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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL86661_cuf2 >transcript:BL86661_cuf2-protein ID=transcript:BL86661_cuf2-protein|Name=transcript:BL86661_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=136bp
LYNGGLYWDNISGAYDIESPGEETFPAADSGPQVENPERSDGKCCILQKA
GNKGPSTSCIVHYCRETVMDEDGYKKKRVPVTETQTIRMFITVSKDPSAR
RYMDDIRGNDTYKRQINLYNRIRPLFHYTAIAERPK Run BLAST on NCBI mRNA from alignment at Sc0000192:132109..133855+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL86661_cuf2 ID=transcript:BL86661_cuf2|Name=transcript:BL86661_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=1747bp|location=Sequence derived from alignment at Sc0000192:132109..133855+ (Branchiostoma lanceolatum)
CCTGTACAATGGCGGTCTGTATTGGGACAACATTAGCGGGGCATACGACA
TAGAATCACCGGGGTGCGAAAGCTTCTCAACGTTTTGTACATCGAGGAAG
GTTGACACATCGAGTTTTTGGGCAAAGTTATCAAAGTAGCGTCTCGGCAA
AGGCTGCAATATTCAGAGTCATAACTAAACGGTGTGTTTGTGTTTTGGAT
TTGTATCGCCACCACATGTGGAAGGTTTTCCTATCACAGGTCCATTTTCT
CTTGTTTGTACACTGTCACTATGCTTCATGCATGGCGGACGCGTCGACGG
TAAAGCGCAAATGGACCCGGTTGTGTGCCTTTGACTAGCGTTTGTGTTTG
TCGTTGCGGCAATGTTTGATAGTAATTAATGGCTCGAGCTCAAGTCCCTA
GCGACGTGCAACTGAAAGACAGTCAACACCTGAATAGCTCATGGTGTCAT
TCAATGTTTTATTCGTTATCCGTAGGTGCACGTGGCCGATATAGGCATGA
TAGGCTAGTCATTCAGTTTTTGTTAACATGTTCTGTTATCATGTCATGGT
GGTTGAGGGTTGTTGACCTTAATCTCGGAGGTCGCCCCAGGGTTGGCTAG
ACAAAAAAAAGACGACAAAGTAGAAAGCCCGACAAAAACGCCTTAGGACA
CGTCAAAAACCAACCGAAACCCATGCTCTGCTTGGAGAGTAGTGCCCTTG
GTATATAGGCACTTTACATCTCACTCGACTGAGGTGAAAATGAGTTAAGG
GCGTCCTCTCGGATGGGACGTAAATTGGGGGTCCCGTGTTTGAGGAAAGC
TACACCTCGAGCACGTTAAATAACTCACCGCACTTATCGAAAATAGTAGA
AATCTTTCCCGCTGGATCAAACCTTACAGTCCGGTCTTACGCAGCTTGTA
CCTACTGCACAAAACTGGTGTGTTATTTTCTAAAGGTGGTTTATCTGTTA
TGCGGAACAAACAAATGTCCGGGGAAAGAAACAACACGAGCTGTAGCTTG
GTAGGGAATAAACAAGCTTTTTGATAACACTATATAAATGTTGTAACAAC
AAAAAGCACAATGATATTCATAAAAGAACAATGGTGGTATGATCGACCGA
ACTGAAGTCTCCGAACTTTTTGTGTCGAGTTTTGTTTTCATTTAGGGTCT
TTATATTGACGTGAGATAGAAATTACCTTTCACATATTGACATTTCTCCG
TCTGTCGTCAACAGATTTCCACAGGGAAGAAACCTTTCCGGCTGCCGACA
GTGGCCCCCAGGTCGAGAACCCGGAACGATCAGATGGGAAATGTTGCATT
CTTCAAAAAGCCGGTAATAAAGGACCGTCAACGTCCTGTATAGTGCATTA
CTGTCGAGAGACGGTCATGGATGAGGACGGCTACAAGAAAAAAAGGGTAC
CTGTAACTGAGACACAAACTATTCGTATGTTTATAACTGTTTCAAAAGAT
CCATCTGCACGTAGATACATGGATGACATCCGGGGAAACGACACCTATAA
AAGACAGATTAATCTCTACAACAGGATAAGACCGCTTTTCCACTATACGG
CGATCGCCGAGCGACCAAAATAGGAATTGTGTGACCCTTTATTTCATAAC
AATGATTGTAATTTGAGGCACGATGGAAAAGTATTATTTTAATGATAGTA
AGACACACAAACTGTTGAGAAATTAGTTGAGCGATCTATCAAATAGTTGG
TCTCTCATCGGTCGCATCCTCTTCTCGAAAGGGGGAGCAAAGAAGAC Coding sequence (CDS) from alignment at Sc0000192:132109..133855+ >transcript:BL86661_cuf2 ID=transcript:BL86661_cuf2|Name=transcript:BL86661_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=822bp|location=Sequence derived from alignment at Sc0000192:132109..133855+ (Branchiostoma lanceolatum)
CTGTACAATGGCGGTCTGTATTGGGACAACATTAGCGGGGCATACGACAT
AGAATCACCGGGGGAAGAAACCTTTCCGGCTGCCGACAGTGGCCCCCAGG
TCGAGAACCCGGAACGATCAGATGGGAAATGTTGCATTCTTCAAAAAGCC
GGTAATAAAGGACCGTCAACGTCCTGTATAGTGCATTACTGTCGAGAGAC
GGTCATGGATGAGGACGGCTACAAGAAAAAAAGGGTACCTGTAACTGAGA
CACAAACTATTCGTATGTTTATAACTGTTTCAAAAGATCCATCTGCACGT
AGATACATGGATGACATCCGGGGAAACGACACCTATAAAAGACAGATTAA
TCTCTACAACAGGATAAGACCGCTTTTCCACTATACGGCGATCGCCGAGC
GACCAAAATAGCTGTACAATGGCGGTCTGTATTGGGACAACATTAGCGGG
GCATACGACATAGAATCACCGGGGGAAGAAACCTTTCCGGCTGCCGACAG
TGGCCCCCAGGTCGAGAACCCGGAACGATCAGATGGGAAATGTTGCATTC
TTCAAAAAGCCGGTAATAAAGGACCGTCAACGTCCTGTATAGTGCATTAC
TGTCGAGAGACGGTCATGGATGAGGACGGCTACAAGAAAAAAAGGGTACC
TGTAACTGAGACACAAACTATTCGTATGTTTATAACTGTTTCAAAAGATC
CATCTGCACGTAGATACATGGATGACATCCGGGGAAACGACACCTATAAA
AGACAGATTAATCTCTACAACAGGATAAGACCGCTTTTCCACTATACGGC
GATCGCCGAGCGACCAAAATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000192 | genome | Sc0000192:132109..133855 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL86661_cuf2 |
| Biotype | protein_coding |
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