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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL82523_cuf0 >transcript:BL82523_cuf0-protein ID=transcript:BL82523_cuf0-protein|Name=transcript:BL82523_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=236bp
MCGECGYRTNLKPSLSRHMKTHTGEKPYKCDQCDYSTIQKYTFDLHRTKH
SGEKPYICGECGYRTALKHHWSQHLRTHTGEKPFKCDQCDYSAAQTCNLD
RHIAVEHSGEKPYNCGECEYKTVCKFTLAQHMRTHTGEKPYKCDQCDYSA
ARKFTLDQHLAKHTGDKPYMCGECGFRTAQRSSLSRHMRTHTGEKPYSCH
LCNYSAAKKYHLSKHLKTHAKETKSTCVTNVQHTTL Run BLAST on NCBI mRNA from alignment at Sc0000000:1064116..1066383+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL82523_cuf0 ID=transcript:BL82523_cuf0|Name=transcript:BL82523_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2268bp|location=Sequence derived from alignment at Sc0000000:1064116..1066383+ (Branchiostoma lanceolatum)
ACTATCATAAGAAGCAGGTAAGAGTTGCAAACGTACACCCAAGTTTTCTG
ATACGGAACGTAACATTTTAGGCTATATTTTTGGAGCGGCTATCACCGTA
ACAGTTTAACTTATAGCCTATTTCTGGATGTGAATATGGTAGAATTATGA
AGGGGGAGGGGGGCGAAGACAACCATATGCACGACACTCGCCACCTATTA
AAAAACAAAGAGATTTGTTTTCGTCACGTTTCAAAACCTATAGCGTTTCG
TGGTGTAACTGTAAGACACAAGTTCATTTTTTGGGATCAGGAGACAAAGC
TTCATAATTGAAATGTCATACCGTACACAGCAGAGTTAGACATAGACTTG
GGTGTATGTTTGTGTTTGTTGGTGGGTGGAAAGAGGGGGAGGGTATTTAC
ACGCTGTTTTCCACAATGTATATCCCGGCAGAAGTGCAAGGTATGCTTGT
TGGCATTAGAACGGAGTAATATCAGACTCATGTCAGATTATCAGTTTGAA
CTCTTTACGATTTCTTTTTTGATAAACCGATCTTTTCCCGGCCGCCCTCT
CACAATTAGTTGAGGGAATTTTATTGATTTCTCCCGACGTCATTTGGGGT
CATGATAGTCGTCAGGTTTAATTATTAAAGTAATAGTGTCATTCTTCGTC
ATATGAAGTAAAATTAAGTTGTTTGACTGTTCATATCCCCTCCCCCAATA
GTAATGGAAGATTCCAGTGGTGAACATTCCACTGGGAACGAGATGGACCA
TCATAGAGACCCTGAGAAGGAGATGAACCATGCTGGGCATCCTGGGAAGG
AGAGTGACAGCAGGGAGACCCAGACAAAAGACATGGGCCTGCAGCAAGAA
ACGTGTGATGTGAATTTTTCCCCAAAGTCAACCTCACGGGTACATGAGAG
CAGAGGCAATATGGGAAGGCGTATACTGGTGAGAAACCCTACATGTGTGG
GGAGTGCGGGTACAGGACGAATCTTAAGCCTTCCTTATCCCGACATATGA
AAACCCACACAGGAGAAAAGCCTTACAAGTGTGACCAGTGTGACTATTCT
ACTATACAGAAATACACATTTGATTTACACCGTACAAAGCATAGTGGTGA
GAAACCCTACATATGTGGGGAGTGTGGGTACAGGACAGCTCTAAAGCACC
ACTGGTCCCAACATCTGAGAACTCATACAGGGGAAAAACCATTCAAATGT
GACCAGTGCGACTATTCTGCAGCACAAACATGTAATTTAGACAGGCATAT
AGCAGTAGAACACAGCGGTGAGAAACCCTACAATTGTGGGGAGTGTGAGT
ACAAAACAGTTTGTAAGTTTACCTTAGCACAACATATGAGAACCCATACG
GGAGAAAAACCCTACAAATGTGACCAGTGCGACTATTCCGCAGCACGGAA
ATTCACTTTGGACCAACATCTAGCAAAACATACTGGTGACAAACCCTACA
TGTGTGGGGAGTGTGGCTTCAGGACAGCTCAAAGGTCTAGCTTATCACGA
CATATGAGAACCCATACAGGAGAAAAACCATATAGCTGCCATCTGTGTAA
CTACTCTGCAGCTAAGAAATACCACCTGTCTAAACATTTGAAAACACATG
CGAAAGAAACTAAATCTACATGTGTGACAAATGTGCAGCACACAACCTTG
TAAGGAATGTTCTCCAGAAGCGTATTTGTGTGTAATGACAATGAAAACAA
