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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL88231_cuf1 >transcript:BL88231_cuf1-protein ID=transcript:BL88231_cuf1-protein|Name=transcript:BL88231_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=99bp
MSYRQQTEEAIRRAVERERHIQVEQIEGGSLLVQVKFLTLAGYWVMRSLN
ERIHRGSDRTCLQLLLEDELQRIGWTGPIQVGMEGWWFAEEEGQEEEEA Run BLAST on NCBI mRNA from alignment at Sc0000024:1909766..1915777- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL88231_cuf1 ID=transcript:BL88231_cuf1|Name=transcript:BL88231_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=6012bp|location=Sequence derived from alignment at Sc0000024:1909766..1915777- (Branchiostoma lanceolatum)
GGAACATGAGTGAAAAGCGGTGACTTTGGACTCTGTGCTTGTAAATTGTT
CTCCTCAAACAAGGGCCTCCATTTAACATCCTATGCTAGCGAGGGATGTC
CCTCACTGAAGCTAGGTACTCATTTGCACCTGAGTGAAAGTGAGGGAAGC
CGAGTAACATACCTTCCCCAAGTGCACAACATTTGTCAACAACCCTAACC
CCAAGATCACTTTTACTTTAAGGTTTCCGAGTCCCCTGCAGTAGTGTTGG
GAGCAGGTCTGACTGCAGGTGTGGCTACAGGAGTCACGACCCTGGTAGCT
TTCTACATGAGCTACAGGCAACAAACTGAGGAGGCCATCCGCAGGGCAGT
GGAGAGAGAGCGGCATATTCAAGTAGAGCAGATAGAGGGAGGGTCGCTTC
TTGTGCAGGTCAAGTTTCTAACGCTGGTAAGACAAGACAAATAATTATAT
GAAACTTTTATCTTTGGAGAAAATAGGAAAAAAGGAAGGCTAAACTTAAA
ATTGAAAAGTCTTCCATACTTTGCTAGATATCCCTCAAAGTCAACTTGAA
TTTAGAAAAAAATCCCCATTCATTTTGCTAGGGTCTTACTATAAGTCTTC
TCTCTTCCCCCAGGCTGGCTACTGGGTGATGCGCAGCTTAAACGAGAGGA
TCGACCGGGGGAGCGACCGCACCTGTCTGCAGCTGCTGCTGGAGGATGAG
CTGCAGAGGATTGGCTGGACCGGACCCATCCAAGTGGGGATGGAGGGGTG
GTGGTTTACTGAGGAGGATGGGGGACAGGAGGAGGAGGCAGCAGGGATGG
AGGAGAAAGAGGAGAGATGGGAGTGGGCAGGGAGGCTGGGGAAACAGGTA
TGCTGACACTGAGCTTTACTTGCGTACTTTCTTAACATATTTACTAACAT
TTTTGGGCTAGCCAATCAGATGGACTACAGTACTAGTAAGTAACTTTGCT
AGGGGTATCCAAATGAGGGTAGAGACATAAAAGCAGATGGGAAAAGGAAA
AGAGTACAGAGTCTGTAGTTCCTGGGGATGTTGGAGACAAGAAGTAGTAA
CAGGCATAAGGCTGTCACTGTCAGTGTGGGTTGGGGAAAAATCAGGGGAA
ATGGTAGGCACCGACATATTTGACTCCCCACCCTCTAGTTAAAGCTCTCC
CTCTCCATCAAGTGTCTGGATGCATGGCATGGGTGTGGCATTGAAATTAT
TTTACTATTTTCAGTCAGTACCACCCAGCATGACTACAGAAGGAGACTCG
