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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL89904_cuf0 >transcript:BL89904_cuf0-protein ID=transcript:BL89904_cuf0-protein|Name=transcript:BL89904_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=113bp
MCIEKYAPYNRFRPRTSLTFRPLSESLTEGVGAFLAFSLAPDGWRSTQRF
EQWIKLLMVKWSYGVLKARLINRLSFALPWFRLTVVGWSVVGYALLSFTP
SCRWLVAHCCRSR Run BLAST on NCBI mRNA from alignment at Sc0000096:659855..662368+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL89904_cuf0 ID=transcript:BL89904_cuf0|Name=transcript:BL89904_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2514bp|location=Sequence derived from alignment at Sc0000096:659855..662368+ (Branchiostoma lanceolatum)
GGCGAGCCTAATAGTATACTTTACGCCCGTTCTGTAAGAATTCCCAGAAT
TGTACAGGCATGTCTGGAATGTGTTGAGTATTCCCTGGGGAATTTGTTTT
GAAGTTACCTTTCCCCTGTCTCCCTGTGTTAATTTTGAAAGTAGCACATA
TGGTAAACAGTTTCATTTGGCAATTCAATCACAGTATTTGTTTGTCACGT
ATTTGTCTAAAGGTATATGTGTGAAGTAAAGGGATAGTTATGTCTGTTGA
TCTACTAGTATTTTAGCTATATCTTTCGCCAGGGCTTGTTGCAATGATCT
GAACATTTTTAAAGAAGCCTTTTTTACAAGAGCGAATAATACGTTACATT
CTGATAAGATACAACTGGAAATAGAAATATCAAAACTTTATGTTTTAACT
AAGTTGTATTTTGTTTGAAATAAGAACAAACTGATCACAATAATCCTTTG
AATTTTATTACATATGATTTCAAATATTGAATGACTCAGTTGCAAGCCGC
TCATATGTCTTCAGGTTAGGGACTATTTAAATCGCCAACGTTGGAAAAGA
AACAGACAATCACATTGTGTTTTTATCTCTTTTACTTTATTAACATGGTA
AGAGAAAATAAGATAGTTAATAAAGCAATGTTATGGAAGATACATTTCCA
TATTGTACATTAAAGTAAAATATTTGTACAAGTAGCAAATCGTTTACTTG
GCCATTCATGCCACAGAAATTCTGGAACTATAGACTGAATGTCAAGCCTG
ACTAGATTGATCCCCACGATTGTTGGTTAGGTGATACACAGCATTTGAAA
GCTGCTGTTACTGCCGTTCAAGTTCAACTCTTTCTGATGACTGTTGTCTT
TATTGTCATGCAGAGCTGAAAGAAACAATGTAGGATTAGTAACACCTTGA
TACATGTTAACAGGCTCGATCACCTCCTTCCATGACAACCATAATCAACA
TGTAAACATGTATGGATGTCTATCAGTTTTATTTAGATGATTGAAATGTC
ATGCCCTATCATACAATGTACAATCTAATTGATTAAACCAACGCACCACC
CATCCCTCTTCCCCAACTCCAAACCAAACATGGGTTTGGTCTGGTTTTCA
AGTACCTGGTCAAAATAATTGGGCATTCCAAGTTCAGTTTTTAAACCAAC
CATCTCAATTCAGTATGAGTATAATGACTATGTAATATGTGGGCTTGCTA
TGATGCATATGGAAACTGAAACTTAACATGCAAGAACTTTAATTTGGAGG
GGGTAGACAAGGCTTGTACAGGTGTTTTGTATCCCTCTCCATTCATCGTA
ATCGAAAAAAAACAAGGAAAGAAAGAAAAGGAAATGAATGTTACTAACCA
TGTTGTCCAGGCAAACTGTTTGAACAGCCTCCATGTAACTTGTCCTCCTG
ATTGGTCGCCCGGTTTGGCTGCTCCAGCCTTCCTCCATCCTCCTATCCTT
ATTATCTCGTAACTCCTGAAAAAGCAAGCTGATGAATAACTCACAACTTT
GGTTGTACAGAAGTTTCGTACATGACATGCAACTATTTTTTGGAAGTCAG
AACGTGTTAGGGATTAATATTCCTATGATGTTCGGTGGAAAATGGAAGAT
GACATATATCTTATGCTTTCTATGGTTACGTTGTTCAACCCTACACTTGA
AAGCATTTCAGATCCAAAAGCTAAACACGTCCGTAACTGGACATGTAGAA
AATTCATTTTTCTTCTAGAAGTTTCTCATTATACATGGGCATGGTCCTCT
CCACAAATAAATAAACAAAACTCCTGCAACTTTAACTTAAATCGATGCAC
ATTAATGGGTAACTGAACTGTTCGGAAAATCTGTAACTCACCGGTGAGGG
ATATTTGTGTCGGCTGAGCTTAACAGGATATTTGTGACTTTGTAAGTTTC
CAAGAAACATTTCCATGTCGAAAAGATAAGGTACTTATCATCTCTCTTTC
AAACTGTACTTATAAGTTTGCACAAATCAAAATCCGTAAAATCTAAACGA
GCTCATTGTGAGGTATATGGGGGAGGGCAGGGGTGCTACAATTCAAATCA
GTTTTCCATCACGCAGTGTGAAGACATATAGAAGACTTGTCGTTTGTAAC
CACTATGTTGGACAATAGAATTAATGCAGACCACGAAATAACGTAGTGAT
CAAGCATAGAAACGGCAAGTTCTATGTGTATAGAAAAATATGCGCCGTAC
AACAGGTTTAGACCTAGAACTTCACTAACCTTCAGACCGCTATCTGAGTC
TCTGACGGAAGGTGTGGGCGCCTTCCTGGCCTTTTCCTTGGCTCCGGACG
GGTGGAGGTCGACGCAGCGTTTTGAACAATGGATCAAACTTCTGATGGTC
AAATGGTCATATGGCGTCCTAAAAGCGCGATTAATTAATCGACTGTCGTT
TGCCCTGCCCTGGTTCCGCCTTACCGTGGTTGGTTGGTCGGTGGTTGGCT
ACGCCTTACTGTCGTTCACGCCCAGCTGTCGGTGGTTAGTTGCGCACTGC
TGTCGTTCACGCCC Coding sequence (CDS) from alignment at Sc0000096:659855..662368+ >transcript:BL89904_cuf0 ID=transcript:BL89904_cuf0|Name=transcript:BL89904_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=339bp|location=Sequence derived from alignment at Sc0000096:659855..662368+ (Branchiostoma lanceolatum)
ATGTGTATAGAAAAATATGCGCCGTACAACAGGTTTAGACCTAGAACTTC
ACTAACCTTCAGACCGCTATCTGAGTCTCTGACGGAAGGTGTGGGCGCCT
TCCTGGCCTTTTCCTTGGCTCCGGACGGGTGGAGGTCGACGCAGCGTTTT
GAACAATGGATCAAACTTCTGATGGTCAAATGGTCATATGGCGTCCTAAA
AGCGCGATTAATTAATCGACTGTCGTTTGCCCTGCCCTGGTTCCGCCTTA
CCGTGGTTGGTTGGTCGGTGGTTGGCTACGCCTTACTGTCGTTCACGCCC
AGCTGTCGGTGGTTAGTTGCGCACTGCTGTCGTTCACGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000096 | genome | Sc0000096:659855..662368 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL89904_cuf0 |
| Biotype | protein_coding |
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