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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL84661_cuf0 >transcript:BL84661_cuf0-protein ID=transcript:BL84661_cuf0-protein|Name=transcript:BL84661_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=416bp
MAASDVYWTLYGNSLRCDCDLHWLAVKMTCLQACKGRGGACCLSCNACFL
TDNMKPDKFLCYSPSPMRLHSLLNESTLTRMDCESRQSTVRTVTQAAAST
MMPTKEVMSESHNTQSLTDGVDNNTTLWIDVNTKNDNSAMTKTNHSHSDS
KNVKAGEEQRLTILYIVVIVGGSLLILTFIACFVILRVKQELCCKCCKDV
SHHSVDLHHATPQEVNSVSNGNPAGAVNHIGLVGSQIKPSIVNSLYDRTS
VGSADHIHLDDPEAADKINGDPDEQTTPYAIAYNVKNDEITPYAEGHPRD
DNGLRESDPLEVGIVTDGGVKFSGGYVYGDQREIREDSSSVYENGPDGGA
KFSDGYVYGGQSEIREDSFSVYENRQDGGAEFSGEFFYGDQSVIRENSSS
VYENGTTSCECTVSRM Run BLAST on NCBI mRNA from alignment at Sc0000028:1851417..1854120+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL84661_cuf0 ID=transcript:BL84661_cuf0|Name=transcript:BL84661_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2704bp|location=Sequence derived from alignment at Sc0000028:1851417..1854120+ (Branchiostoma lanceolatum)
GTCACATGACAGGTTGTCGGCTGCAGAAGAAGGATTGTGGTCTCCGAATT
ATCCAGAGTCTGTTGGTCCTATCTAAGCTATCTTAGACTTTAGGCATCTT
TCAACGTTGTATTGTTCAACTTTCTCGGGCAGTGTGTCCCCGGATCTACC
TATATCTAAATTAGAACAATAATCGCCGGCGGATACATCTGACTATGTTC
AGACAGTACTGATTGCTAGCAGAAACCAAAGACAACATAACGGCGATCGT
AAGTATCTGATTACTCTTTTCTGAACCAAAAGCTCCAAGATGGCGGTACA
TGGATTGCTGTTGCTACTGACTTTTGCATCTTTTGGGGTAACGTGTAGTT
GTCTGCCCTCCGCATGTACGGTCGAGAGTTTGCCGTCCTGGACATCTCTG
CGGACAAGGGTCGAATGTAACGGACATAATCTTGTCATGATTCCCAACGA
TATACCCGAGAACGTTGAGAAGCTCTGTGTCGCTCGGAACCGCATTGTTA
ACGTCACGTACATTCCGTCACTACCTGTACTGAGCGAGCTGGATCTGAGC
TGGAACGCTATGCATACTTTTTCCTGGAGGTCGCTCCGTGCCGTGCCAAA
ACTTACGCATCTAGAACTTCAAACTAACAAACTACGAGTCGTGGAACTGG
ACACCGTCATCGACTATCTTCCGAAGCTAAGGTATGTTAATCTAGCTTAC
AACAATATTGTATCGCTCTACCAATACCAGCTGGGATGGCCGCGAGTGAC
GTGTATTGGACTCTCTATGGAAACTCACTACGCTGCGACTGTGACCTACA
CTGGTTGGCTGTCAAAATGACCTGCTTACAAGCCTGTAAGGGGAGAGGTG
GAGCCTGTTGCTTGTCTTGTAATGCATGCTTTCTAACTGACAACATGAAG
CCTGACAAGTTTCTATGCTACAGTCCTAGTCCAATGCGTCTGCATTCTTT
GTTGAACGAGTCGACTCTGACGCGAATGGACTGCGAATCACGCCAGTCTA
CTGTACGTACTGTCACCCAGGCAGCAGCTTCAACGATGATGCCAACAAAA
GAAGTTATGAGCGAATCGCACAACACTCAGTCTCTCACCGATGGCGTGGA
CAATAACACCACTCTCTGGATTGACGTAAACACAAAGAACGACAACTCGG
CAATGACGAAAACAAATCATTCCCATTCTGACTCAAAGAACGTAAAGGCG
GGGGAGGAGCAACGACTGACGATTCTTTACATCGTCGTCATCGTGGGTGG
AAGTTTGTTGATCTTGACTTTCATTGCCTGCTTCGTAATTCTTAGAGTGA
AACAAGAGTTGTGCTGCAAATGTTGTAAAGATGTCAGTCACCACTCAGTA
GACTTACATCACGCCACACCACAAGAAGTAAACTCTGTCTCCAATGGCAA
CCCAGCTGGAGCTGTCAATCACATTGGTCTAGTTGGCAGTCAGATCAAAC
CATCAATAGTAAACTCTCTATACGATCGTACCTCTGTAGGAAGTGCCGAT
CACATACATCTGGATGATCCAGAAGCTGCAGACAAAATCAATGGTGACCC
AGATGAACAGACTACCCCGTATGCCATAGCGTATAATGTCAAAAACGATG
AGATCACACCATACGCTGAAGGACACCCTCGCGATGACAACGGTTTGCGT
GAGTCAGACCCCCTAGAAGTTGGTATTGTTACAGACGGGGGGGTCAAGTT
TAGCGGTGGGTATGTCTATGGTGACCAGAGAGAAATCCGCGAAGATTCCT