GGCCTGCCTGAAGACGTGTCGTCTGTAGCGGCCATGTCCATTGCTGCAGC
TGGAGAGGTGGAAGAGGGGCCGCTCAAGCGGCTCAGAGCCAGGCTACAGA
AACACAAGGACTCTCCAACAGCACAACGTGAGATCAAGGCCTACAGGTCC
TGGGAGGAAGGAGCCAAAATCCTGACAAACAGTGGGTACACAGATCTGGG
GGGAGTGAAGGCCTTGGTACTGGGCTTCATGCAGCGTGACATGGTAACAC
CAAGTTTCACAAGTAAAGTACTGTATGGACAGTCATTGTTGAACCTGAGT
AAAGCCCAACTGAAACAGCTAGTGACCTCCCAACTGCAAGTTGACCCCAC
TGACAGCACCTGTCTGCTGCTGACAGCTCTACAGCTGCCAGAAGGAGACA
GCCGGGTGCAGACCCTGCAGCAGGTGGTTGCTGCCATCCTACAGCACGGA
CCGGGAGACTGGCTATACCAACACCTACACCACATCTACTGCTATCTGGG
TGAGGCCATATGGATGGCAAGCCCTCAGCCAAAGCCAACAATGATGTCAA
AACTTTTCAAGCGGAGTGACCTCCCAACAACAAACCTATCTTATCTAGCC
AAAGCCCTGTCCACCATGGCTAGTTCCCTTATGTACAAACAGGACCATTT
GGAGACAATGTGCTACACAGCCCTGCTGTCTATGAAAGTGTTTGAGACAG
AAGCCATCAGACAGTGGGAGCACTTCCTCAGCCTGGCACCAGAGTGTGAT
GTCAATGTACCGTATACTCACTACCGCCTGGCCACCCTGTACAACCAGCA
GCAGGACAGGCAGAAGGTGATCCACCACTTCACCAGGGGGCAGCAGTGCG
AGACCAACAGGCTACCTGGGTTTAGTGAGGTCTACAGATCCATCAAAGAT
CCTGCTAGAAAGGCACATGAACATTACGTATTTTAATTGATCTTCTCTAC
CCAAATCAGATGCGTATAAGTCCTATAGGCCTTAAAACCTCCCGTCGGAC
TTCCATTTTAACATTTCATAAACTTATCATGCAAATGACTTGCACATTAT
ACATAACCACATTGCATTGTATATTGTACGTGTCAAAGTCCTGTAGGCCA
AACCTTTTTCCTACTTCCATTTTGACATTTTGTAAAATGTATTAGACAAA
TGAGTGGTACATTTACATAATCTATGCATGTTGATGTTCACCTTTAGCCA
ACTTACAAATAACACGGCCGATTTCATTTTCCAGCAAGGAGAAAACTGTC
GCTTAGGACAGTGCTGGCATGATCAACTGTCACTGTATATACTCAAGGAA
TGAATACTTAGTAAACGATTTCACATGGCTTGAAATTTCTAATGAGTATG
TATTCAATGTTCAAAGATCGGTACTGTGTTCAATTGTGTTCAACTGTCAG
TATTTGTGCGTCTTCACCATAACAGGTGCCTCCAATATATCATAACACTG
TGCAATGTATAGTACATACATGTAGCACTTAGACATGGCCAGGCAGGTGG
GCAGAAGACAGAACAAAAATGTTCGGGGTGGTTTTAAGTTCACAGTCAGG
AGGTCATCACAAAAATCTCTGCATTTGCAATATTACAAATCTTAGATAAA
ATAAGAATAAATAAAAGTTTGAAGATCTCATACATCCATGAAATATTTAG
AATTTCTAGAATGTCTTCTTTAATTGTAGTTCATTAATCATGCAAATAAG
GTTTTGATAAACATTGATCACTTTATGTCACAGTGAAGGGGACAATATAG
AAAATATATAACTGCAAAATTTACAGACATACAGACCAAACACAATACCT
CCCCATGAATAAGCAGCCTCTTTCATTGATTATAGACCTTTCATTGCTTA
TACACCTGCCTAATTACAAGCACCTGAACTTTCTGAAGGGTTTCAAGTTA
AACATTAACAACCATGTCCCGCATGTGGGGCAAAGTGCGATCAACAACTT
