|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL87477_cuf0 >transcript:BL87477_cuf0-protein ID=transcript:BL87477_cuf0-protein|Name=transcript:BL87477_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=116bp
MVLFLDFEKAFDCVEHNFMFKVLEKFNFGPNFIQWVKIIYTDCLASVINN
GWKTASFQIQRGIRQGCPLSALLFLFVAEILFYSMQTNSNIKGIKVNEEE
IKLCQVADDTTVFLSH Run BLAST on NCBI mRNA from alignment at Sc0000269:55764..57104+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL87477_cuf0 ID=transcript:BL87477_cuf0|Name=transcript:BL87477_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1341bp|location=Sequence derived from alignment at Sc0000269:55764..57104+ (Branchiostoma lanceolatum)
TTATCGACGAGCGAGGTTCCCCAGCAGCCTACAAACATGGCCGCTAAACT
GTTTACAGAGTACGCATAAAATCAGTTCACAGCATACAAGTGTTCCAAGG
CCTGCAGCCACGTAGTACAGTGTCTTGAGTGTCGTGAGAAATTTTGCTGA
CAGGGAGTACGTTATGATCGGGAAAGTTCGACGTTGAAAGACCCCCAGTT
TATGAATGAACGTATCTCTAGCAACGACTACACGGTGCCGCGACTGTGTT
ACACAACGGGCCTGTAACTTGCTTTTACAGAAACACTTACCAATTGGAGA
CCGATAAGCCTATTAAATACTGATTATAAAATCCTAGCCTTTATCTTGGC
TAATAGGATTAAACCCCATCTAGAAAACCTAATTAACAAGGATCAATGTG
CCTACATTAAAGGGAGATTTATAGGACAAAACGTTAGATTAATACAAGAT
ATAATTGATTTCTGTGACACTAAAAATCTACAAGGAATGGTGTTATTTTT
AGATTTCGAAAAAGCTTTCGATTGTGTGGAACATAACTTTATGTTTAAGG
TCTTAGAGAAGTTCAATTTTGGCCCCAACTTTATACAATGGGTCAAAATT
ATCTACACTGACTGCCTAGCTTCAGTTATTAACAACGGGTGGAAAACAGC
TAGCTTTCAAATTCAGAGAGGTATAAGACAAGGATGCCCCTTAAGTGCCT
TGCTTTTTTTATTTGTGGCAGAAATCTTATTTTATAGTATGCAAACCAAT
AGTAACATTAAGGGTATAAAAGTGAATGAAGAAGAGATAAAACTCTGCCA
AGTAGCTGACGACACTACAGTATTCTTATCNCATTAGGGGTATAAAAGTG
AATGAAGAAGAGATAAAACTCTGCCAAGTAGCTGACGACACTACAGTATT
CTTATCAACAGAGGAATCACTACATGAAGCACTTAGATGTCTTAGGTCAT
TCTCAAGTGTTGCTGGACCCATTCTAAATAAAGCCAAGACAAAAGGATTG
TGGATAGGCACATGGAAGACAAAAAAGAAGGACATAGGGGGAATTACATG
GCCGTTAACACCAATAAAATCACTGGGTGTGTACTTTGGTCATTGTAGTA
AGAGTTTAATAAAATTAAACTGGGAAGACAAAGTGAAACAGATAAAGACA
ATACTTAACACCTGGCGACAAAGAAATCTTACACTTTTTGGAAAAATTAC
CATTGTAAAATCATTAGCAGCGGCTAAAGTAACATATATCATGAATGTAA
TGCCAGCACCCTTGTCTATATTGAAAGAATTAAACACTGCTTTTTTCAAC
TTTGTGTGGAGTGGAAAAGGGGATAAAATAAAAAGAAAAAC Coding sequence (CDS) from alignment at Sc0000269:55764..57104+ >transcript:BL87477_cuf0 ID=transcript:BL87477_cuf0|Name=transcript:BL87477_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=351bp|location=Sequence derived from alignment at Sc0000269:55764..57104+ (Branchiostoma lanceolatum)
ATGGTGTTATTTTTAGATTTCGAAAAAGCTTTCGATTGTGTGGAACATAA
CTTTATGTTTAAGGTCTTAGAGAAGTTCAATTTTGGCCCCAACTTTATAC
AATGGGTCAAAATTATCTACACTGACTGCCTAGCTTCAGTTATTAACAAC
GGGTGGAAAACAGCTAGCTTTCAAATTCAGAGAGGTATAAGACAAGGATG
CCCCTTAAGTGCCTTGCTTTTTTTATTTGTGGCAGAAATCTTATTTTATA
GTATGCAAACCAATAGTAACATTAAGGGTATAAAAGTGAATGAAGAAGAG
ATAAAACTCTGCCAAGTAGCTGACGACACTACAGTATTCTTATCNCATTA
G
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000269 | genome | Sc0000269:55764..57104 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL87477_cuf0 |
| Biotype | protein_coding |
|
