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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL82623_cuf0 >transcript:BL82623_cuf0-protein ID=transcript:BL82623_cuf0-protein|Name=transcript:BL82623_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=112bp
MLEGKLVTHLFIPCKGGLQQDNVTKLMRENPNSQHLLGDQINVSEICLSL
MAVCILCVNNTVIMMKMFTYNFVICTKACVHNCWNFKYTYSVILLLTLCL
LVVVTDHDCCAL Run BLAST on NCBI mRNA from alignment at Sc0000019:142645..144377- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL82623_cuf0 ID=transcript:BL82623_cuf0|Name=transcript:BL82623_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1733bp|location=Sequence derived from alignment at Sc0000019:142645..144377- (Branchiostoma lanceolatum)
AATAAATCAAATCTTTTGTAAGCATATGACAAAATAGAACTAGAGTTCCA
CGACCTCATACCTTCGCCAAATGATTTTAACCTTTATGACTGACATATTA
GGAGTGTTTCTCATCAATTGTAAATCATACCAGTTGATTGTCTTAAAATA
CAACATGTCCAAAGTATGAGCTTAACAAATTATGAGCTTAACAAAGAAGT
TTATGCTAATATTTATCATCAATGATTCAAATGAGGCCCTTATTAGCCTA
ATTTGATTCAACGATGTTCACATTCACATAACTTCCCGATGCCACAAATT
ATTAAATGTATGAAATTGCTGTCATTTGCCAGTGTGGAACTACAGAAGTA
GACTGGATCCACCCGGTGACCAGTCCTTCCTCCCGTCATCTGAGATGAAA
GGCTAAAGCCCTATATTATTGTGGGACGAGACTTCAGCTGTCATCATCAA
GTACATTCCAGCTACACCTTAACATTACCTGGGCTAGATCCAAATGCAAC
ATTCTACACATATGACAGTATTTGATTTAGTACGTACAGTATCGTGGCAC
ATACACTAACGTTAACATTTCTCTGTACAGGGCTATCTGTTAAGAGAATA
GTTAGTGTTGTAAATGGTAACAAGACCAACCATTGGACTTGACTATCACA
ATTACCTTTACGTATAGATTACTGGTACATGTCTGACAACTGTGTCACGA
TCACTGCTGTCTACCACAGTAAATGTCAACCATGCAGTTTTTAAATCAAC
CAGATAGGCTGAGTCTCGGAGGCAGGGGTCCCATGTAGAAAAGAATACCT
GCCTCACAGTATATATAGTATTGTAAAAATGTTCTGTAAAAAAATGGATG
ACAAGACAAAAACAGGTGGTTATTCTCCAAGCAGATGTTGGAAGGGAAGC
TTGTAACACACTTATTTATCCCTTGTAAAGGAGGTTTGCAACAGGATAAT
GTAACAAAGTTAATGAGAGAAAATCCTAACTCCCAACATCTGCTTGGAGA
TCAGATAAATGTGTCAGAGATCTGCTTGAGTCTGATGGCTGTGTGCATCT
TGTGTGTGAACAATACGGTCATCATGATGAAGATGTTCACATACAACTTT
GTCATTTGTACAAAAGCCTGTGTGCACAACTGTTGGAACTTTAAATACAC
CTATTCTGTCATCCTACTCCTGACTCTGTGTTTACTGGTTGTTGTTACTG
ATCATGACTGTTGTGCATTATAGAAAGAAAGAGTAACCATAATGTCAGCA
GCTAGTGTTGCAAGCCCCAGGCCCTGCTGGTTTGCAGAGAGACCTCACTA
CTATAGACTGATGAAGATTGCTTGAGTCAGCCAAAGATACACCCAACATC
TAAAACTCTTACGGTAGTTTTACACAACACTAGCTACCAGATTCTGATTT
GCCCCAAAGATGTCCTGGCTCCATGATGCAGATACCAGGTAGATGAGGAT
GTTTTTGAGATGTGGGGAATCCTTAACTGAGGAAACATCTCTCAAAGAAT
CAGTCATCATTGTCTGTCAAGAAACTCTTAAGCTATCATATCATGAAATG
AGTGGGTGGGAACAATTAGCATTTTCTTGTGGACACATGAATTAAGAAAG
TAAGTATTCAAGAAACATTTTAAATGGCACTTATTCAGGGTTTTTCAAAG
GAACAGCCCATAGATGAATGAACTCATAGGTGAAGAACATAACTGTTTTC
AACTTCAATTGGCTACAGGTAACACATCATAAT Coding sequence (CDS) from alignment at Sc0000019:142645..144377- >transcript:BL82623_cuf0 ID=transcript:BL82623_cuf0|Name=transcript:BL82623_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=339bp|location=Sequence derived from alignment at Sc0000019:142645..144377- (Branchiostoma lanceolatum)
ATGTTGGAAGGGAAGCTTGTAACACACTTATTTATCCCTTGTAAAGGAGG
TTTGCAACAGGATAATGTAACAAAGTTAATGAGAGAAAATCCTAACTCCC
AACATCTGCTTGGAGATCAGATAAATGTGTCAGAGATCTGCTTGAGTCTG
ATGGCTGTGTGCATCTTGTGTGTGAACAATACGGTCATCATGATGAAGAT
GTTCACATACAACTTTGTCATTTGTACAAAAGCCTGTGTGCACAACTGTT
GGAACTTTAAATACACCTATTCTGTCATCCTACTCCTGACTCTGTGTTTA
CTGGTTGTTGTTACTGATCATGACTGTTGTGCATTATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000019 | genome | Sc0000019:142645..144377 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL82623_cuf0 |
| Biotype | protein_coding |
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