TGCAGGTTAAGGTACAAACTCGGCCACTGTAGTTCTTGCAGCGCAGCTGA
AGGTTTTGCTTCAAACATAAAGTAGTCTTGCGAGGTATCTGGTGAACCTT
TTCCACAAAATGGCTGACGGGACACCAAGGCAACCAGGAACAGGTGATCA
GGGTCACCTGACGCCACCTGACGCTGAGATGGAGGCACAAGGAGACCTGC
AGCCTGGACAGGTGGGGAGGGGGGCAGTTTTGTCCCACTTATGAGGGAGA
AAGCGTTAAAATAATGCACATGATCAAGTACACGACAAGTGCAACATTAC
CCAGGACAAGTAGAGAGACATTTCATGTACTTATGTCATGTGTATTAAGG
ACAATACATATATATTCCTCCATGCAAAAAAGAAACCGTCAATAAAATAA
CAAGATAAGCAATTTCATCTATGATGTATCATGTAGCTGTGCAGTAGACA
TACAACAAGTCTTCTATCAATGTTGTACAGCCTAGAACCTAAGTGCAGAC
TGTACTACATTAATGTAACTAGTTCACCTTACATCATAGTAAAATCTATA
CCTAAATTGTTGTGAAATAAACTTTGGCTACAGCCTGTGCAGCATGGGGA
CCATCACCATGGACAGACAGGACAACCAGTACCCCAGGTTCTGGAACAAG
GGCTCCAAGTCCCTCAGCAGCCTGCTCCCACACATGGACAGGCAGGCCAA
CCAGCACCTGACTTTCATGGACAAGGCTATCAGGTCCCACTGCAGATACC
ACAGTTTCCTCAGCAGGCTGCTCCCATGATGTACCATCCCGGTCAGCAGG
GCTACGGCGCTCCAACAGGGATACCCCCATACCAGGGCTTTCCTGTGGCT
CCCCAACAGTACAACATCCCACCTGCAGGCCCTGCAGCTGCAAACGTTGG
TCAGCCGCCAGCTCTGCAGATGTCTGTAGGCCAGGTAGGAGGTGTTTTTG
GTGGAGCGACCATCCGGATCCAGAGCCCGGCCCTAGCAGCGGGAGGACTC
GTGGGAGGACTTGTGGCCGGAGCATCTGCTGCAGCTGCATTCGCAGCCAG
CAAGGTTTGTCAGGTTTATTTCGCATGACCTGTGAACTGCCTTTAGACAT
AACACACAAATTTTGTACCTCACACCTGCCCAAGATGACCACCCAGGGGA
CAGGTGAAAAATAGTCGTTTTGAACTTTGTGCAGTCCCAATTCAAGCCAG
TCGCGGCCGTGTTGGACAGGTGGTTGTCATGAGCAGGCCTCTTAAGGCTT
GCGTCTATGGGAAAAATTTTCGGGACCAAGAAAAAGTGATGGTCATGGAC
AGGAGGTCAGCTTGACAAGGTGGTCACTTGGGCAGGTATGACTGTAAGTA
CAAGCTGTATCAGACCAGACTGTGAGTGAGTCCCTTGCAAAAGTGGTTTG
TAGTGCTGGACAGGCCTGGCATTAATAACCCTAACCCAGCATTTTGGGCA
TTGATGCCATCCCAGTCCAGATCCCTGGGCAATTTGGCATCAATGCTGCC
TTAATGTGATGACCATCAATCATCATTTAGTGTGATCTCCTTCCCCTGAC
AAGAGCCAGTCACACCAAATTAACCCCCTGCCCTCAGTCTCCAGTCTTAG
AGTGATGATTTCTTGCTCAATCTAAAGGTGGACCAGAAGTAATAACCGTG
ACAGGAAATGGCATCAATGCAGCACAGTCCACAGCAATTGGAGATGTCTT
CTAACAATGACCAGTGGATACAGGGGTTTATCCAAGGAGGTTTCTTGTGT
CCTATCTAAAGATAGAGTATGACCACTAGATAATTGCCGTGGCAGAAAAC
AGCATCAATGTGGCACTGCTCCAACTAATTGGTTCAAGGCTTTGCTGGGT
TAACAGTACTAGTTTAGGGAGGGAAACTTGGACAGCCAACTGAAGCTAGG
CACTCATTTGCACCTGAGTGAAGTAAGGAAAGCCATGTTAAGTACCTTTC
CCAAGTACACAACATTAGGGCCTGCATGGGATTTGAACCCACCACCTTTA
