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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL90926_cuf0 >transcript:BL90926_cuf0-protein ID=transcript:BL90926_cuf0-protein|Name=transcript:BL90926_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=339bp
MTLSDSQYNLQVTASDLGPNPGTDTASVTINFQPASSFPSISVGTDTFNY
PETQSVGTVLTSVQGSSSKPSPADTVTYHIAGGNEGDVFEVNPSGQVRLR
RSLNYEETSSFNLWMEARDSDTPALSRYHRLRIALTDVNDNPPIFSQNPY
VGSVGENEGTLTSVLTVSASDADSGLNGQFEYRLRATGNLDNSFQVNPNT
GQVSTRRFLDREQRDSYTLVVEAVDKGSPTLTGTATVLITVEDKNDNPMQ
FRNLYSTAILEDTPIGSFVIQVSTTDPDIGTNAMAQYKFSLDSQYAEARG
KFNMGRDSGNVTVASTLDREISDHYELLVIAEDSAWEAN Run BLAST on NCBI mRNA from alignment at xfSc0003677:1..1657- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL90926_cuf0 ID=transcript:BL90926_cuf0|Name=transcript:BL90926_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1657bp|location=Sequence derived from alignment at xfSc0003677:1..1657- (Branchiostoma lanceolatum)
GTTTGGCCAGCTATTTCCTGTGTATTGAGAAGGTGTTTGGTGTCTGCCAC
ACTTGAAACAACACATTACTGTCTGTCTGAAACAACTGTGTCATGTTGGC
CTGACAAGTTGACAAGAATGCCTATTCTTTTGTAAGATGGGGAGTCAACT
TGAGACACTGATCAGTTTGAATAAATATGGAATGTCAGAATGAAATTCCT
CCTTTCTGAGCCATTATTTGATAAAACAATAGATCTAAATGACATTGCAA
TGAAAGGAGCACACATCCCTGTACATCTTTTTTTATTCATCTTTACTACT
GTCATAACATACTGCACAATTATGATGATCATGGTTGGTAGCTCTTGAGA
CATTTTGCCTGAATTGAAAAAAAATTGTCACTTTGTAGCATCATTCATAC
TGGCCTGTGTTAACTACATGATACTCACTACTTAACAGGGAGAAGGTCTA
AGGTTTCTTTTAAGAATATATGTACCAGCACTCAATGTGTTTTCATATGT
TTTTCAGGTACGTTTGTGGCTCTCGCCTCTGCCACCGACCCAGATGAAGG
CACCAATGGTGACGTCCGCTACTCACTCTCTGGTAGCGATGCCAACCGCT
TCAGTATCGACCAGGTCACCGGGGTCATCTCCACGGCGATGACCCTTAGC
GACAGCCAGTACAACCTCCAGGTCACCGCCAGCGATCTCGGACCCAACCC
AGGTACCGACACGGCCAGCGTCACCATCAACTTCCAGCCTGCCTCAAGCT
TCCCCTCCATCAGTGTGGGCACCGACACCTTCAACTATCCAGAAACCCAG
TCAGTCGGAACAGTGCTAACTTCAGTACAAGGCAGTTCATCTAAGCCGTC
TCCAGCTGACACCGTCACGTATCACATCGCGGGCGGAAACGAGGGAGACG
TGTTTGAGGTGAACCCCTCTGGGCAAGTACGTCTTCGAAGAAGCCTGAAC
TACGAGGAAACAAGTTCCTTCAATCTCTGGATGGAAGCCAGGGACAGCGA
TACCCCAGCGTTATCCAGGTATCACAGGCTGAGGATAGCCCTCACAGACG
TGAACGACAACCCGCCAATCTTCTCCCAGAATCCGTACGTTGGCTCTGTC
GGAGAGAACGAGGGGACGTTAACGAGCGTACTGACGGTGTCTGCTTCTGA
TGCTGACTCGGGGTTGAACGGACAGTTTGAATACAGACTCAGAGCTACAG
GAAACTTGGACAACTCCTTCCAGGTCAACCCCAACACGGGTCAGGTCAGT
ACGAGACGATTCCTGGACAGGGAGCAACGAGACAGCTACACCCTCGTAGT
AGAGGCAGTGGATAAGGGTTCCCCTACTCTAACTGGCACAGCTACGGTCC
TCATAACTGTTGAGGACAAGAATGACAACCCCATGCAGTTCAGAAACCTG
TACAGCACCGCCATTCTTGAGGATACACCAATAGGTTCATTTGTGATACA
AGTCAGCACCACGGACCCTGACATTGGCACCAATGCCATGGCACAGTACA
AGTTCTCGCTAGACTCACAGTACGCAGAAGCTCGGGGCAAGTTTAACATG
GGACGTGACAGCGGGAATGTCACAGTAGCATCCACCCTGGACCGTGAAAT
CAGCGATCACTACGAGCTCCTTGTCATTGCAGAAGACTCAGCATGGGAAG
CAAACAC Coding sequence (CDS) from alignment at xfSc0003677:1..1657- >transcript:BL90926_cuf0 ID=transcript:BL90926_cuf0|Name=transcript:BL90926_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1017bp|location=Sequence derived from alignment at xfSc0003677:1..1657- (Branchiostoma lanceolatum)
ATGACCCTTAGCGACAGCCAGTACAACCTCCAGGTCACCGCCAGCGATCT
CGGACCCAACCCAGGTACCGACACGGCCAGCGTCACCATCAACTTCCAGC
CTGCCTCAAGCTTCCCCTCCATCAGTGTGGGCACCGACACCTTCAACTAT
CCAGAAACCCAGTCAGTCGGAACAGTGCTAACTTCAGTACAAGGCAGTTC
ATCTAAGCCGTCTCCAGCTGACACCGTCACGTATCACATCGCGGGCGGAA
ACGAGGGAGACGTGTTTGAGGTGAACCCCTCTGGGCAAGTACGTCTTCGA
AGAAGCCTGAACTACGAGGAAACAAGTTCCTTCAATCTCTGGATGGAAGC
CAGGGACAGCGATACCCCAGCGTTATCCAGGTATCACAGGCTGAGGATAG
CCCTCACAGACGTGAACGACAACCCGCCAATCTTCTCCCAGAATCCGTAC
GTTGGCTCTGTCGGAGAGAACGAGGGGACGTTAACGAGCGTACTGACGGT
GTCTGCTTCTGATGCTGACTCGGGGTTGAACGGACAGTTTGAATACAGAC
TCAGAGCTACAGGAAACTTGGACAACTCCTTCCAGGTCAACCCCAACACG
GGTCAGGTCAGTACGAGACGATTCCTGGACAGGGAGCAACGAGACAGCTA
CACCCTCGTAGTAGAGGCAGTGGATAAGGGTTCCCCTACTCTAACTGGCA
CAGCTACGGTCCTCATAACTGTTGAGGACAAGAATGACAACCCCATGCAG
TTCAGAAACCTGTACAGCACCGCCATTCTTGAGGATACACCAATAGGTTC
ATTTGTGATACAAGTCAGCACCACGGACCCTGACATTGGCACCAATGCCA
TGGCACAGTACAAGTTCTCGCTAGACTCACAGTACGCAGAAGCTCGGGGC
AAGTTTAACATGGGACGTGACAGCGGGAATGTCACAGTAGCATCCACCCT
GGACCGTGAAATCAGCGATCACTACGAGCTCCTTGTCATTGCAGAAGACT
CAGCATGGGAAGCAAAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0003677 | genome | xfSc0003677:1..1657 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL90926_cuf0 |
| Biotype | protein_coding |
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