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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL87315_cuf2 >transcript:BL87315_cuf2-protein ID=transcript:BL87315_cuf2-protein|Name=transcript:BL87315_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=127bp
MLDYVKGGSEMPQTDTHWISESGVIDVFFMLGPRPAEVFSQYTDLTGKPA
MPPLFAIAYHQSRWNYNDEEDVKNVDAGFDDNDIPYDVLWLDIEHTDGKR
YMTWDKHKFPHPVDMQDKVAAKGRKVS Run BLAST on NCBI mRNA from alignment at Sc0000047:1749466..1752480+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL87315_cuf2 ID=transcript:BL87315_cuf2|Name=transcript:BL87315_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=3015bp|location=Sequence derived from alignment at Sc0000047:1749466..1752480+ (Branchiostoma lanceolatum)
GTTTCTTTTACTTTGGTGTTTGTGTTGGTTCTCTACGTATACTGGGCACA
TAGTGGATCTCCGCTAAGGTTCGTCCGGTGGGATTTTCATGTTCCATTTT
ATTACCCTCCCACCAAGCAGGCATTGCAACAAGTCAGGTGGCATGCATGT
GATACAGAATGGCACTTGCAAGTCATCATTTTTTTTACCGTTTCCCTAGC
CTACTATCCATCCAATTCTAGTTCCTATGATGGCTTCCCTGTAGACTAGT
TTGGTACCTGTTAATAGATAAACGATTGGCATTTATTAATGAATATCCCT
TAAAAATTTGTGTGAGAGCTCTGATTGGCTCTGAGTAGCACGGTTCTCTG
TAACAGCATGCTCAAACGCATTTGGAAGCTTGATCCCACTCCCAGTTATG
CTACTTGTAAGAAATATTCAGAGCCAGTGAGAGTTCTCGCTTGTATTTGA
TACAAATATTTGAATGTCAGTCATTCCTCTATCAACCGGTGCCTGACTAT
TTTACAGGGAGCTAGTCAAGAATAGAATGGATACAAGGCTACAATTTCCC
TGCATGGTTATATCATTTGCCAAAAAAAGTTGTTTAAAGAAATTGCTTTT
TCTGTTTTTGTCAGTTTTGCCCATTTTAAGGTAACAGTGGAGATAGTAAG
TGACTAGGCTGCACACTTTTAGTCCCTCTTGCTTCTTGACACTCTTCTAC
ATGTACATGTAGAGAATCTATCTTGTAGGCTGGGTATCATCCAGAAGCAT
GAAGTTACCAAATTTTGGATTCCATCTCAATATGCTTTTGCAGTCTGACT
AAAGGGTATCTTTTTGATAGGCCAATTTTTGAAACTGTGCTCGGCTACCA
AAATTAGTAGTAGTTCACTGTGTTCTGCTGCTGCAATGGTCTGAACAATC
AGCTACAATCAGTCTTTTCTACAAAAATTAGTGCTGCCGGTATTGAAATA
GCCATCCCACAATATCATCTTTGATGGAAATGAAAGATGTCTGATTGACT
TCCCTTTCAAATTTGGAAAAAGGAAAATACTTTAAAGTAAAAGAAAACGG
TATGTGTATCATCTCTCTTCTTTCTGGATAATACTCTGCTGTAGAACCTT
ACGCATGGGAGGGAGGCTTGTGACGCTGTTGATGTGCATCACGAGTTGTT
TGGATCAGCTTGGACATTTTGTTTGCAGTGTGCTCTGTATGAAACTTCGG
GTCTTCTTTTGCATGGCGTATTTATATTGTTAACTTTTTGTAAACAATTG
AACTTGTCAGAAAAAAGATTTGATCTTTATTTTAGAAAGATGTAGTAAAA
TGAAATATAGTAAATCCCACAAATAGTTTTGACAAGAAGGGATAGATGAG
TCACTACTGTTAAAAACAGTGATAGTGAAAAAATAGTTTTAATCTATCAA
AACTATTTTTTCGCTATCACTGCTTTTTAAGGTAGTCCATCTTGAAGCAA
ACTTCAGTGTCACTGAAATGATTTTTGGTGTTGAATGACTTTAAATATAT
ATGTTTAACATAAAGGCGTCAAATGGCAAGATATCTCCAAAGCTTTTTTC
AACAGTATCTCTCTCTGTCTCACAATCTTGCCACATTTCGTATTTTTGTT
CCTCTGTAGACTGTGTTTGGGAAGATGCTGGACTATGTGAAGGGAGGGAG
TGAGATGCCGCAGACCGACACCCACTGGATATCAGAGAGTGGAGTGATCG
ACGTGTTCTTCATGCTGGGGCCGAGGCCTGCAGAAGTCTTCTCACAGTAC
ACAGACCTGACCGGCAAACCAGCCATGCCTCCTGTACGTTAATGATGTTT
TTTACGTCTTTCTCCAATCTTTCGAATTGCATCAGACTTTGGCATACAAT
GTTGAAGTTGAAGTTTTGTATTTCATAAAGAACAAGAACTTAGATGTATT
GTAGGGTTGATGAAGGTTAGACATCCAGGTAATAAGATACGCCAAAAATA
ATTACTCAAGCAACTGGATAAGATTTTGAAAAATCTTATCCAGTTGCTTC
AGTAATTATTTTTGGCGTATTGTAGGGTTATTATGTCAAAAAGGTAGCTT
AACCATTGTTGGAAACTGCCAAACAGTATAATTTACTTCTGTGTACCAGT
TTGTTTCTTAGTGTTTTGCTCAATGAAATCAAATCCACTATTTCTCCTAT
