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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL90207_cuf0 >transcript:BL90207_cuf0-protein ID=transcript:BL90207_cuf0-protein|Name=transcript:BL90207_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=463bp
MATANRAPKQWCLTKKETINSFENWRANQIYVLSLDPSFTPFLADGVTWQ
KRTAGVEHRGYTNDGEAVPEAQRRTAAQKAASLELMLGQVANFCPVISRN
RRQTAAQKAASLELMLGQVANFCPVISRNRIVKASTSLTDIWQAIRLHFG
FQSTGGYFLDIAKICLEPNERPEDLYQRLTAAVEDNLLTTAGGITHHGEL
VTSDEEVSPSLENMVVLLWLQMLHPGLPAKVKQRYGAELRNKTLSSIKPE
ISLSVDTLLAELQDDENVRSLRLEQTRKQSPRAPQGRSRRPKPQSHNRAC
PLCKQAGRSVYDHFLSVCPYLPEQDKKYMVRTRAVEVEDYSDIDPSDDEE
PIASVLRTETSTFVDDQPALMSRVTVRASPHLEVFHNGQPVNILLDSGAE
SSMIRADEAKRLGLRIHPNTSQTPSQADGGRMAGVLGECRTTFYRRKAPL
RFDALVVSDLASP Run BLAST on NCBI mRNA from alignment at Sc0000012:3905736..3907261+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL90207_cuf0 ID=transcript:BL90207_cuf0|Name=transcript:BL90207_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1526bp|location=Sequence derived from alignment at Sc0000012:3905736..3907261+ (Branchiostoma lanceolatum)
TGTGCTCGGTTCGCACTCCGAATGCTGGCTCCCAGAGTTGTCCTTAGCGG
TCCAAATTGACGTGGTGGCATCGGCAGGATTTCGTCTCAACGCTGTCTAC
CCTAAGAAGTTGGAAAACGCCCTTAAACAGCCGGGATGGCAACAGCGAAC
CGGGCACCAAAGCAGTGGTGCTTGACGAAAAAGGAAACAATCAACTCGTT
CGAAAATTGGCGGGCCAACCAAATCTACGTGCTATCTCTGGACCCAAGCT
TCACTCCATTCTTGGCTGACGGCGTCACATGGCAGAAACGTACAGCGGGA
GTCGAGCACCGGGGATACACCAACGATGGAGAAGCCGTACCAGAGGCGCA
ACGGCGAACGGCGGCGCAGAAGGCGGCAAGTTTGGAGCTGATGCTAGGCC
AGGTCGCTAACTTCTGTCCGGTTATCAGCCGAAACCGNCGGCAAACGGCG
GCGCAGAAGGCGGCAAGTTTGGAGCTGATGCTAGGCCAGGTCGCTAACTT
CTGTCCGGTTATCAGCCGAAACCGAATAGTCAAGGCAAGTACTTCCCTTA
CCGATATCTGGCAAGCAATACGGCTCCATTTCGGATTTCAATCGACCGGG
GGGTATTTTCTGGATATTGCCAAGATCTGTTTAGAGCCAAATGAGCGCCC
GGAGGACTTGTATCAGCGCCTCACCGCGGCAGTCGAGGACAACCTGTTAA
CAACGGCGGGCGGCATAACCCACCATGGGGAGCTAGTAACCTCTGACGAG
GAGGTTAGTCCTTCGCTAGAGAACATGGTTGTGTTACTGTGGCTCCAAAT
GTTGCACCCAGGACTTCCTGCCAAAGTCAAACAGCGATATGGTGCTGAGC
TGAGGAATAAGACCCTATCATCGATTAAACCAGAAATATCCCTGTCTGTA
GACACCTTGTTAGCAGAGCTACAGGACGATGAGAATGTAAGATCGCTCCG
TCTTGAACAGACCCGTAAACAATCCCCAAGAGCTCCACAAGGACGTAGCC
GACGCCCCAAACCACAGAGTCACAACAGGGCATGCCCACTTTGCAAGCAA
GCAGGCAGGTCAGTGTATGATCATTTCCTCAGTGTTTGCCCATACTTACC
TGAGCAGGACAAGAAATACATGGTACGAACAAGAGCTGTTGAGGTGGAAG
ACTACAGTGATATTGATCCTTCTGATGATGAAGAGCCTATAGCTAGCGTC
