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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL82530_cuf0 >transcript:BL82530_cuf0-protein ID=transcript:BL82530_cuf0-protein|Name=transcript:BL82530_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=141bp
MQLRDVFGKELCTVTYDLTYGIEMYCHAKTTPLCTVRQAVRQSISLPVVF
VPYKFEKEPDLYIDGGVCANFPIYCFDGWWLSMDDQDSFLKRLEEETDDV
KTTSYFYQQCNEARFQPADISEEQRKQQLQKTLGLMVYSKT Run BLAST on NCBI mRNA from alignment at Sc0000040:416504..418930- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL82530_cuf0 ID=transcript:BL82530_cuf0|Name=transcript:BL82530_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2427bp|location=Sequence derived from alignment at Sc0000040:416504..418930- (Branchiostoma lanceolatum)
GGTCACGTGGACCTCTGAAGTACCTCTTCCATGTTCGGAAATTCTTCAAG
GAGTTTGGCGTGTACCCCGGGGAACGGTTCATCAGCTGGTACGGCGAGGT
TATCTACAGGCATCTTCAGAAGCACCACAGGGCTACAGGACTGGACGAGA
ACATCAATCTACTTCAGGTGTGTGTCGTAATGATTACTAGCCATGGATTG
AGATGGGAAGTCTGAAAAAAGAGAGGTATCCATGGATCTGGCTGTTAGTG
TGGTTGTTTACTTCATATGGTTGATTGGAGTGCACAACCAACATGTCTGT
CTGTTAATAAAAGAGAGGTACATAATTTTACCTAGTGACACAAATAAGTC
AGGGTTGATTGTTAAAGAAAACATCTTTATCCGAAATGAGCTTTTCGATA
AAGGACCTTTTTCTAAATATTACAATAATACCGAAAAGCAATGACACGAA
AAACCTCCAGGGGTTGCTTTCGTCTGTACTAATAATATTTATTTTCGACC
AATTTCATGCAGCTTCGTGACGTCTTCGGTAAAGAGCTGTGCACCGTCAC
CTACGACCTGACGTACGGTATCGAGATGTACTGCCATGCCAAGACCACGC
CCCTCTGCACTGTTCGTCAGGCTGTCAGACAGTCCATATCATTGCCAGGT
TAGCGCTCCTATATTCCTATTTGAATAGTGGAAAGGATAGGTAAATTAGA
CAACTACAAATTAGTGTTGCATGCATATATGACCAAATGACAACCATGAA
AACAATTACCATACATATATTAAGTGTGTTAGTTTTGGCCAATGGGGCAG
ATGGGCGCTGTTGAAGACAACAACATTTCATCATTTAAGGACGACAATGG
ATGAATGAATGAATGAATGAATGAATGACGGAAAGAAGAACAAAGTTACA
TTATGTACTCAGTATGAAGTTCTTGAACAACCTTTAGGATAATTGAAATA
TACATTTTCTCATGAATTATGCAAATTAAGTCCTAATTTGTTTTGTATAT
TTGTTTTCATTACCACACAAGTGTTTTTCTGTTGTTTCCAGTGGTGTTTG
TTCCCTATAAGTTTGAAAAAGAGCCAGATCTGTACATAGATGGCGGTGTG
TGTGCCAATTTCCCTATCTACTGCTTTGATGGTAAGGTCTTAAAATTGCT
CCAACTACGAACTCCTACACAGTCTTATCAATGCGCATGCAGACACATGA
AAATCATTTAAAGTGTCCAAATAAAAGACTGACTATTAACGACCGTGGTA
ACTTTGATCAGATTTGTTTTTTGTTTGTTTGTTTGTAGTGTTTGTTTCTA
TTACATACCCGGTTGACCACCACATTAGTTATTAACACACCGGGTTTATA
CTAAAGAGTGCAAGCTGTATATCCGGGCAGATTCATTTGATCCACTCACA
ACGGGAAGGGCTCCTATTCTTTTATGGAGATACATGTACAACAAGAGCTC
ATCTAATTTGAAAAGAATCGTGTTGCTTATGTCTTTCATGACAATATATC
TCTTTAAATTTCTTTGATATTCAAAATGTTTGAGTAACGATGCGATCAAT
GTGATTACAATCTGCTGAATAATGTGGGAACTGTAGATGAGGTTTTATGT
CTTTATACCTTCGTTAATTTAGGATGGTGGCTCTCCATGGACGATCAGGA
CAGCTTCCTGAAACGTTTGGAAGAAGAGACGGACGACGTGAAAACAACCA
GCTATTTCTACCAGCAGTGCAACGAGGCACGATTCCAGCCTGCAGATATT
TCTGAAGAACAAAGGAAACAGCAACTACAAAAGACTCTTGGATTAATGGT
GGTAAGACAGAGTTTTGTCTCTTCATGCCATGATGTAGTTCTGATTGATA
TATTTGTACTTTATTTGTAAATCCTCTGCAGGTGTTTTAGTATCTGTAAA
GAGGTTGATTTTGTTTTTGTAAAGCCTCTGATGTTGTTTTATGTTGGAAT
