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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL82548_cuf0 >transcript:BL82548_cuf0-protein ID=transcript:BL82548_cuf0-protein|Name=transcript:BL82548_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=311bp
LKKAVDCKLREEQAGFRSNRSCTEQIFTLRNIIDQCLEHQTPLLLNFIDF
KKAFDSIHRTSLWNIAASYGIPTQFVNIFKSLYVNSRCCVRTEGGTTDFF
DIVTGVRQGCILSPFLFLLAIDFVLKKTTEDGREGVRWNGGEKLTDLDFA
DDLALLAVNNQDLQHLTTKLERYAGNVGLRVSIEKTKAMEVGENTDQPLN
ISVYNNQVQTVEQFTYLGSVLSNSGEVEPDINCRIGKAAAVFRRMHSIWA
TNAIDLDTKLRLYNSIVLPTAIYASETWKCTARLTKKLDVFHQRNLRRIL
KVRWQEHITNE Run BLAST on NCBI mRNA from alignment at xpSc0039678:12254..13188- Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL82548_cuf0 ID=transcript:BL82548_cuf0|Name=transcript:BL82548_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=935bp|location=Sequence derived from alignment at xpSc0039678:12254..13188- (Branchiostoma lanceolatum)
CTGAAGAAAGCTGTTGACTGCAAGTTGAGAGAGGAACAAGCTGGTTTCCG
CAGTAACCGCTCTTGCACAGAACAAATCTTCACTCTCCGTAACATCATCG
ACCAATGCCTCGAACACCAAACCCCACTGTTATTGAACTTCATTGATTTC
AAAAAGGCATTTGACAGTATCCACAGGACATCACTCTGGAATATTGCTGC
CTCTTATGGGATACCAACACAGTTTGTTAACATTTTTAAGAGCCTTTATG
TAAATTCAAGGTGCTGTGTTAGAACAGAGGGTGGAACAACCGATTTCTTT
GACATCGTCACGGGTGTCAGGCAAGGCTGCATCCTTTCTCCTTTCCTTTT
CCTGCTGGCGATAGACTTTGTCCTGAAAAAGACGACAGAGGATGGCAGAG
AAGGAGTGAGGTGGAATGGAGGAGAGAAACTGACAGATCTTGACTTTGCG
GATGATTTAGCCCTGTTAGCTGTCAATAACCAGGACCTGCAGCACCTGAC
AACGAAGCTAGAACGGTATGCGGGGAATGTTGGACTACGAGTCAGCATCG
AGAAGACCAAGGCAATGGAAGTTGGGGAGAACACAGACCAACCGCTTAAC
ATCAGTGTGTACAACAACCAAGTCCAAACAGTGGAACAGTTCACGTACCT
TGGCAGCGTACTTAGTAACAGTGGTGAGGTAGAACCTGACATCAATTGTA
GAATAGGAAAAGCAGCTGCAGTATTTCGAAGGATGCATTCCATTTGGGCA
ACAAACGCCATTGACCTGGATACCAAGCTCCGCCTGTACAACAGTATTGT
CTTACCCACAGCAATATATGCAAGTGAAACTTGGAAATGTACAGCTAGAC
TGACCAAGAAGCTTGATGTGTTTCACCAGAGGAACTTGAGAAGAATACTT
AAAGTGCGATGGCAAGAACACATCACAAATGAGGA Coding sequence (CDS) from alignment at xpSc0039678:12254..13188- >transcript:BL82548_cuf0 ID=transcript:BL82548_cuf0|Name=transcript:BL82548_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=933bp|location=Sequence derived from alignment at xpSc0039678:12254..13188- (Branchiostoma lanceolatum)
CTGAAGAAAGCTGTTGACTGCAAGTTGAGAGAGGAACAAGCTGGTTTCCG
CAGTAACCGCTCTTGCACAGAACAAATCTTCACTCTCCGTAACATCATCG
ACCAATGCCTCGAACACCAAACCCCACTGTTATTGAACTTCATTGATTTC
AAAAAGGCATTTGACAGTATCCACAGGACATCACTCTGGAATATTGCTGC
CTCTTATGGGATACCAACACAGTTTGTTAACATTTTTAAGAGCCTTTATG
TAAATTCAAGGTGCTGTGTTAGAACAGAGGGTGGAACAACCGATTTCTTT
GACATCGTCACGGGTGTCAGGCAAGGCTGCATCCTTTCTCCTTTCCTTTT
CCTGCTGGCGATAGACTTTGTCCTGAAAAAGACGACAGAGGATGGCAGAG
AAGGAGTGAGGTGGAATGGAGGAGAGAAACTGACAGATCTTGACTTTGCG
GATGATTTAGCCCTGTTAGCTGTCAATAACCAGGACCTGCAGCACCTGAC
AACGAAGCTAGAACGGTATGCGGGGAATGTTGGACTACGAGTCAGCATCG
AGAAGACCAAGGCAATGGAAGTTGGGGAGAACACAGACCAACCGCTTAAC
ATCAGTGTGTACAACAACCAAGTCCAAACAGTGGAACAGTTCACGTACCT
TGGCAGCGTACTTAGTAACAGTGGTGAGGTAGAACCTGACATCAATTGTA
GAATAGGAAAAGCAGCTGCAGTATTTCGAAGGATGCATTCCATTTGGGCA
ACAAACGCCATTGACCTGGATACCAAGCTCCGCCTGTACAACAGTATTGT
CTTACCCACAGCAATATATGCAAGTGAAACTTGGAAATGTACAGCTAGAC
TGACCAAGAAGCTTGATGTGTTTCACCAGAGGAACTTGAGAAGAATACTT
AAAGTGCGATGGCAAGAACACATCACAAATGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039678 | genome | xpSc0039678:12254..13188 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL82548_cuf0 |
| Biotype | protein_coding |
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