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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL82598_cuf0 >transcript:BL82598_cuf0-protein ID=transcript:BL82598_cuf0-protein|Name=transcript:BL82598_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=175bp
MSESEVCTCVKCEVCKRKWRDLEHERDSRREERDRLKQEMEKRNSELQTG
KDTVNHIYDIENLKHSDKLIHLHTGLASYALFIWIFPLIKPKLPYIQYLK
SSKSQSTKSYQVRRTNKPGPKRLLSYQNELLVTLMKIKLNLSEQFLAHLL
SCGISLISQVLSTWLPLLSLELRCL Run BLAST on NCBI mRNA from alignment at xpSc0039689:26572..28185- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL82598_cuf0 ID=transcript:BL82598_cuf0|Name=transcript:BL82598_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1614bp|location=Sequence derived from alignment at xpSc0039689:26572..28185- (Branchiostoma lanceolatum)
TGGAATTGTGAGAACGTTTGGGGGCAAGCTTTTATAACCTTGACGAACAG
CTAGGCGGCGTTCGCTGTTGCGCGTACTGCAGTGTTTACTATCATAAATA
TGGGGAAAGGAGATCGATGCGCTGTTTTTGGCTGCAACAACGATAGGAGA
TATCCTGAAAAGTGAGTTTCTATTAATATTAAAACTGAAAATGGCGATAT
GTGTTTATATTCAACGTTATATATTTCATTTTACACATGAATAACAAGGT
TTCGGTTCTGCAACATACGTCTTTACCGCTAGGAGCGCCGTTTTTGCGGG
CCAGTCTGCTATTATTAAAGCCTACTTCTATGTATATCCATGTATTTGTT
TGTACTTCTAACTCTATTTTGAAATTGAATTCTAAAAAATTCTGCTCCCG
GCTTATGAGTACTTTATCTATTCATTGAATTTACATTCCAAGATATGGTT
TTATTCATAACTAAGATAACAATTGTGTACTTTATCAAGAANCATTCCAA
GACATGGTTTTATTCATAACTAAGATAACAATTGTGTACTTTATCAAGAA
CTTGGTACAGTATATATACATATATATTACAAAGAGTATGTAAGATAGAT
GTTTTTGGTAAACACTGTGTTGAACTTTATTTTATTAGACTGCTGATCAA
GGACCACGTGACAACAATCAAGTGGCATTACTGTCCACCAAAGTCCCGAA
GAATATGGACCAAGCTGCTGAACAGGGAAGGCTCTGAAGTGACTTCGAAC
ACAAGAATATGCAGTAATCATTTTGTCCTTGGAGGGCCCTATGGCCAACA
TCCCCATCCGTGCCTTTACATGAGGGGTCCCGACACCTCAACCCATAGCC
TAGAAATCCAGGAGATCATTTCAGGAGCAGAGCCTACCACTACTACTAGA
GGTGGACAGGTGAAGCGCGCAAAACATGAAACAAGAGCAAGTAAAGTAGC
AAAAATCAGTTCCGATCACTGCTACGACACTCCCTCTGTGGCAGCCTCAG
AGGAAATGCCGCTCGACTCTCCACCATCACCTTGTAGGTCATCATCATTT
AGCTAATAGGACTTGAAAGAGGAGCATGGTTATGCCTTTATGTCAGAGTC
TGAAGTCTGTACATGTGTAAAATGTGAGGTGTGCAAGAGGAAGTGGAGGG
ATCTCGAACATGAGAGGGACAGTCGTAGGGAGGAGCGTGATAGGTTGAAA
CAGGAGATGGAGAAAAGGAATTCAGAATTGCAGACTGGGAAAGACACAGT
GAATCACATATACGACATAGAAAACCTTAAGCACTCTGACAAGCTTATAC
ACTTACACACTGGCCTGGCTTCATATGCATTGTTTATCTGGATCTTCCCT
CTCATTAAACCAAAACTGCCATACATACAGTATTTAAAAAGTTCTAAATC
TCAATCCACAAAGTCATACCAAGTCAGAAGAACCAACAAGCCAGGACCAA
AACGGTTGCTTTCTTATCAAAATGAACTCCTAGTTACTCTTATGAAAATA
AAACTCAACCTAAGTGAGCAGTTTCTCGCACACCTATTAAGTTGTGGGAT
AAGTCTCATTTCTCAAGTTTTGTCTACTTGGCTACCTTTACTGTCTTTGG
AGCTAAGATGTCTG Coding sequence (CDS) from alignment at xpSc0039689:26572..28185- >transcript:BL82598_cuf0 ID=transcript:BL82598_cuf0|Name=transcript:BL82598_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=525bp|location=Sequence derived from alignment at xpSc0039689:26572..28185- (Branchiostoma lanceolatum)
ATGTCAGAGTCTGAAGTCTGTACATGTGTAAAATGTGAGGTGTGCAAGAG
GAAGTGGAGGGATCTCGAACATGAGAGGGACAGTCGTAGGGAGGAGCGTG
ATAGGTTGAAACAGGAGATGGAGAAAAGGAATTCAGAATTGCAGACTGGG
AAAGACACAGTGAATCACATATACGACATAGAAAACCTTAAGCACTCTGA
CAAGCTTATACACTTACACACTGGCCTGGCTTCATATGCATTGTTTATCT
GGATCTTCCCTCTCATTAAACCAAAACTGCCATACATACAGTATTTAAAA
AGTTCTAAATCTCAATCCACAAAGTCATACCAAGTCAGAAGAACCAACAA
GCCAGGACCAAAACGGTTGCTTTCTTATCAAAATGAACTCCTAGTTACTC
TTATGAAAATAAAACTCAACCTAAGTGAGCAGTTTCTCGCACACCTATTA
AGTTGTGGGATAAGTCTCATTTCTCAAGTTTTGTCTACTTGGCTACCTTT
ACTGTCTTTGGAGCTAAGATGTCTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039689 | genome | xpSc0039689:26572..28185 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL82598_cuf0 |
| Biotype | protein_coding |
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