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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL82473_cuf0 >transcript:BL82473_cuf0-protein ID=transcript:BL82473_cuf0-protein|Name=transcript:BL82473_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=156bp
MFRRCQSAWQHAPGCCWGMPRPRLPQGSQLEFQKQVLPTPSKPIGSIGNV
CKITGLLPCQMTDDKQPLRPTSSYGVLLQISSKGTVSGDISKKSNQVTVV
CSLMQPSPWRKEKITCMETPQLYLSNTSLHCHIMMSFQVYYFQFNKRKNF
AHCVRN Run BLAST on NCBI mRNA from alignment at xfSc0000107:7612..9826- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL82473_cuf0 ID=transcript:BL82473_cuf0|Name=transcript:BL82473_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2215bp|location=Sequence derived from alignment at xfSc0000107:7612..9826- (Branchiostoma lanceolatum)
GTATGAATGTTGACCTTTGCCATGACCCTTCCTGTATGACCTGTAACCTG
TGCTATTCCCTAGGGTGGCTATAATGTTCAGGAGATGTCAGAGTGCATGG
CAGCATGCTCCAGGGTGCTGTTGGGGGATGCCCCGCCCACGGTTGCCTCA
GGGATCCCAACTAGAATGTGAGTAATGAAGGACAGTTGCTTGTTAGTGAA
TTGTGGGATCATCCTGTTCCCAATATAGTGCTTTTTCTAACAGCTAGGCC
GTATATGCCAATGATGCAAGTTTTTACCAGGCTCTTTTATATAAACCTCT
GAGATTGAAAGATAGAAAAATGAAAACTACAGCAGAGGCTGTCATTCGCA
TTTATTAGTGAAGTAAAATCATTATTATGTTCTTCATGTCATTTATTCAC
GTAGTTCAGAAACAAGTATTGCCAACACCATCCAAGCCCATCGGAAGTAT
TGGAAATGTCTGCAAGATCACAGGCCTTCTTCCCTGCCAGATGACTGATG
ACAAACAACCTTTACGGCCAACCAGTAGCTATGGGGTCTTGCTTCAGATC
AGTTCAAAAGGCACTGTCAGTGGTGATATCAGCAAAAAATCAAATCAAGT
TACAGTGGTCTGTAGTCTCATGCAACCTTCACCATGGAGAAAGGAAAAGA
TTACATGTATGGAAACTCCTCAACTGTACTTGTCAAATACTTCTCTTCAC
TGTCACATCATGATGTCGTTTCAAGTATATTATTTCCAGTTCAACAAAAG
AAAGAATTTTGCACATTGTGTTAGAAATTAATTTCATCCAATCTGTTTTA
AAACATAAACATTTATTATTTTAACTGTTGCTGGTAGCCCATACTAGATG
TTGTGGAGTGATGTTTAATAGAATTTTCCAGACGGATTCAATGCCTTTTA
ATGTTATTAAGATTTATAGATTTTTTTCCATGGAGTTTTGTTGTTGCCAA
ATGTTTTCCAGGTGCAGTTGGTTTCCCAAATCACGTTTCTCACTTTCCTG
TACAGAAAAAAAATTCTGTAAGAATAGAAATACTTGGATGGGAACCCCAG
CCCAAGTGAGTGAAAATTAGACAAAAATGACCACCTAACCAAAGTTGCAT
TCAAACAAAATTTCACCCTTCAATATCTGAAACAAAATGACATGACTCAA
GTGTGTTTTGTTGATAAGTAAGTTATCACATAGAGATCATTAGGTGCTTC
TTGCATAGCAGAGTGGAGGATATTTGTCTTAAACATTGTCAGAATGCACA
AGGATAAGTTTGTCTCCAGCCACAACTTAATCTTTGGCACTCTTTTCTAC
TGTAGTCACAAACAATTTTGTACTGCTACACTAGGAACTTGGGGTACTGA
AGGTTAAATACATGTAGACGTCAGTATGATGATGCAAAAGTCTGTGACTA
GCATCTTTTGGTTAGGACAAAAAAAGCTGAGAATTGCACCAAAGAAGTTA
