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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL86905_cuf2 >transcript:BL86905_cuf2-protein ID=transcript:BL86905_cuf2-protein|Name=transcript:BL86905_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=203bp
MDSMVQSPDTERTSLPDILSDQSEMDIKAISERKVPNGMAVESRHDSGNW
QDVEDFRKSNTEIPWYYDTDDDEDIGNKPKLADKLKTWCCNTFWNSWECC
SCFKRFQAILSLFVMDPLIDLLITLCIVLNTMFMAMDHYGKSESFELTLK
TGNYVSTIRSLLQTIDCKKNENVNGCGSITCLNMSETPTPGTSTVNLSLL
LFR Run BLAST on NCBI mRNA from alignment at Sc0000418:186720..188787+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL86905_cuf2 ID=transcript:BL86905_cuf2|Name=transcript:BL86905_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=2068bp|location=Sequence derived from alignment at Sc0000418:186720..188787+ (Branchiostoma lanceolatum)
CACGGTTCCAGCGATTCCCTGGACAAAACAGGCAGCAAACGCGGCAGTAG
GTTCGTCAAAAGGCCTACATTTCATAATACTTTAAAATACATTTTCTTGC
GTCATTACATTAGTGAGTGTTAAAGAACATTTGCATGCAAACTCTACCTC
TGAAACAGCATCAATAGGTGCCAAGCGAACCGACTATTTCACATGGCCAA
GGATGTAAACAAGACAAATCAACTGCATTGATGTGATCTTAGATTCGTGA
TATGAGTTGTAATTCAAATTAAGTAATAGTATGATTCATCACTTAACGTT
ATATATAAGTTGATGGCAAACTTGCTTCTATTCTATAATTTTACATCTCT
ATCAAAAGAGGTATGAACTTATACTACATTTGCACTGAGAATACACATGT
AGTTCTGAAAAATAAACATTTTGATGAGTGACTATTTGATATGGTTGTTC
ACAGATTCAGCCTTCACAGCGTAATCTTGCGGAGTAGATCGTATGAATTG
TTGAACGACAGCGTTGTCCAAAGTTTCACTATGGACAGCATGGTTCAGAG
CCCAGATACAGAAAGAACGTCACTTCCAGACATCCTTAGCGACCAATCGG
AGATGGATATAAAGGTAAATGTTTCTAACATGCCGTAGTGTACAGAGCGG
TATGGTAATTAACCACATCAGTTGCCAATCAGATTTGGCCACAGTTGGGA
AGAGCTCTGCAAGTGTAGTATTTCGTGTTTTTGTCGCCAGTAACGTAGTA
TACATGTAGTAATAAAGGTGGCCTGTACAGACACGTCCTCCCCTGAAGTC
CATGCTCGTGAATATCACCAGATCATCATTGACATCCTCTTGGGTCCAAC
GTGATGACAAGATAGAAACACTACCACAGTGTATGTATACGTATCTTTGA
AGCTCTTTTTGTACACTTTTGATTAAGGAAACGTTGTATTGATATTAACG
TTACTATGCTTTTGATAATTCATTATGTGAGTTGAAAGTTGGATGCATAT
GCAATCGTTGTGCCTGCTGCATTTGTCACATCCTTACAGGCCATTTCAGA
GCGAAAGGTTCCAAATGGGATGGCGGTAGAATCGCGTCATGACTCTGGCA
ATTGGCAAGATGTCGAAGACTTCAGGAAATCGAACACGGAAATACCCTGT
AAGATTCTTTAGATTACATATAACCCGGGTAAAGCATATTGCTGTCCTTT
TGAATTATTCACGACATGCTCTGAATGGACGAGTAACGTCTACAATGGCT
TATGCTTTGAATTCTTTTCAAATGTTCGACTTCCTTGCAAATATGAATGC
GTCTTTACATACAAGCCAATTTCCTCTCTGAATTATGCTTGTTATGTTCT
GTTGTTTTCTAGCTTTAGAATTACTTGACTAAAAGCCGTTTTTCACCGTT
ACTACTATACCAAGAATGTTTTCTCGTCCCGTTAACAGGGTACTATGACA
CAGATGACGATGAGGACATTGGAAATAAACCAAAGCTGGCGGACAAGTTG
AAAACCTGGTGCTGCAATACCTTTTGGAACAGCTGGGAGTGTTGTTCTTG
CTTCAAACGATTTCAAGCAATTCTGTCCCTTTTTGTCATGGACCCGTTAA
TAGACCTATTGATCACTCTATGTATTGTTCTGAACACAATGTTCATGGCC
ATGGACCATTACGGCAAAAGCGAGTCTTTTGAGCTGACCCTTAAAACCGG
AAATTACGTAAGTACAATCAGGTCATTGCTACAAACTATCGACTGTAAAA
AAAATGAAAATGTAAACGGATGCGGGTCAATTACATGTCTTAATATGTCA