CTAGTGTGTACGAAAACGGGCCAGACGGGGGAGCCAAGTTTAGCGATGGG
TATGTCTATGGTGGCCAGAGTGAAATCCGCGAAGATTCCTTTAGTGTGTA
CGAAAACAGGCAAGACGGGGGGGCCGAGTTTAGCGGTGAATTTTTCTATG
GTGACCAGAGTGTAATCCGCGAAAATTCCTCTAGTGTGTACGAAAACGGG
ACGACATCTTGCGAATGTACCGTTTCCAGAATGTAAAGATGACACAAAAG
AAACCATTGTAAACTGTCCTGTGGTCCATTGGAAAACATGACTGGACAAA
ACTGCATGACACACAGGAACACCACATATACAGAATATACATGTACAAAT
GATAAAAGAAAGATAAGGCTACTTGAGGTCTATATACAATGTTGACAATA
TCTAATTACTTAACAATTTCAAACGATTCCAGGTGCTGTACATTCTATCA
AAAAGCGTTTTTTTTTTCCTGAGCATTTGTTCTGGGCTTCGGTAATAGGA
TGGTTTGTGATTTAGACGATCATGTTTGAGAACCATGTGATTGCATTGTG
ATCTGTTTATACAGAGAAACTGGCTGTTTGTTTTCCATGATTATACGGAA
ACTCATCATGCTTTTCTGTTACAGACATATGTAAAATTTTCAGGATTAAT
ATTGATCTGTGGATATTCTTTTGACATGTTTAGTATCTATGTGGTTATTG
TCTAGTAAAAGTGAAAATTTACGAAAAATTATCATAGAAAGGCTCATCAT
GGTATCCTTGAACACGCATATGATGTATATATATCTATCTATATATTATT
ATATTATTAGTGATATCTATCTGTTTAAACTCTTGCCTCTTAGTGATATG
TACTTGAGATTAATGTAGTAATACTCTTAATAATGTTTATCCAGTAATAC
AGTGATACTCTATGTATACTCAAACTTTTTAAAACGTTTTGGTTTTCATC
CGGG Coding sequence (CDS) from alignment at Sc0000028:1851417..1854120+ >transcript:BL84661_cuf0 ID=transcript:BL84661_cuf0|Name=transcript:BL84661_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1251bp|location=Sequence derived from alignment at Sc0000028:1851417..1854120+ (Branchiostoma lanceolatum)
ATGGCCGCGAGTGACGTGTATTGGACTCTCTATGGAAACTCACTACGCTG
CGACTGTGACCTACACTGGTTGGCTGTCAAAATGACCTGCTTACAAGCCT
GTAAGGGGAGAGGTGGAGCCTGTTGCTTGTCTTGTAATGCATGCTTTCTA
ACTGACAACATGAAGCCTGACAAGTTTCTATGCTACAGTCCTAGTCCAAT
GCGTCTGCATTCTTTGTTGAACGAGTCGACTCTGACGCGAATGGACTGCG
AATCACGCCAGTCTACTGTACGTACTGTCACCCAGGCAGCAGCTTCAACG
ATGATGCCAACAAAAGAAGTTATGAGCGAATCGCACAACACTCAGTCTCT
CACCGATGGCGTGGACAATAACACCACTCTCTGGATTGACGTAAACACAA
AGAACGACAACTCGGCAATGACGAAAACAAATCATTCCCATTCTGACTCA
AAGAACGTAAAGGCGGGGGAGGAGCAACGACTGACGATTCTTTACATCGT
CGTCATCGTGGGTGGAAGTTTGTTGATCTTGACTTTCATTGCCTGCTTCG
TAATTCTTAGAGTGAAACAAGAGTTGTGCTGCAAATGTTGTAAAGATGTC
AGTCACCACTCAGTAGACTTACATCACGCCACACCACAAGAAGTAAACTC
TGTCTCCAATGGCAACCCAGCTGGAGCTGTCAATCACATTGGTCTAGTTG
GCAGTCAGATCAAACCATCAATAGTAAACTCTCTATACGATCGTACCTCT
GTAGGAAGTGCCGATCACATACATCTGGATGATCCAGAAGCTGCAGACAA
AATCAATGGTGACCCAGATGAACAGACTACCCCGTATGCCATAGCGTATA
ATGTCAAAAACGATGAGATCACACCATACGCTGAAGGACACCCTCGCGAT
GACAACGGTTTGCGTGAGTCAGACCCCCTAGAAGTTGGTATTGTTACAGA
CGGGGGGGTCAAGTTTAGCGGTGGGTATGTCTATGGTGACCAGAGAGAAA
TCCGCGAAGATTCCTCTAGTGTGTACGAAAACGGGCCAGACGGGGGAGCC
AAGTTTAGCGATGGGTATGTCTATGGTGGCCAGAGTGAAATCCGCGAAGA
TTCCTTTAGTGTGTACGAAAACAGGCAAGACGGGGGGGCCGAGTTTAGCG
GTGAATTTTTCTATGGTGACCAGAGTGTAATCCGCGAAAATTCCTCTAGT
GTGTACGAAAACGGGACGACATCTTGCGAATGTACCGTTTCCAGAATGTA
A
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000028 | genome | Sc0000028:1851417..1854120 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL84661_cuf0 |
| Biotype | protein_coding |
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