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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL90809_cuf1 >transcript:BL90809_cuf1-protein ID=transcript:BL90809_cuf1-protein|Name=transcript:BL90809_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=491bp
GKVLTRIMLLRLIKAVAEEVLPESQCGFRKDRSTTDMIFTIRQVQEKCRE
QHQNLYLVFVDLTKAFDTVNRPLLWEVLRRFGCPDKFLAVMKALHEGAMV
RVLGGGGKSDPFEVGTGVRQGCVIAPVIFNLFIAAVMMAAKQHILPEDCI
SLTYRLDGNLFNLRRLKAHTRVTHEDMLEFQYADDAAIIGSSAAGLQRTL
NSLDDAYTRAGLIINCGKTEAMEQSQPGTEPATFSIKGTALKNVPTFTYL
GSVLNSTCDITDEVHRRIGLASTSFGRLANRVFLNKDLTTKTKVAVYSAI
CLSILLYASETWTLYRRHIRMLEQFHMRCLQRILGLKWWHKVPHTEVRRR
ASIEPIESLILQRQLRWAGHVIRMPRNRLPRHILYGELSAGNRNAGGQQK
RYKDNLKANLKKCNIKPQSLEKLAEQRSRWREACAAGITSFTANFDRQCE
ERRAKRHQPSSHTGDEHTCDTCGRICLSRIGLVSHRRTHRN Run BLAST on NCBI mRNA from alignment at Sc0000002:7562844..7564362+ Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL90809_cuf1 ID=transcript:BL90809_cuf1|Name=transcript:BL90809_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=1519bp|location=Sequence derived from alignment at Sc0000002:7562844..7564362+ (Branchiostoma lanceolatum)
GGTAAAGTGCTCACCAGGATAATGCTCCTCAGACTCATCAAGGCCGTGGC
AGAGGAGGTCCTCCCCGAGAGTCAATGTGGATTTCGTAAGGACCGTAGCA
CCACGGACATGATCTTCACCATCAGACAGGTACAGGAGAAGTGCAGAGAG
CAGCACCAAAATCTCTATCTGGTCTTTGTTGACCTAACTAAGGCATTTGA
CACTGTGAACAGGCCGTTACTGTGGGAGGTGCTTAGGAGATTCGGCTGCC
CTGACAAGTTCCTGGCTGTAATGAAAGCCCTGCACGAAGGAGCCATGGTA
AGGGTGCTGGGTGGAGGAGGGAAATCGGACCCCTTCGAAGTCGGCACAGG
TGTTAGGCAAGGGTGTGTCATTGCTCCCGTCATCTTCAATCTTTTCATCG
CTGCGGTCATGATGGCTGCTAAGCAACACATCCTCCCAGAAGACTGCATC
TCCCTCACATACCGACTGGACGGCAACCTGTTCAACCTGCGCAGGCTGAA
AGCCCACACACGAGTCACACACGAGGATATGCTTGAGTTTCAGTATGCAG
ATGATGCGGCCATCATCGGCTCCTCAGCAGCCGGGCTACAAAGAACCTTA
AACTCACTGGATGACGCCTACACACGAGCTGGGCTTATCATCAACTGCGG
CAAGACTGAAGCCATGGAGCAGAGCCAACCTGGCACTGAGCCTGCCACAT
TCAGTATTAAAGGCACAGCACTAAAGAACGTCCCGACGTTCACTTATCTA
GGTTCCGTGCTTAACTCCACATGCGACATCACTGACGAGGTCCACAGGCG
CATTGGTCTTGCCTCCACATCCTTCGGCAGACTTGCAAACAGAGTCTTCC
TGAACAAAGATCTTACAACAAAGACAAAAGTTGCTGTGTACAGTGCCATA
TGCCTGTCCATCCTCCTATACGCCAGTGAAACATGGACATTATACAGACG
CCACATCCGTATGCTCGAGCAGTTCCACATGAGATGTCTCCAGCGAATCC
TCGGTCTCAAGTGGTGGCACAAGGTACCCCACACCGAGGTTCGACGCAGG
GCAAGCATCGAGCCAATCGAATCTTTGATCCTCCAGAGGCAGCTCAGATG
GGCTGGACACGTGATCCGAATGCCAAGAAACCGCCTGCCCAGACACATCC
TGTACGGAGAGCTCTCCGCCGGTAACCGCAACGCTGGGGGACAGCAAAAG