TACGTAACCATGCTAACTATAGTCAATCTTTACCTGGACACCGTAAATAC
TCTGTAGGAAAGAAAGGTACTTNTACATGTGTGACAAATGTGCAGCACAC
AACTTTGTAAGGAATGTTCCCTCCAGAAGCGTATTTGTGTGTAATGACAA
TGAAAACAATAAGTAACCTTGCTAACTATAGTCAATGTTTACCTGGACCC
CGTAAATACTCTGTAGGAAAGAAAGGTACAGTTTATTTGTTTTTGACGTT
CACTGCAGAAACGTTTGTGATCACAGGATTACCTTGGATATTTTATTATC
GGTTTTCTCACTTGATTCAAATCAATTTGTGCGAAAGAATAATCTAACAT
TTGCAAAAAAAGCATATTTTATACACTAAATGTTCTATGTGTTCAATGTA
ATAACAATAAATGTTATAGTTATACTTACATGTTCAAGAAAATGGCGTTA
TTCTGGTAGATATGTTTTCACGCGTTAAATACTTGAAATATGGTAAATAT
GTTCTTGATCATCAGAGTATCTACACGTTTTTTACATCGAATACTTGACA
TTTCTAGTGAGACTAGTT Coding sequence (CDS) from alignment at Sc0000000:1064116..1066383+ >transcript:BL82523_cuf0 ID=transcript:BL82523_cuf0|Name=transcript:BL82523_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1422bp|location=Sequence derived from alignment at Sc0000000:1064116..1066383+ (Branchiostoma lanceolatum)
ATGTGTGGGGAGTGCGGGTACAGGACGAATCTTAAGCCTTCCTTATCCCG
ACATATGAAAACCCACACAGGAGAAAAGCCTTACAAGTGTGACCAGTGTG
ACTATTCTACTATACAGAAATACACATTTGATTTACACCGTACAAAGCAT
AGTGGTGAGAAACCCTACATATGTGGGGAGTGTGGGTACAGGACAGCTCT
AAAGCACCACTGGTCCCAACATCTGAGAACTCATACAGGGGAAAAACCAT
TCAAATGTGACCAGTGCGACTATTCTGCAGCACAAACATGTAATTTAGAC
AGGCATATAGCAGTAGAACACAGCGGTGAGAAACCCTACAATTGTGGGGA
GTGTGAGTACAAAACAGTTTGTAAGTTTACCTTAGCACAACATATGAGAA
CCCATACGGGAGAAAAACCCTACAAATGTGACCAGTGCGACTATTCCGCA
GCACGGAAATTCACTTTGGACCAACATCTAGCAAAACATACTGGTGACAA
ACCCTACATGTGTGGGGAGTGTGGCTTCAGGACAGCTCAAAGGTCTAGCT
TATCACGACATATGAGAACCCATACAGGAGAAAAACCATATAGCTGCCAT
CTGTGTAACTACTCTGCAGCTAAGAAATACCACCTGTCTAAACATTTGAA
AACACATGCGAAAGAAACTAAATCTACATGTGTGACAAATGTGCAGCACA
CAACTTTGTAAATGTGTGGGGAGTGCGGGTACAGGACGAATCTTAAGCCT
TCCTTATCCCGACATATGAAAACCCACACAGGAGAAAAGCCTTACAAGTG
TGACCAGTGTGACTATTCTACTATACAGAAATACACATTTGATTTACACC
GTACAAAGCATAGTGGTGAGAAACCCTACATATGTGGGGAGTGTGGGTAC
AGGACAGCTCTAAAGCACCACTGGTCCCAACATCTGAGAACTCATACAGG
GGAAAAACCATTCAAATGTGACCAGTGCGACTATTCTGCAGCACAAACAT
GTAATTTAGACAGGCATATAGCAGTAGAACACAGCGGTGAGAAACCCTAC
AATTGTGGGGAGTGTGAGTACAAAACAGTTTGTAAGTTTACCTTAGCACA
ACATATGAGAACCCATACGGGAGAAAAACCCTACAAATGTGACCAGTGCG
ACTATTCCGCAGCACGGAAATTCACTTTGGACCAACATCTAGCAAAACAT
ACTGGTGACAAACCCTACATGTGTGGGGAGTGTGGCTTCAGGACAGCTCA
AAGGTCTAGCTTATCACGACATATGAGAACCCATACAGGAGAAAAACCAT
ATAGCTGCCATCTGTGTAACTACTCTGCAGCTAAGAAATACCACCTGTCT
AAACATTTGAAAACACATGCGAAAGAAACTAAATCTACATGTGTGACAAA
TGTGCAGCACACAACTTTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:1064116..1066383 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL82523_cuf0 |
| Biotype | protein_coding |
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