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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL87533_cuf0 >transcript:BL87533_cuf0-protein ID=transcript:BL87533_cuf0-protein|Name=transcript:BL87533_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=300bp
CIINFERRSDKDMFLKLTSKLTLENGGFSVANIHRPLDIPEFDIIDLRFQ
KFLLGVHSKSSNDGVREELGTFPIILSAKNQLIKYWHRLVNLPEDSLLHE
AYNVVFSSDHDWINHVKDILNYHGLGYIWMNPKCYKVDYIEQQLKCRLQD
AHIQEWFGCVSNNSKLSLLHKSKNHYIQEKYLHDVNNVEIRKAITQLRIS
SHILNIETGRYFNVAPDQRFCPFCPNRIEDEFHFIMECTKYDALRDELFT
SLNSSTSDFKTLNATDRFDYIFKCNSPYNVKIGKYVKDCFVIRKNSGTQN Run BLAST on NCBI mRNA from alignment at Sc0000040:1785005..1786047+ Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL87533_cuf0 ID=transcript:BL87533_cuf0|Name=transcript:BL87533_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1043bp|location=Sequence derived from alignment at Sc0000040:1785005..1786047+ (Branchiostoma lanceolatum)
TGTATCATTAATTTTGAAAGAAGATCAGACAAAGATATGTTTCTAAAATT
AACGTCTAAGCTCACTCTAGAAAATGGTGGCTTTTCAGTAGCCAACATAC
ACCGTCCGTTGGATATACCTGAATTTGACATCATTGATCTACGTTTTCAA
AAATTTCTGCTAGGAGTACATTCAAAATCCTCCAACGACGGAGTACGAGA
AGAATTGGGAACTTTCCCCATCATATTATCTGCAAAAAATCAGCTCATAA
AATATTGGCACCGTTTGGTAAACTTACCTGAGGACTCTCTGCTTCACGAA
GCATACAATGTTGTATTTTCTAGTGATCATGACTGGATTAATCATGTGAA
GGATATTCTCAATTATCACGGACTTGGATATATATGGATGAATCCTAAAT
GTTATAAAGTAGACTATATTGAACAACAACTTAAATGCAGACTACAGGAT
GCACATATACAAGAGTGGTTTGGTTGTGTCAGCAATAATTCAAAATTGTC
CCTTCTTCACAAATCCAAAAATCATTATATACAAGAAAAATATCTTCATG
ATGTGAACAATGTTGAAATCCGCAAAGCAATAACACAGTTAAGAATCAGT
AGCCATATATTGAATATAGAAACAGGTAGATACTTTAATGTAGCTCCCGA
CCAAAGGTTTTGCCCATTCTGTCCAAATCGAATAGAGGATGAGTTTCACT
TTATTATGGAATGCACTAAATATGATGCTTTACGCGATGAGTTATTCACC
TCTCTCAATTCAAGTACTTCAGATTTTAAGACGCTCAATGCCACAGATAG
ATTTGACTATATATTTAAATGCAACAGCCCATACAATGTTAAAATAGGCA
AATATGTAAAAGATTGTTTTGTTATTAGAAAAAATAGTGGTACTCAAAAT
TAGCCCAACTTTAATAATGTAAAACATAAGATACTTATTTTGCTGTAGTC
AATAGTTTTATTCCATACTTATGTCTTGTTCTATGTTTACTGTTGTTGCC
ATACTTTGTACCTGCTACAATAGTCGCGCAATAAAGTTCTCTC Coding sequence (CDS) from alignment at Sc0000040:1785005..1786047+ >transcript:BL87533_cuf0 ID=transcript:BL87533_cuf0|Name=transcript:BL87533_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=903bp|location=Sequence derived from alignment at Sc0000040:1785005..1786047+ (Branchiostoma lanceolatum)
TGTATCATTAATTTTGAAAGAAGATCAGACAAAGATATGTTTCTAAAATT
AACGTCTAAGCTCACTCTAGAAAATGGTGGCTTTTCAGTAGCCAACATAC
ACCGTCCGTTGGATATACCTGAATTTGACATCATTGATCTACGTTTTCAA
AAATTTCTGCTAGGAGTACATTCAAAATCCTCCAACGACGGAGTACGAGA
AGAATTGGGAACTTTCCCCATCATATTATCTGCAAAAAATCAGCTCATAA
AATATTGGCACCGTTTGGTAAACTTACCTGAGGACTCTCTGCTTCACGAA
GCATACAATGTTGTATTTTCTAGTGATCATGACTGGATTAATCATGTGAA
GGATATTCTCAATTATCACGGACTTGGATATATATGGATGAATCCTAAAT
GTTATAAAGTAGACTATATTGAACAACAACTTAAATGCAGACTACAGGAT
GCACATATACAAGAGTGGTTTGGTTGTGTCAGCAATAATTCAAAATTGTC
CCTTCTTCACAAATCCAAAAATCATTATATACAAGAAAAATATCTTCATG
ATGTGAACAATGTTGAAATCCGCAAAGCAATAACACAGTTAAGAATCAGT
AGCCATATATTGAATATAGAAACAGGTAGATACTTTAATGTAGCTCCCGA
CCAAAGGTTTTGCCCATTCTGTCCAAATCGAATAGAGGATGAGTTTCACT
TTATTATGGAATGCACTAAATATGATGCTTTACGCGATGAGTTATTCACC
TCTCTCAATTCAAGTACTTCAGATTTTAAGACGCTCAATGCCACAGATAG
ATTTGACTATATATTTAAATGCAACAGCCCATACAATGTTAAAATAGGCA
AATATGTAAAAGATTGTTTTGTTATTAGAAAAAATAGTGGTACTCAAAAT
TAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000040 | genome | Sc0000040:1785005..1786047 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL87533_cuf0 |
| Biotype | protein_coding |
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