GAAACACCGACTCCGGGAACATCTACGGTCAATTTGTCTCTTTTGCTGTT
TAGGTAAATAAACAGGGGTCATATAGTTTCCTGTCCAGGTAAAAAGGGGG
GGGGGGGCATGTAACTTTGCATGAAATCTCATATTCGTGGATAGCTAGAA
TGCGCTCTTGAAAAAACAATACAAAAGTCTGACCCTTTTTTTCGTCCGTC
AATCTGCAGCCCTCATCAGAATTGAATTAGCAATCACTCAGAGCAAAATG
AGGGCCGCAGTTCTGATA Coding sequence (CDS) from alignment at Sc0000418:186720..188787+ >transcript:BL86905_cuf2 ID=transcript:BL86905_cuf2|Name=transcript:BL86905_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=1836bp|location=Sequence derived from alignment at Sc0000418:186720..188787+ (Branchiostoma lanceolatum)
ATGGACAGCATGGTTCAGAGCCCAGATACAGAAAGAACGTCACTTCCAGA
CATCCTTAGCGACCAATCGGAGATGGATATAAAGGCCATTTCAGAGCGAA
AGGTTCCAAATGGGATGGCGGTAGAATCGCGTCATGACTCTGGCAATTGG
CAAGATGTCGAAGACTTCAGGAAATCGAACACGGAAATACCCTGGTACTA
TGACACAGATGACGATGAGGACATTGGAAATAAACCAAAGCTGGCGGACA
AGTTGAAAACCTGGTGCTGCAATACCTTTTGGAACAGCTGGGAGTGTTGT
TCTTGCTTCAAACGATTTCAAGCAATTCTGTCCCTTTTTGTCATGGACCC
GTTAATAGACCTATTGATCACTCTATGTATTGTTCTGAACACAATGTTCA
TGGCCATGGACCATTACGGCAAAAGCGAGTCTTTTGAGCTGACCCTTAAA
ACCGGAAATTACGTAAGTACAATCAGGTCATTGCTACAAACTATCGACTG
TAAAAAAAATGAAAATGTAAACGGATGCGGGTCAATTACATGTCTTAATA
TGTCAGAAACACCGACTCCGGGAACATCTACGGTCAATTTGTCTCTTTTG
CTGTTTAGGTAAATGGACAGCATGGTTCAGAGCCCAGATACAGAAAGAAC
GTCACTTCCAGACATCCTTAGCGACCAATCGGAGATGGATATAAAGGCCA
TTTCAGAGCGAAAGGTTCCAAATGGGATGGCGGTAGAATCGCGTCATGAC
TCTGGCAATTGGCAAGATGTCGAAGACTTCAGGAAATCGAACACGGAAAT
ACCCTGGTACTATGACACAGATGACGATGAGGACATTGGAAATAAACCAA
AGCTGGCGGACAAGTTGAAAACCTGGTGCTGCAATACCTTTTGGAACAGC
TGGGAGTGTTGTTCTTGCTTCAAACGATTTCAAGCAATTCTGTCCCTTTT
TGTCATGGACCCGTTAATAGACCTATTGATCACTCTATGTATTGTTCTGA
ACACAATGTTCATGGCCATGGACCATTACGGCAAAAGCGAGTCTTTTGAG
CTGACCCTTAAAACCGGAAATTACGTAAGTACAATCAGGTCATTGCTACA
AACTATCGACTGTAAAAAAAATGAAAATGTAAACGGATGCGGGTCAATTA
CATGTCTTAATATGTCAGAAACACCGACTCCGGGAACATCTACGGTCAAT
TTGTCTCTTTTGCTGTTTAGGTAAATGGACAGCATGGTTCAGAGCCCAGA
TACAGAAAGAACGTCACTTCCAGACATCCTTAGCGACCAATCGGAGATGG
ATATAAAGGCCATTTCAGAGCGAAAGGTTCCAAATGGGATGGCGGTAGAA
TCGCGTCATGACTCTGGCAATTGGCAAGATGTCGAAGACTTCAGGAAATC
GAACACGGAAATACCCTGGTACTATGACACAGATGACGATGAGGACATTG
GAAATAAACCAAAGCTGGCGGACAAGTTGAAAACCTGGTGCTGCAATACC
TTTTGGAACAGCTGGGAGTGTTGTTCTTGCTTCAAACGATTTCAAGCAAT
TCTGTCCCTTTTTGTCATGGACCCGTTAATAGACCTATTGATCACTCTAT
GTATTGTTCTGAACACAATGTTCATGGCCATGGACCATTACGGCAAAAGC
GAGTCTTTTGAGCTGACCCTTAAAACCGGAAATTACGTAAGTACAATCAG
GTCATTGCTACAAACTATCGACTGTAAAAAAAATGAAAATGTAAACGGAT
GCGGGTCAATTACATGTCTTAATATGTCAGAAACACCGACTCCGGGAACA
TCTACGGTCAATTTGTCTCTTTTGCTGTTTAGGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000418 | genome | Sc0000418:186720..188787 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL86905_cuf2 |
| Biotype | protein_coding |
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