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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL90239_cuf0 >transcript:BL90239_cuf0-protein ID=transcript:BL90239_cuf0-protein|Name=transcript:BL90239_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=176bp
QLPYKEEAEDMIRNKTFAAQDTPVMDRVKKVSDLQSDVVYKADARHIMSL
GHSQYPWTPDMARVQEAETIKSERLYTRDSKDQKQKFTILPETPEVTLAK
EVAKLQSEKHYKEEYQKERGKGLHLPPDAVDNLRAKEANLLASQIKYTEE
ARKSAEGKKFDAVAETPVFKTAVEAT Run BLAST on NCBI mRNA from alignment at Sc0000000:7635891..7637800- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL90239_cuf0 ID=transcript:BL90239_cuf0|Name=transcript:BL90239_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1910bp|location=Sequence derived from alignment at Sc0000000:7635891..7637800- (Branchiostoma lanceolatum)
CAGCTTCCTTACAAAGAAGAAGCTGAAGACATGATAAGGAACAAGACCTT
CGCAGCGCAGGACACTCCTGTGATGGACAGAGTGAAGAAAGTGTCGGACC
TGCAGAGTGACGTGGTGTACAAGGCCGATGCTAGACACATCATGTCGCTG
GGACACAGCCAGTACCCATGGACCCCCGACATGGCCAGGGTTCAGGAGGC
AGAGACCATCAAGTCTGAGGTAAGATGGAGCTCTGGGAAATTATTTAGTG
CACTGGTTTAGAAGGTAAAATTCTTTGAAACTGAAATTTCAAAAATTTAT
TGAACATACAACCTATATTTGTTAACAGTTAAACCTGCAGCAGTCACCTT
TCTGCATATCTTGTGGCCACTTTTTGCTGGTCAAAATCATTGATAAAGCA
TTAAGAATCCTGTCTAGTGGGTACAGTATCTGTCTAGATTTATACTGTGA
ATTCTTAAAGTCCCTGAAGCTTGAGTTTTTGCTGTGGTGCACAGGTTTGA
CTGTGGCTATAGTGTTGAAAAGTATTAATAATTCTAAAAGATTAATCACT
AGTCAATCTGTATTATATAATTATGTAACATCTTTAATTATTCAGTTCTT
CTTTAAGTCATGAAATGAATCTTTGCCATTCCAGCGCCTGTACACGAGGG
ATTCAAAGGACCAGAAACAGAAGTTCACAATCCTTCCAGAAACTCCTGAG
GTCACCTTAGCAAAGGAAGTCGCTAAACTACAGAGTGAGGTAAGCAGTCT
GCTATATTCTGCTCTCTTAACAAAATCTACTTATAGTTTTTCATACTTCA
AATATATTATCAGATAGGCTTAAAACATGGGTTTTAGCTCCTTGATTAAT
TTGTCTCACATATCATTCTTAGTCAACTCTATAAACTTTGGGCTACAAGG
TAGTAATTAAAAACTCTATATTACCATGAAAGTTCATCTTTGAAACCTTT
TGTATAGTTAAAGTTGGATGCAATGAGACATGCAAAAAGTGTGCTCCAAA
AAACAGTTTCTTGGAATCAGATCTCTTGCTAAATATACAATGCTTGTCGG
CTTGTGTGTGTTATAATTACTGAATGATGTTTTAGCGCTTAGTTAATGCT
GTTAGTATATCCTTCTCCCACCTACAGAAACACTACAAGGAGGAGTACCA
GAAGGAGAGAGGCAAGGGACTCCATCTTCCTCCAGATGCTGTGGATAACC
TGCGAGCAAAGGAAGCCAACCTGCTAGCCAGCCAGGTGGGTTTTAATACT
TACCCACCATTCAACTTGACAAATCAGAACTTCTTATTTCTTCTTCTTCT
TGCCTTTAATGCCCATGGTCTTGATGACGACCATTCTGGCATGTTGGGAA
AGTTGTGTAAAGTGCACAGCAGGATTCGAACCCGGGACCACTTGGTTCCG
AGCTGAACACGCTGCCGTTGCGCCACACGACCCCACTTAATTTATCTCCT
CTGTTATTTTCTAATAATAAAAACTCGTTGAGAGTACTGCAAAAGCTGTT
TTTTTGGAATGCATATTATTTGTCTGCCCTTGTGAACAGCAAATGTATCA
AGAGAGAAAAAGAATCCACCATCAAAATGAACGTATTCAGCAAATATTTT
GGTCTGTCTTCTATATCTGCCAGAAATATTGATGAAGTATGCAATAAAGT
GAACAGAAGACTTACTAGTACCTCTAGCAATCAGTAATATTCAATGAAAC
AAGTTGTTTGAAAATTACAGCAGAAATGTTTTTCTTGCATGATTTGTGGA
AAACTCTGTTACAAGTATTCTGCAAGATACAATGTTTAAGTATTTATTTT
TATCAACAATGCAGATCAAATACACTGAAGAGGCCCGCAAGTCCGCAGAG
GGAAAGAAGTTTGACGCTGTGGCCGAGACACCTGTGTTCAAGACAGCAGT
