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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL86299_cuf0 >transcript:BL86299_cuf0-protein ID=transcript:BL86299_cuf0-protein|Name=transcript:BL86299_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=204bp
VVRMIVLLFLSTVSGTTDPCQHHGVINQARRSSAATVDDSDLVICDIYLD
KGWYRFTSYTGGEIPTSCVQPYQCSTEVPLWMDGTLPEGDDIVNRTACGN
LGDPSDCCTIPIDIRVKRCTESSGVFYVYELQPTYSCPMAYCAGSLPLCP
DGEVYDDFHKHCIETRPVVPCDFEGHGFCEWLQERDDDLDWTKTTGQHSS
GSVL Run BLAST on NCBI mRNA from alignment at Sc0000056:1068971..1070487- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL86299_cuf0 ID=transcript:BL86299_cuf0|Name=transcript:BL86299_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1517bp|location=Sequence derived from alignment at Sc0000056:1068971..1070487- (Branchiostoma lanceolatum)
GAGTTGTTCGTATGATTGTGCTGCTATTCCTCAGTACAGGTAATCAAAGT
TTACCAATCTTAACTTAATTGACCAATGGTGAGAGAGACGTGTACGTGGT
TTAACCACTAATTCTGTTACCATATTGCGTTGATTACGATTGTTATCGGG
ATATAAGGATATAAATAGGACCAGTTAACATCTGTAGAAGGTATACTCGC
AACGAAAAGCTGAAAAGTGCTATTTTCATGATCATGGGCTGGTATAAACG
CAAGCTAACAGTGTTAGGTAGACATACAACATTGTCGCGTGTCGTACAAT
ACGTTGTTTATTCACACAGTGTCTGGTACCACGGATCCCTGTCAACACCA
TGGCGTTATAAACCAGGCGAGACGAAGCAGCGCCGCTACAGTAGATGACT
CTGACCTGGTCATTTGTGACATCTACCTGGACAAGGGCTGGTACCGTTTT
ACCAGCTACACCGGTGGAGAGATCCCGACCAGCTGTGTCCAACCGTACCA
GTGCAGTACGGAAGTACCGCTATGGATGGACGGTACTTTACCGGAGGGGG
ACGACATAGTTAACAGGACGGCATGCGGGAATCTGGGAGACCCGTCGGAC
TGTTGTACGATCCCGATAGACATCCGAGTCAAACGGTGTACAGAGTCTAG
CGGTGTGTTCTACGTGTATGAGCTGCAACCTACATACTCCTGCCCCATGG
CGTATTGTGCGGGTGAGTGTGCCCTTGATTGCATTAAACCACATAAATAT
CACGGATATTGAAGATAGTTGTAGCGTGTATGGACATGCCTAACATTGTG
TTAGCGTGTAGCATATGGTTCGTTGCATAACCCCCTCCCCACAACAGCTG
TAACATGTATCTTTGTGTGTGTGTGCTGCAATATACATTATTTCAATGTA
AGCAGAAAAGAAAATTTTGGTTTTCACAATATTCAGGAAGTCTTCCGCTA
TGTCCAGACGGAGAGGTCTATGACGACTTCCATAAGCATTGTATCGGTGA
GTAATTATCGGTTCAAATTCATCTTTTTATGAGCTTTGAATGCCTTTTGT
AGTTTTTGACTACTGTATCATATGACATCATTGGTATTTACATACCTACA
TTACATAATGATGATTGTTAAGTACATAATACAGTGGGATCTTGAGTTCA
TAATTTTAGGGTTGGAGATAGCTCAAGCTGGAGTGGTCGAAGTGTTTTAT
TTTGGAATATTTCACTGGCTTCTACAGAAACGGATGAATTATTTGTGCTT
GATATGGTTTATACATTAATGGTTACAAGAATATTCTGTTGCTAATGCCT
GAAATGAATGTTTTGTATGCAACGTATTCTGCCCCCCCCCCCTCTCCTCC
CTCACACCAACTCCATGTTGTTGTTACCCGTCCGAATCCACAGAGACCCG
GCCTGTCGTACCGTGTGATTTTGAAGGCCATGGGTTTTGTGAGTGGCTCC
AGGAGAGAGACGATGATCTGGACTGGACCAAAACAACCGGACAACATTCA
TCAGGGTCCGTTCTACC Coding sequence (CDS) from alignment at Sc0000056:1068971..1070487- >transcript:BL86299_cuf0 ID=transcript:BL86299_cuf0|Name=transcript:BL86299_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2448bp|location=Sequence derived from alignment at Sc0000056:1068971..1070487- (Branchiostoma lanceolatum)
GTTGTTCGTATGATTGTGCTGCTATTCCTCAGTACAGTGTCTGGTACCAC