GCAGCTGTACAGTAATAATAGCATTATCCATCCTTTTACAGCTGTTTGCC
ATTGCCTACCACCAGAGTAGGTGGAACTACAATGATGAAGAAGATGTCAA
GAAGTGAGCTGCCATTTCTATTGTTTGATATCTGACATAGACATTACAGA
TTATTATTTAATAGTAGGGCACATTATAAGTTTAGTACAAAATCATGACT
GAAAGTTGAAAACTTTACAGATGTGTGTACAGATGAATGTTTTAGGCATA
ATAGGTTATGCATGACATTGTATAATATAAAGAGTCTGATTTATTACTGA
CATCTCTATTGCTGTTCCCTTACAGTGTTGATGCAGGGTTTGATGACAAT
GACATTCCATATGATGTCCTCTGGCTAGACATTGAGCACACTGATGGCAA
AAGGTGAGCTGAAACTTCAGTTGAATTCAGCTAGATATTTCATAGTCACA
GCAGATTGATATGCTTCACTGTTACTGCTTGAAAAAATGTTTATTATCTG
TCACTGTGATACTTCTGTGTTTTTGTTCCTCTTGTTGCTCTGACTAAGAT
TCAAGCAATCAACAAGCACATCTTCATGAAGTCACAGCTTATTTATGGCG
TATATGTATACATAATGTACTACTGCAAGTTGTGTTATTATGTGATGTAC
ACTGTACATACATCAGGTAATAACTGATAGGTGAGTGTGTAAAAAGATAA
AGCATGCAACTCGAAGTTTAATGCTTGAGATGAATCATAATGCTTGAACA
CCTGATAAACGGTATGTTCCCTTTACCCCTCAGGTACATGACCTGGGACA
AGCACAAGTTCCCCCACCCTGTCGACATGCAGGACAAGGTCGCAGCAAAG
GGCAGGAAGGTGAGC Coding sequence (CDS) from alignment at Sc0000047:1749466..1752480+ >transcript:BL87315_cuf2 ID=transcript:BL87315_cuf2|Name=transcript:BL87315_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=1524bp|location=Sequence derived from alignment at Sc0000047:1749466..1752480+ (Branchiostoma lanceolatum)
ATGCTGGACTATGTGAAGGGAGGGAGTGAGATGCCGCAGACCGACACCCA
CTGGATATCAGAGAGTGGAGTGATCGACGTGTTCTTCATGCTGGGGCCGA
GGCCTGCAGAAGTCTTCTCACAGTACACAGACCTGACCGGCAAACCAGCC
ATGCCTCCTCTGTTTGCCATTGCCTACCACCAGAGTAGGTGGAACTACAA
TGATGAAGAAGATGTCAAGAATGTTGATGCAGGGTTTGATGACAATGACA
TTCCATATGATGTCCTCTGGCTAGACATTGAGCACACTGATGGCAAAAGG
TACATGACCTGGGACAAGCACAAGTTCCCCCACCCTGTCGACATGCAGGA
CAAGGTCGCAGCAAAGGGCAGGAAGGTGAGCATGCTGGACTATGTGAAGG
GAGGGAGTGAGATGCCGCAGACCGACACCCACTGGATATCAGAGAGTGGA
GTGATCGACGTGTTCTTCATGCTGGGGCCGAGGCCTGCAGAAGTCTTCTC
ACAGTACACAGACCTGACCGGCAAACCAGCCATGCCTCCTCTGTTTGCCA
TTGCCTACCACCAGAGTAGGTGGAACTACAATGATGAAGAAGATGTCAAG
AATGTTGATGCAGGGTTTGATGACAATGACATTCCATATGATGTCCTCTG
GCTAGACATTGAGCACACTGATGGCAAAAGGTACATGACCTGGGACAAGC
ACAAGTTCCCCCACCCTGTCGACATGCAGGACAAGGTCGCAGCAAAGGGC
AGGAAGGTGAGCATGCTGGACTATGTGAAGGGAGGGAGTGAGATGCCGCA
GACCGACACCCACTGGATATCAGAGAGTGGAGTGATCGACGTGTTCTTCA
TGCTGGGGCCGAGGCCTGCAGAAGTCTTCTCACAGTACACAGACCTGACC
GGCAAACCAGCCATGCCTCCTCTGTTTGCCATTGCCTACCACCAGAGTAG
GTGGAACTACAATGATGAAGAAGATGTCAAGAATGTTGATGCAGGGTTTG
ATGACAATGACATTCCATATGATGTCCTCTGGCTAGACATTGAGCACACT
GATGGCAAAAGGTACATGACCTGGGACAAGCACAAGTTCCCCCACCCTGT
CGACATGCAGGACAAGGTCGCAGCAAAGGGCAGGAAGGTGAGCATGCTGG
ACTATGTGAAGGGAGGGAGTGAGATGCCGCAGACCGACACCCACTGGATA
TCAGAGAGTGGAGTGATCGACGTGTTCTTCATGCTGGGGCCGAGGCCTGC
AGAAGTCTTCTCACAGTACACAGACCTGACCGGCAAACCAGCCATGCCTC
CTCTGTTTGCCATTGCCTACCACCAGAGTAGGTGGAACTACAATGATGAA
GAAGATGTCAAGAATGTTGATGCAGGGTTTGATGACAATGACATTCCATA
TGATGTCCTCTGGCTAGACATTGAGCACACTGATGGCAAAAGGTACATGA
CCTGGGACAAGCACAAGTTCCCCCACCCTGTCGACATGCAGGACAAGGTC
GCAGCAAAGGGCAGGAAGGTGAGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000047 | genome | Sc0000047:1749466..1752480 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL87315_cuf2 |
| Biotype | protein_coding |
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