GACTCAGCAATCCTAACCACAAGACCACCTTGCCCCTATCCAGGTTTCAG
AGTCTGCTGCAGGAGTGGTGGGAGCAGGTCTGGCTGCAGGTGTGGCTACG
GGAGTTACAACATTGGCAGCTTTCTACATGAGCAACAAGCAACAAACTGA
GGAGGCCATCCGCAGGGCAGTGGAGAGAGAGCGACATATCCAAGTGGAGA
ACATAGAGGGAGGGTCCCTTCTAGTGCAAGTCAAGTTTCTAACACTGGTA
AGACACAGCAAATATGAAACTTTTATGTTTGAAGAAAAAAGGAAAATCGT
CATTAAAGGAAGGCTAAACTTAAAATTGAAAAGTCTACAATATTTTTCTA
AATATCCCTCAAAGTCAAGTTCTCACTTGTTTTACCTAAGTCCGGTGTAG
GTCAGGGCTCTGCCACCATTTGTAACTCGCACCGTATTGACGGCTACTCA
CCTGAAGGTTGAATTGATCAACTGCCACAATAGATGACGTCAGGTTCAAG
TATATCCCAACCAGAAGGAATAGGGCTTTTTGATCAGGCTTTCCGGAGGA
TGGATTTCTATTCATTTTGCTAGGGTCAGTTGGTTATCTGGAGATACTGC
TATTACTATTGGTTTCCCTTCTCTCTTCCCCCAGGCTGGCTACTGGGTGA
TGCGCTCCTTAAACGAGAGGATCCACCGGGGGAGCGACCGCACCTGTCTG
CAGCTGCTGCTGGAGGATGAGCTGCAGAGGATCGGCTGGACCGGACCCAT
CCAAGTGGGGATGGAGGGGTGGTGGTTTGCTGAGGAGGAGGGACAAGAAG
AGGAGGAGGCAG Coding sequence (CDS) from alignment at Sc0000024:1909766..1915777- >transcript:BL88231_cuf1 ID=transcript:BL88231_cuf1|Name=transcript:BL88231_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=594bp|location=Sequence derived from alignment at Sc0000024:1909766..1915777- (Branchiostoma lanceolatum)
ATGAGCTACAGGCAACAAACTGAGGAGGCCATCCGCAGGGCAGTGGAGAG
AGAGCGGCATATTCAAGTAGAGCAGATAGAGGGAGGGTCGCTTCTTGTGC
AGGTCAAGTTTCTAACGCTGGCTGGCTACTGGGTGATGCGCTCCTTAAAC
GAGAGGATCCACCGGGGGAGCGACCGCACCTGTCTGCAGCTGCTGCTGGA
GGATGAGCTGCAGAGGATCGGCTGGACCGGACCCATCCAAGTGGGGATGG
AGGGGTGGTGGTTTGCTGAGGAGGAGGGACAAGAAGAGGAGGAGGCAATG
AGCTACAGGCAACAAACTGAGGAGGCCATCCGCAGGGCAGTGGAGAGAGA
GCGGCATATTCAAGTAGAGCAGATAGAGGGAGGGTCGCTTCTTGTGCAGG
TCAAGTTTCTAACGCTGGCTGGCTACTGGGTGATGCGCTCCTTAAACGAG
AGGATCCACCGGGGGAGCGACCGCACCTGTCTGCAGCTGCTGCTGGAGGA
TGAGCTGCAGAGGATCGGCTGGACCGGACCCATCCAAGTGGGGATGGAGG
GGTGGTGGTTTGCTGAGGAGGAGGGACAAGAAGAGGAGGAGGCA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000024 | genome | Sc0000024:1909766..1915777 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL88231_cuf1 |
| Biotype | protein_coding |
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