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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL90747_cuf0 >transcript:BL90747_cuf0-protein ID=transcript:BL90747_cuf0-protein|Name=transcript:BL90747_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=272bp
MAELTCVPPVQERHAEQTEIETPIKKEKGRIGWQLDGQQNVPHQETYSEG
QETFDYFGATQPTGHSLNETYNSWEQITDTGRQQGEENLVPNDETCGKRA
EMEESSCELSTGEVSTGHPGMEICHHGHPGKESDNRETQTTDMGLQQETC
YGNFPQPDNKSTSQVQGSRGNMGRHSVKQTGEKPYMCGDCGYRTAYKSNL
SKHMRTHTGEKPYKCDQCDYSAAIKRHLDRHLAKHSGEKPYMCGECGYRT
THKSYLSRHMKTHIGEKSLKCD Run BLAST on NCBI mRNA from alignment at Sc0000000:1023907..1026288+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL90747_cuf0 ID=transcript:BL90747_cuf0|Name=transcript:BL90747_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2382bp|location=Sequence derived from alignment at Sc0000000:1023907..1026288+ (Branchiostoma lanceolatum)
GGAACTGTAATGCATAGCATGTATTGCATGTAGCAGCTGCTAGTTGTCAA
TTTGTACTTCAGCTTGCAGAAAAAAGTATGTCCTTGGTTCGGGTCATCAT
TAGATGTTTGGGTCAAAGTAGTGCGGCACGGTCATTGAAAAAATTAGTAG
AGGTTCTTCTGTGCATGTCAGTGAGGTGGCAACTGTTGAACCTGGGAGGA
ATGCATCGGATTTAAGACTATGAGTCGGATTACGATGTTAGATATTTATT
CCGCGTAAAGCTGCGTCTGAATGCTGTGACCGCCTACGATAATCGTCTGC
AGCTCTTGTTTCTAATAGAATGGAATATATATCTCAACTATATTTTCTTA
ACATCATTTGAGAGATGGCGGAGTTAACATGTGTGCCTCCCGTTCAAGAG
CGTCATGCAGAACAGACTGAAATTGAGACGCCCATCAAAAAGGAGAAAGG
ACGCATTGGATGGCAACTGGATGGACAACAGAACGTGCCGCATCAGGAAA
CGTACAGTGAGGGTCAGGAAACCTTCGACTACTTCGGTGCAACCCAACCA
ACCGGACATTCTTTGAACGAGACTTACAACAGTTGGGAGCAGATAACAGA
CACGGGACGGCAACAGGGCGAGGAAAACTTAGTTCCAAACGACGAAACGT
GCGGTAAAAGAGCAGAAATGGAAGAGTCCAGCTGTGAGCTTTCAACTGGA
GAAGTGAGTACTGGACATCCTGGGATGGAGATATGCCATCATGGACATCC
TGGGAAGGAGAGTGACAACAGGGAGACCCAAACAACAGACATGGGTCTGC
AGCAGGAAACGTGTTATGGGAACTTTCCCCAACCTGACAACAAATCAACC
TCACAGGTACAGGGGAGCAGAGGCAACATGGGAAGGCATTCGGTCAAACA
GACTGGTGAGAAACCTTATATGTGCGGAGACTGTGGTTACAGGACAGCTT
ATAAGTCTAATTTATCAAAGCATATGAGAACACATACAGGAGAGAAACCC
TACAAGTGTGACCAGTGTGACTATTCTGCAGCAATTAAAAGACATTTGGA
CAGACATTTGGCAAAACATAGTGGTGAGAAACCCTACATGTGTGGGGAGT
GTGGGTACAGGACAACTCACAAGTCTTACTTATCCCGACATATGAAAACC
CATATAGGAGAAAAATCTCTTAAGTGTGACTAGTTCGACTATTCTGCTGC
ACAGAAAACTGCTTTGGATAAACATCTCGCAAAACGCTCTGGGGACAAAC
CCTTCATGTGTGGGCAGTAAAACGTACAAACTAAGATTAATCTACATGTG
TGACAAATGTACGGCACACACACCTTTGTCTTCCTTAAACGTGAAAAAAT
GGAATTCTGGAAGAAGGGAGACCATGTTAACGTCCTTATATATGTACGTG