GGAGGCAACT Coding sequence (CDS) from alignment at Sc0000000:7635891..7637800- >transcript:BL90239_cuf0 ID=transcript:BL90239_cuf0|Name=transcript:BL90239_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2112bp|location=Sequence derived from alignment at Sc0000000:7635891..7637800- (Branchiostoma lanceolatum)
CAGCTTCCTTACAAAGAAGAAGCTGAAGACATGATAAGGAACAAGACCTT
CGCAGCGCAGGACACTCCTGTGATGGACAGAGTGAAGAAAGTGTCGGACC
TGCAGAGTGACGTGGTGTACAAGGCCGATGCTAGACACATCATGTCGCTG
GGACACAGCCAGTACCCATGGACCCCCGACATGGCCAGGGTTCAGGAGGC
AGAGACCATCAAGTCTGAGCGCCTGTACACGAGGGATTCAAAGGACCAGA
AACAGAAGTTCACAATCCTTCCAGAAACTCCTGAGGTCACCTTAGCAAAG
GAAGTCGCTAAACTACAGAGTGAGAAACACTACAAGGAGGAGTACCAGAA
GGAGAGAGGCAAGGGACTCCATCTTCCTCCAGATGCTGTGGATAACCTGC
GAGCAAAGGAAGCCAACCTGCTAGCCAGCCAGATCAAATACACTGAAGAG
GCCCGCAAGTCCGCAGAGGGAAAGAAGTTTGACGCTGTGGCCGAGACACC
TGTGTTCAAGACAGCAGTGGAGGCAACTCAGCTTCCTTACAAAGAAGAAG
CTGAAGACATGATAAGGAACAAGACCTTCGCAGCGCAGGACACTCCTGTG
ATGGACAGAGTGAAGAAAGTGTCGGACCTGCAGAGTGACGTGGTGTACAA
GGCCGATGCTAGACACATCATGTCGCTGGGACACAGCCAGTACCCATGGA
CCCCCGACATGGCCAGGGTTCAGGAGGCAGAGACCATCAAGTCTGAGCGC
CTGTACACGAGGGATTCAAAGGACCAGAAACAGAAGTTCACAATCCTTCC
AGAAACTCCTGAGGTCACCTTAGCAAAGGAAGTCGCTAAACTACAGAGTG
AGAAACACTACAAGGAGGAGTACCAGAAGGAGAGAGGCAAGGGACTCCAT
CTTCCTCCAGATGCTGTGGATAACCTGCGAGCAAAGGAAGCCAACCTGCT
AGCCAGCCAGATCAAATACACTGAAGAGGCCCGCAAGTCCGCAGAGGGAA
AGAAGTTTGACGCTGTGGCCGAGACACCTGTGTTCAAGACAGCAGTGGAG
GCAACTCAGCTTCCTTACAAAGAAGAAGCTGAAGACATGATAAGGAACAA
GACCTTCGCAGCGCAGGACACTCCTGTGATGGACAGAGTGAAGAAAGTGT
CGGACCTGCAGAGTGACGTGGTGTACAAGGCCGATGCTAGACACATCATG
TCGCTGGGACACAGCCAGTACCCATGGACCCCCGACATGGCCAGGGTTCA
GGAGGCAGAGACCATCAAGTCTGAGCGCCTGTACACGAGGGATTCAAAGG
ACCAGAAACAGAAGTTCACAATCCTTCCAGAAACTCCTGAGGTCACCTTA
GCAAAGGAAGTCGCTAAACTACAGAGTGAGAAACACTACAAGGAGGAGTA
CCAGAAGGAGAGAGGCAAGGGACTCCATCTTCCTCCAGATGCTGTGGATA
ACCTGCGAGCAAAGGAAGCCAACCTGCTAGCCAGCCAGATCAAATACACT
GAAGAGGCCCGCAAGTCCGCAGAGGGAAAGAAGTTTGACGCTGTGGCCGA
GACACCTGTGTTCAAGACAGCAGTGGAGGCAACTCAGCTTCCTTACAAAG
AAGAAGCTGAAGACATGATAAGGAACAAGACCTTCGCAGCGCAGGACACT
CCTGTGATGGACAGAGTGAAGAAAGTGTCGGACCTGCAGAGTGACGTGGT
GTACAAGGCCGATGCTAGACACATCATGTCGCTGGGACACAGCCAGTACC
CATGGACCCCCGACATGGCCAGGGTTCAGGAGGCAGAGACCATCAAGTCT
GAGCGCCTGTACACGAGGGATTCAAAGGACCAGAAACAGAAGTTCACAAT
CCTTCCAGAAACTCCTGAGGTCACCTTAGCAAAGGAAGTCGCTAAACTAC
AGAGTGAGAAACACTACAAGGAGGAGTACCAGAAGGAGAGAGGCAAGGGA
CTCCATCTTCCTCCAGATGCTGTGGATAACCTGCGAGCAAAGGAAGCCAA
CCTGCTAGCCAGCCAGATCAAATACACTGAAGAGGCCCGCAAGTCCGCAG
AGGGAAAGAAGTTTGACGCTGTGGCCGAGACACCTGTGTTCAAGACAGCA
GTGGAGGCAACT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:7635891..7637800 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL90239_cuf0 |
| Biotype | protein_coding |
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