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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL88106_cuf0 >transcript:BL88106_cuf0-protein ID=transcript:BL88106_cuf0-protein|Name=transcript:BL88106_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=214bp
MCGERGHRTTQKSALSKHMRTHTGEKPYKCDQCDYSAAQKGDLGRHLAKH
SGEKPYMCGECGYRTARKSQLFAHMRTHTDERSHKCNQCDYSAARKDTLD
SHVAKHTGEKPYMCGECGYRTAHKHVLSRHMRTHTGEKPYKCDQCEYAAA
QKSVLDSHLAKHTGEKPYMCGECGYRTAHKCNLSKHMRHCTKWPRFPAYT
YRDFSVFLSDTDGY Run BLAST on NCBI mRNA from alignment at Sc0000519:2523..3658+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL88106_cuf0 ID=transcript:BL88106_cuf0|Name=transcript:BL88106_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1136bp|location=Sequence derived from alignment at Sc0000519:2523..3658+ (Branchiostoma lanceolatum)
ATGTGTTTTATCTTTTGAATTTTTCCATTAGGTAAGACATGGCAGAGGCT
GGTAATGGGTCTCCTACTGCTGTTCCCCAGAACTTCTGTAATGTGTCTCC
TAGAAGAGTTTTAGGGGACAGAGATACCAGCAATGTTGAAGACCATACGA
TTGAAACCAAAACCAATTTGGACAATCAGCCAGAAGCACATACTAGTGAG
AAACCCTTCATGTGCGGGGAGTGCGGGTACAGGACTATCAGCAAGTCCAA
GTTGTCCAGACATATGAGATCCCATACGGGTGAAAACCCTACATGTGTGG
CGAGCGCGGGCACAGGACAACTCAAAAGTCTGCCTTATCCAAACATATGA
GAACCCATACTGGTGAAAAACCCTACAAGTGTGACCAGTGTGATTATTCT
GCTGCACAGAAAGGTGATTTAGGCCGACATCTAGCAAAACACTCTGGTGA
GAAACCCTACATGTGCGGGGAGTGTGGGTACAGGACAGCTCGCAAGTCTC
AACTATTCGCACATATGAGAACTCATACTGATGAAAGATCCCACAAATGC
AACCAGTGTGATTATTCTGCTGCACGGAAAGACACTTTGGACAGCCATGT
AGCCAAACACACTGGTGAAAAACCCTACATGTGTGGGGAGTGCGGGTACA
GGACAGCTCACAAGCATGTTCTATCAAGACATATGAGAACTCATACTGGT
GAAAAACCCTACAAATGCGACCAGTGTGAATATGCTGCTGCACAGAAATC
TGTCTTGGACAGCCATCTAGCCAAACACACTGGAGAAAAACCCTACATGT
GTGGCGAGTGCGGGTACAGGACAGCTCACAAGTGTAACCTATCCAAACAT
ATGAGACACTGCACGAAATGGCCTCGTTTCCCGGCGTATACGTACCGGGA
TTTTTCTGTATTTTTGTCGGATACTGACGGATACTGACGGATACATGCGG
ATTCGTGTAAGGTATCCGACTATTTCCGCACCGGTATATGGAATATTTCC
TGAAGAATCCGAAAGTAAGGGATTTTCGACGAATACGGAGCCGTACACTG
TACGGAAATGCCACAGATCCTGACGGATGCGTACAGGGATTTTTCTGTAT
TTTGAAGAAAATGGTGAATACTGACGGATACAGGTG Coding sequence (CDS) from alignment at Sc0000519:2523..3658+ >transcript:BL88106_cuf0 ID=transcript:BL88106_cuf0|Name=transcript:BL88106_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=645bp|location=Sequence derived from alignment at Sc0000519:2523..3658+ (Branchiostoma lanceolatum)
ATGTGTGGCGAGCGCGGGCACAGGACAACTCAAAAGTCTGCCTTATCCAA
ACATATGAGAACCCATACTGGTGAAAAACCCTACAAGTGTGACCAGTGTG
ATTATTCTGCTGCACAGAAAGGTGATTTAGGCCGACATCTAGCAAAACAC
TCTGGTGAGAAACCCTACATGTGCGGGGAGTGTGGGTACAGGACAGCTCG
CAAGTCTCAACTATTCGCACATATGAGAACTCATACTGATGAAAGATCCC
ACAAATGCAACCAGTGTGATTATTCTGCTGCACGGAAAGACACTTTGGAC
AGCCATGTAGCCAAACACACTGGTGAAAAACCCTACATGTGTGGGGAGTG
CGGGTACAGGACAGCTCACAAGCATGTTCTATCAAGACATATGAGAACTC
ATACTGGTGAAAAACCCTACAAATGCGACCAGTGTGAATATGCTGCTGCA
CAGAAATCTGTCTTGGACAGCCATCTAGCCAAACACACTGGAGAAAAACC
CTACATGTGTGGCGAGTGCGGGTACAGGACAGCTCACAAGTGTAACCTAT
CCAAACATATGAGACACTGCACGAAATGGCCTCGTTTCCCGGCGTATACG
TACCGGGATTTTTCTGTATTTTTGTCGGATACTGACGGATACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000519 | genome | Sc0000519:2523..3658 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL88106_cuf0 |
| Biotype | protein_coding |
|