GTTCTAAAAGTATTTGTAATTGTAACATTTTTTTTAAATCCTATAAATTG
CATAGATTTGTAGAATACATAATGAAAACAGATAATCGGTATTCAAACAT
GTTGTACATTCACAGCTCAAATATTATGGATTCCACAATTGAGGATGTTG
ATGTTAACATGTTCAAACGAACCTGCCTGGCAGTGAATATGAACTTTTAT
CAACTTTCCCACCTTACTAACAGATTAAGGTCTATACTTTATGCCAGCCG
ATTGTCGTAAAAATAATATAAGATGATATAGTTTGATACATCCCTTCACT
TCAACACAAGCAAAATCTGCTCACCTCGAATTCTCCGTCGCTCTTTCGTC
GAGCCGAGGTGAGCAACTTTTGTGTTGAAGCGAAGTATCAAACTTTATCA
TGGAATGTACCAACACAGATGAGCTTTCATTCTAATAACATAAGATATTC
CATTCGCTTTTCTAGTACTCCAAGACG Coding sequence (CDS) from alignment at Sc0000040:416504..418930- >transcript:BL82530_cuf0 ID=transcript:BL82530_cuf0|Name=transcript:BL82530_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1692bp|location=Sequence derived from alignment at Sc0000040:416504..418930- (Branchiostoma lanceolatum)
ATGCAGCTTCGTGACGTCTTCGGTAAAGAGCTGTGCACCGTCACCTACGA
CCTGACGTACGGTATCGAGATGTACTGCCATGCCAAGACCACGCCCCTCT
GCACTGTTCGTCAGGCTGTCAGACAGTCCATATCATTGCCAGTGGTGTTT
GTTCCCTATAAGTTTGAAAAAGAGCCAGATCTGTACATAGATGGCGGTGT
GTGTGCCAATTTCCCTATCTACTGCTTTGATGGATGGTGGCTCTCCATGG
ACGATCAGGACAGCTTCCTGAAACGTTTGGAAGAAGAGACGGACGACGTG
AAAACAACCAGCTATTTCTACCAGCAGTGCAACGAGGCACGATTCCAGCC
TGCAGATATTTCTGAAGAACAAAGGAAACAGCAACTACAAAAGACTCTTG
GATTAATGGTGTACTCCAAGACGATGCAGCTTCGTGACGTCTTCGGTAAA
GAGCTGTGCACCGTCACCTACGACCTGACGTACGGTATCGAGATGTACTG
CCATGCCAAGACCACGCCCCTCTGCACTGTTCGTCAGGCTGTCAGACAGT
CCATATCATTGCCAGTGGTGTTTGTTCCCTATAAGTTTGAAAAAGAGCCA
GATCTGTACATAGATGGCGGTGTGTGTGCCAATTTCCCTATCTACTGCTT
TGATGGATGGTGGCTCTCCATGGACGATCAGGACAGCTTCCTGAAACGTT
TGGAAGAAGAGACGGACGACGTGAAAACAACCAGCTATTTCTACCAGCAG
TGCAACGAGGCACGATTCCAGCCTGCAGATATTTCTGAAGAACAAAGGAA
ACAGCAACTACAAAAGACTCTTGGATTAATGGTGTACTCCAAGACGATGC
AGCTTCGTGACGTCTTCGGTAAAGAGCTGTGCACCGTCACCTACGACCTG
ACGTACGGTATCGAGATGTACTGCCATGCCAAGACCACGCCCCTCTGCAC
TGTTCGTCAGGCTGTCAGACAGTCCATATCATTGCCAGTGGTGTTTGTTC
CCTATAAGTTTGAAAAAGAGCCAGATCTGTACATAGATGGCGGTGTGTGT
GCCAATTTCCCTATCTACTGCTTTGATGGATGGTGGCTCTCCATGGACGA
TCAGGACAGCTTCCTGAAACGTTTGGAAGAAGAGACGGACGACGTGAAAA
CAACCAGCTATTTCTACCAGCAGTGCAACGAGGCACGATTCCAGCCTGCA
GATATTTCTGAAGAACAAAGGAAACAGCAACTACAAAAGACTCTTGGATT
AATGGTGTACTCCAAGACGATGCAGCTTCGTGACGTCTTCGGTAAAGAGC
TGTGCACCGTCACCTACGACCTGACGTACGGTATCGAGATGTACTGCCAT
GCCAAGACCACGCCCCTCTGCACTGTTCGTCAGGCTGTCAGACAGTCCAT
ATCATTGCCAGTGGTGTTTGTTCCCTATAAGTTTGAAAAAGAGCCAGATC
TGTACATAGATGGCGGTGTGTGTGCCAATTTCCCTATCTACTGCTTTGAT
GGATGGTGGCTCTCCATGGACGATCAGGACAGCTTCCTGAAACGTTTGGA
AGAAGAGACGGACGACGTGAAAACAACCAGCTATTTCTACCAGCAGTGCA
ACGAGGCACGATTCCAGCCTGCAGATATTTCTGAAGAACAAAGGAAACAG
CAACTACAAAAGACTCTTGGATTAATGGTGTACTCCAAGACG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000040 | genome | Sc0000040:416504..418930 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL82530_cuf0 |
| Biotype | protein_coding |
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