|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL84697_cuf0 >transcript:BL84697_cuf0-protein ID=transcript:BL84697_cuf0-protein|Name=transcript:BL84697_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=129bp
MRLNSKVNSNWSVRLTFISQFHSFAYAKSSHLLDVNMVYLVNNTVIGLQR
INRVVFLLINNGKRFERLSQDLNTTITYDIPYRALFLWYKTLGVTVTGFR
PTSKSLSMIPFSKVNRISLVSGHVYGQTS Run BLAST on NCBI mRNA from alignment at Sc0000038:1703371..1705090- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL84697_cuf0 ID=transcript:BL84697_cuf0|Name=transcript:BL84697_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1720bp|location=Sequence derived from alignment at Sc0000038:1703371..1705090- (Branchiostoma lanceolatum)
GTAAAACTACAGGGAGGGTTTTGCTTTTTCGGACCATTATACACACTGGA
GACAGCTATACCTTACTTTTCAACACACCCTTGGAAATTTAGACATACTA
AGGAAAGAAAACTACAGCATTTCATAATATGTGGTAGTCAGAATCTGATT
GCAGGAAGAATTAGAACAGAGAGCTGAAAAATGGATCAAATGTTCATGAC
TGGCATTTGAACGCTTCTTCTTATCCTTTCCTAATGAGGTTAAATTCAAA
AGTCAATTCAAATTGGTCTGTCAGGCTAACATTTATCAGCCAGTTCCATT
CATTTGCATATGCCAAATCAAGTCATTTACTTGATGTAAATATGGTGTAT
CTTGTCAACAACACAGTCATAGGTTTGCAAAGGATAAATAGGGTTGTTTT
CTTATTGATAAATAACGGTAAGAGGTTTGAAAGGCTTTCCCAAGACTTGA
ACACAACAATCACTTACGATATTCCATACAGAGCACTTTTTTTATGGTAT
AAAACTTTAGGAGTTACAGTCACAGGGTTTAGACCTACCAGCAAATCACT
TTCCATGATTCCCTTCAGTAAAGTTAACAGAATTAGCCTGGTATCTGGAC
ATGTCTATGGTCAGACATCCTGATCGAATCTACTGAAACATAGCCTAAAA
TCAGCCGTTTTCCCTACTTCATTTAAAAAGACTTGATTCCTTGTATCATT
CTTAAACGGAATTAAACCACTTTTCTACCACAATGTGACGCATGCAGAGA
CATTTCATTATATCTTTTAAATTACAGTCATTTCCAACATCATAAACATT
ATCATACTTTTAATTTGTCAGACTCTGAATTTAATTTTAATTCAGTCCTT
AGTTTGTGCTACATGATCAAATCCAACTTGGGTCATGATTATTCACTTGA
AATAGCAAATCACAATAAAAAAAGGCCTCTTTGAATAATGTTTTCTTAAT
ACTTACTGCATTGAGCACATGGCCAGGTGTACTTAAAATACATGTATGGC
TTTCTTTCCAATGTAAAATAGTCTGAATTGAAATTGGAATGGAAGGTAGG
GTACTGCTTATACAGCATGTTGAATCTGAGGTCCAGTACTGCGAGATAAC
TTCAGTGTTAAGTTGATGTGTAGAAATACTAGATGGGGACCAAGAGTAAC
AATTTAGAAGCTACTAAGGGAAGATTCGATTTTACTTTTGGATACTCTCA
AAAAGGGTTTGAAAATTATGGGTTACATACAATATATCTTTTGTTCTCAG
TGGTTTTATCAAGACAGATCTACATGTAAACTATCAGTCATTTTTTGATA
GATTTGACTAATTTTCACTTCATAAGGCTCTTATTCATATTCCCTTTGCA
TCATTGCATCCTTTCTCTTCAACTTCAATTCATAATTGTCATATCTTCTT
ATGGAAATCTTTTGTACATTTTCTTTAAATACAAATACCACAGGAATTAA
TTACATCTCATGCAAGGACAAAGGCAAAGGTGGCTCAATTTAACTTAAAT
ATTAGGAACCTTATAATTTACCATAAAATTAGCGCATGGTATACCGTCAC
TAAAAATCACCGGTTTTGCATTTACACTTTCTTAGTTACAGTTCAGAATA
AATATTGTGTTAAGCAGGTTACCTTCAATTGAACACTAAGCAAACTTAGT
GATGGCAAAGGAAACGTACAAGTCCTGATCACTCGGATGATTTTCTTAGT
TACCATTCCCACAGAGTTTA Coding sequence (CDS) from alignment at Sc0000038:1703371..1705090- >transcript:BL84697_cuf0 ID=transcript:BL84697_cuf0|Name=transcript:BL84697_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=390bp|location=Sequence derived from alignment at Sc0000038:1703371..1705090- (Branchiostoma lanceolatum)
ATGAGGTTAAATTCAAAAGTCAATTCAAATTGGTCTGTCAGGCTAACATT
TATCAGCCAGTTCCATTCATTTGCATATGCCAAATCAAGTCATTTACTTG
ATGTAAATATGGTGTATCTTGTCAACAACACAGTCATAGGTTTGCAAAGG
ATAAATAGGGTTGTTTTCTTATTGATAAATAACGGTAAGAGGTTTGAAAG
GCTTTCCCAAGACTTGAACACAACAATCACTTACGATATTCCATACAGAG
CACTTTTTTTATGGTATAAAACTTTAGGAGTTACAGTCACAGGGTTTAGA
CCTACCAGCAAATCACTTTCCATGATTCCCTTCAGTAAAGTTAACAGAAT
TAGCCTGGTATCTGGACATGTCTATGGTCAGACATCCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000038 | genome | Sc0000038:1703371..1705090 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL84697_cuf0 |
| Biotype | protein_coding |
|
