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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL87529_cuf0 >transcript:BL87529_cuf0-protein ID=transcript:BL87529_cuf0-protein|Name=transcript:BL87529_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=185bp
MVTLHEVITFLVSMQISISSLQTHNVNRCGRSRHLARKLSLRRKRSSPNV
FEMAATETITSIILIKLIRVSLGTVRHPRRFKIVVIDIQITLKQMLRDFI
GIRVNRAKKSGMVNITSSVNSRERSGINTILHELNPLFTINVTMRDIKSK
NVYSRVNSKATTQWRKTESANGVHLEGVASDNRSS Run BLAST on NCBI mRNA from alignment at xfSc0001779:1..2634+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL87529_cuf0 ID=transcript:BL87529_cuf0|Name=transcript:BL87529_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2634bp|location=Sequence derived from alignment at xfSc0001779:1..2634+ (Branchiostoma lanceolatum)
AATGCAATGAAGAAAACCACCATTACCAGCATTAACCGTCAAACTATCAA
AATATAACGTTGACGATGTAGCTTTAGGTGTCTGTAAAACAGGTGCCGAA
GAAGCTGGAGTAACAGAAGTGAGAACCAGCTTATCAGAAAAAAAGTTTGA
ATTATGGCGAGAAATAAAAGTCTGAAACATGATTAAACTCCTAAGCAGAA
AACCTACCGCGCTTCGCTTGGTCAACCCCTCAGCGGCAAAAATTAAAATT
TTTACCGCTTCGGCGTTATAACCTCACACTCAATCTTTTATCACGAAGTC
ATGATTGAATCGCGAGTGGTCGGCAGATTGCGATAAACGGTCACATTAAA
TTTAACCTGACTATTCCACTGCAACAACTGAACGGACTGGAAACACTGGT
CATAATCATGGTGGCGAATAAGTACGCGTTCTTGCAAATCACCAGAAGGC
GGTTCCTGAATGAATGGGAAGCCTTCAAGAAGGTGATAAGCAGGAGAAAC
ATACGAAGGCGCATAACGATACCACTGACCCTCAGCAATCTTAAACTTCT
TAGACGAATCACCAGAACGGAAAACATCCTTCATAGAAATTTCACGCGGC
GGCAAGTTGCCATACAAAACAGGGTCGCCAGCAATATCGGTATAAGTCAA
AGCACCTTTAGCGTTAAGGTACTGAATCTCTTTAGTCGCAGTAGGCGGAA
AACGAACAAGCGCAAGAGTAAACATAGTGCCATGCTCAGGAACAAAGAAA
CGCGGCACAGAATGTTTATAGGTCTGTTGAACACGACCAGAAAACTGGCC
TAACGACGTTTGGTCAGTTCCATCAACATCATAGCCAGATGCCCAGAGAT
TAGAGCGCATGACAAGTAAAGGACGGTTGTCAGCGTCATAAGAGGTTTTA
CCTCCAAATGAAGAAATAACATCATGGTAACGCTGCATGAAGTAATCACG
TTCTTGGTCAGTATGCAAATTAGCATAAGCAGCTTGCAGACCCATAATGT
CAATAGATGTGGTAGAAGTCGTCATTTGGCGAGAAAGCTCAGTCTCAGGA
GGAAGCGGAGCAGTCCAAATGTTTTTGAGATGGCAGCAACGGAAACCATA
ACGAGCATCATCTTGATTAAGCTCATTAGGGTTAGCCTCGGTACGGTCAG
GCATCCACGGCGCTTTAAAATAGTTGTTATAGATATTCAAATAACCCTGA
AACAAATGCTTAGGGATTTTATTGGTATCAGGGTTAATCGTGCCAAGAAA
AGCGGCATGGTCAATATAACCAGTAGTGTTAACAGTCGGGAGAGGAGTGG
CATTAACACCATCCTTCATGAACTTAATCCACTGTTCACCATAAACGTGA
CGATGAGGGACATAAAAAGTAAAAATGTCTACAGTAGAGTCAATAGCAAG
GCCACGACGCAATGGAGAAAGACGGAGAGCGCCAACGGCGTCCATCTCGA
AGGAGTCGCCAGCGATAACCGGAGTAGTTGAAATGGTAATAAGACGACCA