AGGTATAAGGACAACCTAAAAGCGAATCTCAAAAAATGCAACATCAAGCC
TCAAAGTTTAGAGAAACTTGCTGAGCAGCGGAGCAGATGGCGAGAGGCTT
GCGCGGCAGGAATCACCTCCTTCACGGCCAACTTCGACCGCCAGTGTGAG
GAGCGCAGAGCCAAGCGGCACCAGCCCTCGAGCCACACAGGGGATGAACA
CACATGCGACACATGCGGAAGGATTTGCCTGTCCAGAATAGGCCTGGTCA
GCCACAGAAGGACACACAGGAATTGACGTCATCGTCGGCGACGACGGACA
GCCTTAAGCAAGTAAGTAA Coding sequence (CDS) from alignment at Sc0000002:7562844..7564362+ >transcript:BL90809_cuf1 ID=transcript:BL90809_cuf1|Name=transcript:BL90809_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1476bp|location=Sequence derived from alignment at Sc0000002:7562844..7564362+ (Branchiostoma lanceolatum)
GGTAAAGTGCTCACCAGGATAATGCTCCTCAGACTCATCAAGGCCGTGGC
AGAGGAGGTCCTCCCCGAGAGTCAATGTGGATTTCGTAAGGACCGTAGCA
CCACGGACATGATCTTCACCATCAGACAGGTACAGGAGAAGTGCAGAGAG
CAGCACCAAAATCTCTATCTGGTCTTTGTTGACCTAACTAAGGCATTTGA
CACTGTGAACAGGCCGTTACTGTGGGAGGTGCTTAGGAGATTCGGCTGCC
CTGACAAGTTCCTGGCTGTAATGAAAGCCCTGCACGAAGGAGCCATGGTA
AGGGTGCTGGGTGGAGGAGGGAAATCGGACCCCTTCGAAGTCGGCACAGG
TGTTAGGCAAGGGTGTGTCATTGCTCCCGTCATCTTCAATCTTTTCATCG
CTGCGGTCATGATGGCTGCTAAGCAACACATCCTCCCAGAAGACTGCATC
TCCCTCACATACCGACTGGACGGCAACCTGTTCAACCTGCGCAGGCTGAA
AGCCCACACACGAGTCACACACGAGGATATGCTTGAGTTTCAGTATGCAG
ATGATGCGGCCATCATCGGCTCCTCAGCAGCCGGGCTACAAAGAACCTTA
AACTCACTGGATGACGCCTACACACGAGCTGGGCTTATCATCAACTGCGG
CAAGACTGAAGCCATGGAGCAGAGCCAACCTGGCACTGAGCCTGCCACAT
TCAGTATTAAAGGCACAGCACTAAAGAACGTCCCGACGTTCACTTATCTA
GGTTCCGTGCTTAACTCCACATGCGACATCACTGACGAGGTCCACAGGCG
CATTGGTCTTGCCTCCACATCCTTCGGCAGACTTGCAAACAGAGTCTTCC
TGAACAAAGATCTTACAACAAAGACAAAAGTTGCTGTGTACAGTGCCATA
TGCCTGTCCATCCTCCTATACGCCAGTGAAACATGGACATTATACAGACG
CCACATCCGTATGCTCGAGCAGTTCCACATGAGATGTCTCCAGCGAATCC
TCGGTCTCAAGTGGTGGCACAAGGTACCCCACACCGAGGTTCGACGCAGG
GCAAGCATCGAGCCAATCGAATCTTTGATCCTCCAGAGGCAGCTCAGATG
GGCTGGACACGTGATCCGAATGCCAAGAAACCGCCTGCCCAGACACATCC
TGTACGGAGAGCTCTCCGCCGGTAACCGCAACGCTGGGGGACAGCAAAAG
AGGTATAAGGACAACCTAAAAGCGAATCTCAAAAAATGCAACATCAAGCC
TCAAAGTTTAGAGAAACTTGCTGAGCAGCGGAGCAGATGGCGAGAGGCTT
GCGCGGCAGGAATCACCTCCTTCACGGCCAACTTCGACCGCCAGTGTGAG
GAGCGCAGAGCCAAGCGGCACCAGCCCTCGAGCCACACAGGGGATGAACA
CACATGCGACACATGCGGAAGGATTTGCCTGTCCAGAATAGGCCTGGTCA
GCCACAGAAGGACACACAGGAATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000002 | genome | Sc0000002:7562844..7564362 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL90809_cuf1 |
| Biotype | protein_coding |
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