CAACGACTTTTATGTTTTCGCAGTGATTAAAGTAAGCATACAAGATTATT
GGACTGGTTCAGCACAATATCTGAGTACTTGTTAGTAATACCCCCAAAAA
AATCAAATCCAATACCTTCGGTAAATAACTAGCTCATTGGGGTCAGGAGA
CTTTTTAGGATCTTTTGGAGATATAATTCAAAATATGCCTTTGTAGGAAT
ATTTGCAAGAAATTCTAAAATACACGATTGTGTCCCATTAACATACTAAC
AACATTCTATAGGACCATAACAAAACTTCCACCTTCTGCTCATGGAACAT
TTCTTGAGTAGCACCTTTCAACTTTTTCAGAGCTGAAAACATCCTAAGAA
ACATTTTCATGTAGCTTCTTTATCAGTGTAGGATATACATGTAGGCATGT
TTACTGAAATGGTGAAACAGTTTTAAACATATTAGTAAGATACATGTACA
TTGCTTGGGTGCTGTTGGTGTCATGGGTAAGCTACTTTGTTTTTGTTCAA
GATACTGGCAGCTGTCAAAGTAAAAAAAATGCACTTTTAAAAAAATGTCT
TATTCCTGTAAATACTGTATAATTATAGAGAATTTTATGCACAGTAGATG
CCATAAGTATATATACCAATATGTACAAAGCAAAATGAAGAATTTAATGA
TGTTATTTATTGTGGTCGAGTGTTTGACCAACTGGTCTAGAATGCCAAAA
GCTTGGCTCCTGTGTGCAACTCCTGATTGTGTTTATGTGGAATAAATATT
GTTTGAATCTGCAGT Coding sequence (CDS) from alignment at xfSc0000107:7612..9826- >transcript:BL82473_cuf0 ID=transcript:BL82473_cuf0|Name=transcript:BL82473_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=942bp|location=Sequence derived from alignment at xfSc0000107:7612..9826- (Branchiostoma lanceolatum)
ATGTTCAGGAGATGTCAGAGTGCATGGCAGCATGCTCCAGGGTGCTGTTG
GGGGATGCCCCGCCCACGGTTGCCTCAGGGATCCCAACTAGAATTTCAGA
AACAAGTATTGCCAACACCATCCAAGCCCATCGGAAGTATTGGAAATGTC
TGCAAGATCACAGGCCTTCTTCCCTGCCAGATGACTGATGACAAACAACC
TTTACGGCCAACCAGTAGCTATGGGGTCTTGCTTCAGATCAGTTCAAAAG
GCACTGTCAGTGGTGATATCAGCAAAAAATCAAATCAAGTTACAGTGGTC
TGTAGTCTCATGCAACCTTCACCATGGAGAAAGGAAAAGATTACATGTAT
GGAAACTCCTCAACTGTACTTGTCAAATACTTCTCTTCACTGTCACATCA
TGATGTCGTTTCAAGTATATTATTTCCAGTTCAACAAAAGAAAGAATTTT
GCACATTGTGTTAGAAATTAAATGTTCAGGAGATGTCAGAGTGCATGGCA
GCATGCTCCAGGGTGCTGTTGGGGGATGCCCCGCCCACGGTTGCCTCAGG
GATCCCAACTAGAATTTCAGAAACAAGTATTGCCAACACCATCCAAGCCC
ATCGGAAGTATTGGAAATGTCTGCAAGATCACAGGCCTTCTTCCCTGCCA
GATGACTGATGACAAACAACCTTTACGGCCAACCAGTAGCTATGGGGTCT
TGCTTCAGATCAGTTCAAAAGGCACTGTCAGTGGTGATATCAGCAAAAAA
TCAAATCAAGTTACAGTGGTCTGTAGTCTCATGCAACCTTCACCATGGAG
AAAGGAAAAGATTACATGTATGGAAACTCCTCAACTGTACTTGTCAAATA
CTTCTCTTCACTGTCACATCATGATGTCGTTTCAAGTATATTATTTCCAG
TTCAACAAAAGAAAGAATTTTGCACATTGTGTTAGAAATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0000107 | genome | xfSc0000107:7612..9826 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL82473_cuf0 |
| Biotype | protein_coding |
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