ATCTGACCAGCAAGGAAGCCAAGATGGGAAAGGTCATGCGGCATACGCTC
GGCGCCAGTTTGAATATTAGACATAATTTATCCTCAAGTAAGGGGCCGAA
GCCCCTGCAATTAAAATTGTTGACCACCTACATACCAAAGACGAGCGCCT
TTACGCTTGCCTTTAGTACCTCGCAACGGCTGCGGACGACCAGGGCGAGC
GCCAGAACGTTTTTTACCTTTAGACATTACATCACTCCTTCTGCACGTAA
TTTTTGACGCACGTTTTCTTCTGCGTCAGTAAGAACGTCAGTGTTTCCTG
CGCGTACACGCAAGGTAAACGCGAACAATTCAGCGGCTTTAACCGGACGC
TCGACGCCATTAATAATGTTTTCCGTAAATTCAGCGCCTTCCATGATGAG
ACAGGCCGTTTGAATGTTGACGGGATGAACATAATAAGCAATGACGGCAG
CAATAAACTCAACAGGAGCAGGAAAGCGAGGGTATCCTACAAAGTCCAGC
GTACCATAAACGCAAGCCTCAACGCAGCGACGAGCACGAGAGCGGTCAGT
AGCAATCCAAACTTTGTTACTCGTCAGAAAATCGAAATCATCTTCGGTTA
AATCCAAAACGGCAGAAGCCTGAATGAGCTTAATAGAGGCCAAAGCGGTC
TGGAAACGTACGGATTGTTCAGTAACTTGACTCATGATTTCTTACCTATT
AGTGGTTGAACAGCATCGGACTCAGATAGTAATCCACGCTCTTTTAAAAT
GTCAACAAGAGAATCTCTACCATGAACAAAATGTGACTCATATCTAAACC
AGTCCTTGACGAACGTGCCAAGCATATTAAGCCACTTCTCCTCATCCAAC
GCGTCAGTTTTTGACAGAATCGTTAGTTGATGGCGAAAGGTCGCAAAGTA
AGAGCTTCTCGAGCTGCGCAAGGATAGGTCGAATTTTCTCATTTTCCGCC
AGCAGTCCACTTCGATTTAATTCGTAAACAAGCAGTAGTAATTCCTGCTT
TATCAAGATAATTTTTCGACTCATCAGAAATATCCGAAAGTGTTAACTTC
TGCGTCATGGAAGCGATAAAACTCTGCAGGTTGGATACGCCAATCATTTT
TATCGAAGCGCGCATAAATTTGAGCAGATTTGTC Coding sequence (CDS) from alignment at xfSc0001779:1..2634+ >transcript:BL87529_cuf0 ID=transcript:BL87529_cuf0|Name=transcript:BL87529_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=558bp|location=Sequence derived from alignment at xfSc0001779:1..2634+ (Branchiostoma lanceolatum)
ATGGTAACGCTGCATGAAGTAATCACGTTCTTGGTCAGTATGCAAATTAG
CATAAGCAGCTTGCAGACCCATAATGTCAATAGATGTGGTAGAAGTCGTC
ATTTGGCGAGAAAGCTCAGTCTCAGGAGGAAGCGGAGCAGTCCAAATGTT
TTTGAGATGGCAGCAACGGAAACCATAACGAGCATCATCTTGATTAAGCT
CATTAGGGTTAGCCTCGGTACGGTCAGGCATCCACGGCGCTTTAAAATAG
TTGTTATAGATATTCAAATAACCCTGAAACAAATGCTTAGGGATTTTATT
GGTATCAGGGTTAATCGTGCCAAGAAAAGCGGCATGGTCAATATAACCAG
TAGTGTTAACAGTCGGGAGAGGAGTGGCATTAACACCATCCTTCATGAAC
TTAATCCACTGTTCACCATAAACGTGACGATGAGGGACATAAAAAGTAAA
AATGTCTACAGTAGAGTCAATAGCAAGGCCACGACGCAATGGAGAAAGAC
GGAGAGCGCCAACGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGA
GTAGTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0001779 | genome | xfSc0001779:1..2634 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL87529_cuf0 |
| Biotype | protein_coding |
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