|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95009_evm0 >transcript:BL95009_evm0-protein ID=transcript:BL95009_evm0-protein|Name=transcript:BL95009_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=295bp
MEKDSKTINGVDTEVETKNRFILDEGAEVTTRRAAVSRADLVFVAVHREN
YPDLRADQDALAGKILIDVSNNTKIQKGESNAEYLAKLFPSSTVVKAFNV
VSAWTLSSGLFGGSKEVLVSSDDADARQTVMQLAKDMGFTPVDYGSLMAA
REIEDIPLRLLPSWHLALKMSFGVFFLMVVLGVTSIPSVTNAMNWREFTF
VQAKLGWVVLIFATTHMVIYGAEIFVFPGLFASYTIAGFQITLILPAILI
LLKVVTLLPCISSREDRIRRGWEAKVPGRAEAPNTGYQGDETMLL Run BLAST on NCBI mRNA from alignment at Sc0000000:8113923..8116340- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95009_evm0 ID=transcript:BL95009_evm0|Name=transcript:BL95009_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2418bp|location=Sequence derived from alignment at Sc0000000:8113923..8116340- (Branchiostoma lanceolatum)
ATGGAGAAGGATTCGAAGACGATCAATGGAGTCGACACTGAGGTTGAGAC
GAAGAACAGATTCATCTTGGATGAAGTCCGGGGAGAAAGTTGAAAGTCTT
CCCGACCAACCGTCGCCATCTTGGGGAGCGGGGACTACAGCCGGTCCCTG
GCCGAGAGGCTGGTCAGGTCAGGGTTTCCCGTGGCAGTGGGCAGCAGGGA
CCCCGACCGGAATCGCCGACTCTTCCCGCAGGTAAGAAACGTAAACAAAA
ATCACTCTACAAACTTCGGTCTCTACCAGACGCCTTTGGCTGTTTGAAAG
ATAGAAGAAGTCTACAAAATAGAAGCCAGAGAAGATAGCCAGCTTTAGAG
ATACGCATTTAGGTTGACAAAATGGTAACCATGTTTGGACAGTTTCTTCA
ATTTTTCATGCAAACCATGTCCGAAGTCTTGTAGAAATTAGCTAAGTTTC
GCTAATGACATTATATAGTCCTATATAATGTCCTTGGTTTCCATTGGTTT
CGCCAAGAATAAGACTTATACATGTCCACCTAGAGCAGACATGTGTATTC
AATGTTGGCATGTGCGAGACTTACTGACAGTGTTTTGCTAAGCTTGTGCA
CTCGAAGATTGGCATTTCGATATAAACATTTCGTGTCTTCACTGCAGAGA
GAGTCAGTGACTATCTTTTAGCAGAGCTTTGATCGAATTTGATGTCACAT
GCATATACGTATTGCAAAAGCGTGACACGACAACATTTTGTTGAAGCGTA
GCTAGACAGTAAAGTACTTTGTAGATCAACCCATGACCCTTCACCTTTTC
AGGGTGCAGAGGTGACGACCCGTCGGGCAGCCGTGTCCCGGGCTGACCTA
GTATTCGTGGCCGTCCACCGGGAAAACTACCCCGACCTGCGGGCGGACCA
GGATGCTCTGGCCGGCAAGATTCTCATCGACGTCAGCAACAACACCAAGG
TCCGTTCACAGAAAAAGCTTGGCTAGTAGTCTTTTCCGCCAAATGTATGT
CAAACACCTCGGCTAACATGACCCTCCTATTGCCACGTCACACTCGTCCC
ATGATTCTGCTAAATTAAACTGTCTCTAGGAAGATATATAGGGCCAACTA
TTGGGACTCCGAAATAAGTTCCAAATTGCTCTACAAAAACTATCATGTTA
GCCGCCATCATTGTTTTTCCCCCACATGATCCCATGATGCTCCTCTGGAC
TGTGTAAGTCCACAGTGTTATGCAGCACTGCGTATGTACTATATATAGGA
GTGTATAAGACAACAAGCATCTCTGAATTTTTTTCTATCTCAGATTTTCA
TTTTGTATTTGATTTTGTTTTTCGCAGATACAAAAGGGTGAATCAAATGC
CGAGTATCTTGCCAAGTTGTTTCCTTCCTCCACTGTGGTGAAAGCTTTCA
ACGTCGTGTCGGCATGGACGCTGAGTTCGGGACTGTTCGGTGGATCAAAG