CTTCGTACTGAAACATCAACCTTTGTCGATGACCAGCCCGCTCTCATGTC
AAGGGTCACTGTTCGTGCCTCCCCACATTTGGAAGTCTTCCACAATGGGC
AGCCAGTCAACATTCTACTAGACTCTGGAGCAGAGTCAAGCATGATCAGG
GCAGATGAGGCAAAGCGTCTGGGTCTACGCATACATCCCAACACCTCGCA
AACTCCAAGTCAAGCAGATGGGGGGCGAATGGCCGGTGTCCTGGGTGAGT
GCAGAACCACCTTCTACAGAAGAAAAGCCCCACTTCGGTTTGATGCTCTT
GTGGTCTCAGACTTAGCATCTCCCAT Coding sequence (CDS) from alignment at Sc0000012:3905736..3907261+ >transcript:BL90207_cuf0 ID=transcript:BL90207_cuf0|Name=transcript:BL90207_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1389bp|location=Sequence derived from alignment at Sc0000012:3905736..3907261+ (Branchiostoma lanceolatum)
ATGGCAACAGCGAACCGGGCACCAAAGCAGTGGTGCTTGACGAAAAAGGA
AACAATCAACTCGTTCGAAAATTGGCGGGCCAACCAAATCTACGTGCTAT
CTCTGGACCCAAGCTTCACTCCATTCTTGGCTGACGGCGTCACATGGCAG
AAACGTACAGCGGGAGTCGAGCACCGGGGATACACCAACGATGGAGAAGC
CGTACCAGAGGCGCAACGGCGAACGGCGGCGCAGAAGGCGGCAAGTTTGG
AGCTGATGCTAGGCCAGGTCGCTAACTTCTGTCCGGTTATCAGCCGAAAC
CGNCGGCAAACGGCGGCGCAGAAGGCGGCAAGTTTGGAGCTGATGCTAGG
CCAGGTCGCTAACTTCTGTCCGGTTATCAGCCGAAACCGAATAGTCAAGG
CAAGTACTTCCCTTACCGATATCTGGCAAGCAATACGGCTCCATTTCGGA
TTTCAATCGACCGGGGGGTATTTTCTGGATATTGCCAAGATCTGTTTAGA
GCCAAATGAGCGCCCGGAGGACTTGTATCAGCGCCTCACCGCGGCAGTCG
AGGACAACCTGTTAACAACGGCGGGCGGCATAACCCACCATGGGGAGCTA
GTAACCTCTGACGAGGAGGTTAGTCCTTCGCTAGAGAACATGGTTGTGTT
ACTGTGGCTCCAAATGTTGCACCCAGGACTTCCTGCCAAAGTCAAACAGC
GATATGGTGCTGAGCTGAGGAATAAGACCCTATCATCGATTAAACCAGAA
ATATCCCTGTCTGTAGACACCTTGTTAGCAGAGCTACAGGACGATGAGAA
TGTAAGATCGCTCCGTCTTGAACAGACCCGTAAACAATCCCCAAGAGCTC
CACAAGGACGTAGCCGACGCCCCAAACCACAGAGTCACAACAGGGCATGC
CCACTTTGCAAGCAAGCAGGCAGGTCAGTGTATGATCATTTCCTCAGTGT
TTGCCCATACTTACCTGAGCAGGACAAGAAATACATGGTACGAACAAGAG
CTGTTGAGGTGGAAGACTACAGTGATATTGATCCTTCTGATGATGAAGAG
CCTATAGCTAGCGTCCTTCGTACTGAAACATCAACCTTTGTCGATGACCA
GCCCGCTCTCATGTCAAGGGTCACTGTTCGTGCCTCCCCACATTTGGAAG
TCTTCCACAATGGGCAGCCAGTCAACATTCTACTAGACTCTGGAGCAGAG
TCAAGCATGATCAGGGCAGATGAGGCAAAGCGTCTGGGTCTACGCATACA
TCCCAACACCTCGCAAACTCCAAGTCAAGCAGATGGGGGGCGAATGGCCG
GTGTCCTGGGTGAGTGCAGAACCACCTTCTACAGAAGAAAAGCCCCACTT
CGGTTTGATGCTCTTGTGGTCTCAGACTTAGCATCTCCC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000012 | genome | Sc0000012:3905736..3907261 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL90207_cuf0 |
| Biotype | protein_coding |
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