTCTGTCCTCGTTCGTCCAAAGTAACTTTTTAATGTATTTTAGCGCATGA
TAATTCTTTTAAATCTGGTCTATTGGAATGTTTTTAACATACTTCTGTAA
GAAATCTAATGTAATTCAGGTGCAATGTTGATTTCAGAATAAAGATTGAT
TTATAGGAGGGGAAATCCCATTCAAGTTGCCTTAAACAGTTAAAGACAAG
CACTGCTTTGCTCCTCTTAAAGACATTGTCGAAATGTTTCCTGAACATTT
CCCTCTTATTTCAACTAAAAAGAAGTGAGTATCTGACCTTCAGCAGCTCA
ATTGTCCATGTCTTTATCCTTCTACCTCACTTAATGTTACTGGCTGTCGC
CTGCAAAGTAATGATCACAATGATTTGAATTTTGCTAGACATTCATAAAA
GCCTTCGTACTTAAATAGTTTCCCCCCAAATTTGAGTTGTGTACCTTATG
CCTGGGTGAGGCCGAGGACTTATTGATCACCCCACGCACACATGTACTTG
AGGCTTTTCAATATCTTATTAGCTTAATTTCATCTTTTCTCAAGCAGATT
CTTTCACAGGCAAATTTCAAACTTTTTTTTGTGTGAAAATATAACATCTG
AAAATAAGTTGAAAATTGAAAAAACAAGGTTTTGAACTGTAAAATGCAAC
AATAGGGTACTTCATACCATTTTGTGTCATCTTATTTAAACTTTTAAGCT
TAAAACTCTCCAAAAGATTTTAAATCACTTGGAAGTNAGAAGAAAAGTTC
CCAAATTTCCATGCTAGTGTCAATTAACACTCAGCGCAGGGTGGTAGTGT
CATCCACATCGGGAATGGAACAGTGTGTGGAGGAATGTTATGTTCACAGC
TACAGATAAGTGAAGATTTATTTTGACTGTTGGATGGGTAAATGAAACTG
TGGGGCCAGTGAGGAGAACCCTATGCTGACTGTTGCACAGATAGACTGAC
TGTTTGTTTGTTTGTTTGTTGGAGCCAGCGTCATAGTGTGGGGCAAAACA
ACGTTAACTGCCAGGAGAAAAACCAGGCTTATCATCCTATTAGAAGCAAC
CTCGATTCAAGATATAGAGACACCTTTCTCAATCCAGTCACATTTCCTAG
ATCCTTACCTCTGCCATATGAGACTGGGTGCCTTTCTGCAAGATGATAGT
GAAGTTCATACAGAATGAGAGCCATTTCAGACCACCTCCAGTAGGCAGGA
ATACAGAGGATAGAATGGCCCTCCTGCAGCCCAGATCTCAACACAGTTGA
ACACAGTCTCAGACTCACTGATCAGCTTGGACGAGATGTGCATGCAAGAA
TGATCAACAGAACAACACTGGTCGACCTGCAACGACTCCTTGTGGAAGAA
TAGCCAGGGACCGCGTAGCAAAACTGGTGACAATTATGAGGAGGCTGTGG
TGACAGCGCATGGCGTGTGTACTCAGTATTAAGCCACCTTCATCATAACT
GAGGCTCCTTTACACAATTTTTTTGTTGCTTTGGATGAAGACTAACCTTG
GCTTTCATATTGATGTGTTTTGTTGATTCAAGTTTCATATTACCCTCCTA
CACAAGCCACGTGATACCAACAGAAGAAAAGATACTGAATTGAGCGTTTG
ACATTACAGTAGAATCCGCTTAACTGCACCACCCATTTGTCAGTGTTTTT
GGTGCAATTATCCGGCTGGTGCAATTATGCGAAATGCCCAGCTGGACCGC
ACCACCATGGGCGAGGGGGTGTATTGTTAGTCAGAAACACTAGCACAAAG
AAAACAGACGAAATTATTCAGTTATTAACTTTATTTATTGACCCTTTGCT
GAAAATAAAGAAATGACTACGAACCTGTTTTGATTTTGCATTCTTTCATT
TTTCCATGCGATCTACCGCATTACAACACACGTAATGTTACAGGGGAGGC
ATTCTGAAACATCGTCATGCCACTCATGGGATAACAGTTTCTGTGTTACA
TTACGTAGAGTGCAGTTGTCGATTTACGTAAATCATGTACCGCCATGAAA
CTAGGAATTGAAACTAAAACTTGGTTACTGATTATGGGTGACCCGCCCGG
GACCTCCCATACGATTCCTATCAACTGTCAATGGAN Coding sequence (CDS) from alignment at xfSc0000053:51..2986+ >transcript:BL82467_cuf0 ID=transcript:BL82467_cuf0|Name=transcript:BL82467_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=687bp|location=Sequence derived from alignment at xfSc0000053:51..2986+ (Branchiostoma lanceolatum)
ATGGCCTCCATGCCAGGTCTCATGCAAGTGGCACTTGACAAAGTCAACGT
CTGGGCAAACTCATTTTGCATGAGCGCTAATGGCAAGAAGACAAAAGACA
TGGTCATCAGCTGTCGCCGTAGCCCTGTATCACCCCCTCCACTTACCTTA
AACGGCAACCCCGTCGAGAGAGTCACATCCTTCAAGCTTCTTGGAATTGT
GATCAGCAACGACCTTACATGGGGACCTCATGTTGAGTACACGCTAACTA
AGGTCCAACCGCGCATACATTACCTACGCGTAGCCAGGCGTGCTGCCCTA
CCCACTGATGTACTTGTGCAAATCTACAAGTCTTTTATCCGACCTGTGTT
AGAGTATGGGTCCCCTGTCTGGGCCGGCCTTCCACGTTGTCTGTCAAACG
AGTTGGAGAGAATTCAGAAGATGTGTTTGAGGATATGTGGAGTTCCTTGT
GACCACCTGCCAACCCTGGAGTCTAGGAGAGGGGATGCGTCACGTAGTGA
ACTTCAGAGAATTCTAAGAGACCCCTCCCACCCCTGCAATGTCTTCCTCC
CACCAAGGAAGAAGCCTGACCATAATCTAAGGAACAGGGAAACCCGACAC
ATGTACAAATTACCACTTAGCAAGACCAAATGTCACAGTGACTCGTTTGT
TATGAGGACTCTGAGAGACATTCAAAACCTAGTTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0000053 | genome | xfSc0000053:51..2986 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL82467_cuf0 |
| Biotype | protein_coding |
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