GGATCCCTGTCAACACCATGGCGTTATAAACCAGGCGAGACGAAGCAGCG
CCGCTACAGTAGATGACTCTGACCTGGTCATTTGTGACATCTACCTGGAC
AAGGGCTGGTACCGTTTTACCAGCTACACCGGTGGAGAGATCCCGACCAG
CTGTGTCCAACCGTACCAGTGCAGTACGGAAGTACCGCTATGGATGGACG
GTACTTTACCGGAGGGGGACGACATAGTTAACAGGACGGCATGCGGGAAT
CTGGGAGACCCGTCGGACTGTTGTACGATCCCGATAGACATCCGAGTCAA
ACGGTGTACAGAGTCTAGCGGTGTGTTCTACGTGTATGAGCTGCAACCTA
CATACTCCTGCCCCATGGCGTATTGTGCGGGAAGTCTTCCGCTATGTCCA
GACGGAGAGGTCTATGACGACTTCCATAAGCATTGTATCGAGACCCGGCC
TGTCGTACCGTGTGATTTTGAAGGCCATGGGTTTTGTGAGTGGCTCCAGG
AGAGAGACGATGATCTGGACTGGACCAAAACAACCGGACAACATTCATCA
GGGTCCGTTCTAGTTGTTCGTATGATTGTGCTGCTATTCCTCAGTACAGT
GTCTGGTACCACGGATCCCTGTCAACACCATGGCGTTATAAACCAGGCGA
GACGAAGCAGCGCCGCTACAGTAGATGACTCTGACCTGGTCATTTGTGAC
ATCTACCTGGACAAGGGCTGGTACCGTTTTACCAGCTACACCGGTGGAGA
GATCCCGACCAGCTGTGTCCAACCGTACCAGTGCAGTACGGAAGTACCGC
TATGGATGGACGGTACTTTACCGGAGGGGGACGACATAGTTAACAGGACG
GCATGCGGGAATCTGGGAGACCCGTCGGACTGTTGTACGATCCCGATAGA
CATCCGAGTCAAACGGTGTACAGAGTCTAGCGGTGTGTTCTACGTGTATG
AGCTGCAACCTACATACTCCTGCCCCATGGCGTATTGTGCGGGAAGTCTT
CCGCTATGTCCAGACGGAGAGGTCTATGACGACTTCCATAAGCATTGTAT
CGAGACCCGGCCTGTCGTACCGTGTGATTTTGAAGGCCATGGGTTTTGTG
AGTGGCTCCAGGAGAGAGACGATGATCTGGACTGGACCAAAACAACCGGA
CAACATTCATCAGGGTCCGTTCTAGTTGTTCGTATGATTGTGCTGCTATT
CCTCAGTACAGTGTCTGGTACCACGGATCCCTGTCAACACCATGGCGTTA
TAAACCAGGCGAGACGAAGCAGCGCCGCTACAGTAGATGACTCTGACCTG
GTCATTTGTGACATCTACCTGGACAAGGGCTGGTACCGTTTTACCAGCTA
CACCGGTGGAGAGATCCCGACCAGCTGTGTCCAACCGTACCAGTGCAGTA
CGGAAGTACCGCTATGGATGGACGGTACTTTACCGGAGGGGGACGACATA
GTTAACAGGACGGCATGCGGGAATCTGGGAGACCCGTCGGACTGTTGTAC
GATCCCGATAGACATCCGAGTCAAACGGTGTACAGAGTCTAGCGGTGTGT
TCTACGTGTATGAGCTGCAACCTACATACTCCTGCCCCATGGCGTATTGT
GCGGGAAGTCTTCCGCTATGTCCAGACGGAGAGGTCTATGACGACTTCCA
TAAGCATTGTATCGAGACCCGGCCTGTCGTACCGTGTGATTTTGAAGGCC
ATGGGTTTTGTGAGTGGCTCCAGGAGAGAGACGATGATCTGGACTGGACC
AAAACAACCGGACAACATTCATCAGGGTCCGTTCTAGTTGTTCGTATGAT
TGTGCTGCTATTCCTCAGTACAGTGTCTGGTACCACGGATCCCTGTCAAC
ACCATGGCGTTATAAACCAGGCGAGACGAAGCAGCGCCGCTACAGTAGAT
GACTCTGACCTGGTCATTTGTGACATCTACCTGGACAAGGGCTGGTACCG
TTTTACCAGCTACACCGGTGGAGAGATCCCGACCAGCTGTGTCCAACCGT
ACCAGTGCAGTACGGAAGTACCGCTATGGATGGACGGTACTTTACCGGAG
GGGGACGACATAGTTAACAGGACGGCATGCGGGAATCTGGGAGACCCGTC
GGACTGTTGTACGATCCCGATAGACATCCGAGTCAAACGGTGTACAGAGT
CTAGCGGTGTGTTCTACGTGTATGAGCTGCAACCTACATACTCCTGCCCC
ATGGCGTATTGTGCGGGAAGTCTTCCGCTATGTCCAGACGGAGAGGTCTA
TGACGACTTCCATAAGCATTGTATCGAGACCCGGCCTGTCGTACCGTGTG
ATTTTGAAGGCCATGGGTTTTGTGAGTGGCTCCAGGAGAGAGACGATGAT
CTGGACTGGACCAAAACAACCGGACAACATTCATCAGGGTCCGTTCTA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000056 | genome | Sc0000056:1068971..1070487 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL86299_cuf0 |
| Biotype | protein_coding |
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