GGTCTGATAACTACTTTGTCCGTAAAGAAATCTACATTCAAGACGAATAT
ATCCTGACAGTCTGCTGCCGATGATGGTGGCAAGTGGGTAAAGCCCGTGT
TGAATTGCACGTAATACTGTATGTTTTGCACTTGTAGTTTCAGTACTAGT
AGGCATGAGTGTTGTATTTTTAATTGTGTTGAAATCGACCATTTGTTTGC
TTAATGGTCTGTCTGCTAAATATACTGTAGAAGTGTTTGTGATCATCAAG
GTATCTACGTTTTTTAACATTGGTATGTTTACTTTTCTTAATAGTAAATG
ATTTTTGGGTGATACATTTGAAAGTATAAATCAACATTCACAATGATATG
TATATTGTGTATAGTATATACCATGTAGTTAGAGTTTTGTACAATGTATT
CCCAGTGTTTTGATATATATATATATATAATTCTAACACGATTAAGATAA
CACAAATGGATGTAAGCAAAGCCAATGATTTAATGTGTTTATATTGTCTT
GCTCAAGTGGTGTTATCAATAGATTCGATATTGACTTAAATCGTAGTACA
GTAGNCAATAGATTCGATGTTGACTTATATCGTAGTACAGTAGACGTCTA
AAATTTGGAGGTACGTGTTTGTCACTGATTGAAGAATATTCTAGAAACTG
TGATTATGCGTGACTGACAAATCTCTTCAACGACTTCCTTGCTCGAGCAG
AGCTTCAAACTATCAACGTGAACATTGATTCATATTCTTTCCTTTCTCTA
AGTAACAGACTTGACTACGCACATCAATATAATCCGTTCTGTTTTATTTG
GATATTAATGATAACTTTATTGCACAATAATTGAATATGTTAATAAATAA
TACAATATCAATTATCAATAATACAATGTGAATGAATAATACAATTTTAA
TGAAGTTACGACCCGGATTCTTGACTTTGTCATTGAAACATGGAAAGGGG
GAAGTTGAGTAACTTATGCTACGTAAACCGGG Coding sequence (CDS) from alignment at Sc0000000:1023907..1026288+ >transcript:BL90747_cuf0 ID=transcript:BL90747_cuf0|Name=transcript:BL90747_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=819bp|location=Sequence derived from alignment at Sc0000000:1023907..1026288+ (Branchiostoma lanceolatum)
ATGGCGGAGTTAACATGTGTGCCTCCCGTTCAAGAGCGTCATGCAGAACA
GACTGAAATTGAGACGCCCATCAAAAAGGAGAAAGGACGCATTGGATGGC
AACTGGATGGACAACAGAACGTGCCGCATCAGGAAACGTACAGTGAGGGT
CAGGAAACCTTCGACTACTTCGGTGCAACCCAACCAACCGGACATTCTTT
GAACGAGACTTACAACAGTTGGGAGCAGATAACAGACACGGGACGGCAAC
AGGGCGAGGAAAACTTAGTTCCAAACGACGAAACGTGCGGTAAAAGAGCA
GAAATGGAAGAGTCCAGCTGTGAGCTTTCAACTGGAGAAGTGAGTACTGG
ACATCCTGGGATGGAGATATGCCATCATGGACATCCTGGGAAGGAGAGTG
ACAACAGGGAGACCCAAACAACAGACATGGGTCTGCAGCAGGAAACGTGT
TATGGGAACTTTCCCCAACCTGACAACAAATCAACCTCACAGGTACAGGG
GAGCAGAGGCAACATGGGAAGGCATTCGGTCAAACAGACTGGTGAGAAAC
CTTATATGTGCGGAGACTGTGGTTACAGGACAGCTTATAAGTCTAATTTA
TCAAAGCATATGAGAACACATACAGGAGAGAAACCCTACAAGTGTGACCA
GTGTGACTATTCTGCAGCAATTAAAAGACATTTGGACAGACATTTGGCAA
AACATAGTGGTGAGAAACCCTACATGTGTGGGGAGTGTGGGTACAGGACA
ACTCACAAGTCTTACTTATCCCGACATATGAAAACCCATATAGGAGAAAA
ATCTCTTAAGTGTGACTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:1023907..1026288 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL90747_cuf0 |
| Biotype | protein_coding |
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