GAGGTCAGAATAAATGTTCAAGTAGCGATACTTAGGCAGTATGTAGGTTT
GCTATTATCAAACCACACGTTACCACAAGCGAATCTATCTCCTTCAAAAA
CAGTAATCTTGAATTTGTCGAGGAATAACAAGAATTGCAGTCTTGATTTT
GTTTTCTCCACACAAAAATCCACATGATGACTAAATAGCTATAGGACATA
GGCTCTTGCTCCTTTGAAAACGTAATTTGCTGCATTGTTAACATCACGTG
TCCAACGTGGTTTGTAACACTTGTACTATAATCTATATAGCACTTTTATC
CTGAACAAAAAGGAAACAACCTACAAGTGAAGACAGAAAAAGAGAATTTT
GAAAGGTATAAAACCCAGAAGGCATGGAACAACAACTTCAGTGAAATACT
GATCATTTTAAAATTTGTTGTTTTTCAGGTCCTTGTCAGCAGTGATGACG
CGGATGCTCGCCAGACCGTCATGCAACTGGCCAAAGACATGGGCTTCACC
CCAGTGGATTATGGGAGCTTGATGGCCGCGCGCGAGATCGAGGATATCCC
CCTCCGCCTCCTTCCATCCTGGCACTTGGCGCTGAAGATGTCGTTTGGAG
TGTTCTTTCTGATGGTTGTCCTCGGTGTCACTTCCATCCCGTCCGTGACC
AACGCCATGAACTGGCGCGAGTTCACCTTCGTGCAGGCCAAGCTTGGTTG
GGTTGTCCTGATCTTTGCTACCACCCACATGGTGATCTACGGCGCTGAGA
TATTCGTCTTCCCGGGACTCTTCGCCTCTTACACCATCGCCGGCTTCCAG
ATCACTTTGATCCTGCCCGCCATCTTGATTCTGTTGAAGGTCGTGACCTT
GCTGCCCTGCATCAGTTCTCGCGAGGACAGGATCAGGCGGGGGTGGGAGG
CAAAGGTACCCGGTCGGGCAGAAGCGCCTAACACTGGTTACCAGGGTGAT
GAGACGATGTTATTGTAA Coding sequence (CDS) from alignment at Sc0000000:8113923..8116340- >transcript:BL95009_evm0 ID=transcript:BL95009_evm0|Name=transcript:BL95009_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=3552bp|location=Sequence derived from alignment at Sc0000000:8113923..8116340- (Branchiostoma lanceolatum)
ATGGAGAAGGATTCGAAGACGATCAATGGAGTCGACACTGAGGTTGAGAC
GAAGAACAGATTCATCTTGGATGAAGGTGCAGAGGTGACGACCCGTCGGG
CAGCCGTGTCCCGGGCTGACCTAGTATTCGTGGCCGTCCACCGGGAAAAC
TACCCCGACCTGCGGGCGGACCAGGATGCTCTGGCCGGCAAGATTCTCAT
CGACGTCAGCAACAACACCAAGATACAAAAGGGTGAATCAAATGCCGAGT
ATCTTGCCAAGTTGTTTCCTTCCTCCACTGTGGTGAAAGCTTTCAACGTC
GTGTCGGCATGGACGCTGAGTTCGGGACTGTTCGGTGGATCAAAGGAGGT
CCTTGTCAGCAGTGATGACGCGGATGCTCGCCAGACCGTCATGCAACTGG
CCAAAGACATGGGCTTCACCCCAGTGGATTATGGGAGCTTGATGGCCGCG
CGCGAGATCGAGGATATCCCCCTCCGCCTCCTTCCATCCTGGCACTTGGC
GCTGAAGATGTCGTTTGGAGTGTTCTTTCTGATGGTTGTCCTCGGTGTCA
CTTCCATCCCGTCCGTGACCAACGCCATGAACTGGCGCGAGTTCACCTTC
GTGCAGGCCAAGCTTGGTTGGGTTGTCCTGATCTTTGCTACCACCCACAT
GGTGATCTACGGCGCTGAGATATTCGTCTTCCCGGGACTCTTCGCCTCTT
ACACCATCGCCGGCTTCCAGATCACTTTGATCCTGCCCGCCATCTTGATT
CTGTTGAAGGTCGTGACCTTGCTGCCCTGCATCAGTTCTCGCGAGGACAG
GATCAGGCGGGGGTGGGAGGCAAAGGTACCCGGTCGGGCAGAAGCGCCTA
ACACTGGTTACCAGGGTGATGAGACGATGTTATTGTAAATGGAGAAGGAT
TCGAAGACGATCAATGGAGTCGACACTGAGGTTGAGACGAAGAACAGATT
CATCTTGGATGAAGGTGCAGAGGTGACGACCCGTCGGGCAGCCGTGTCCC
GGGCTGACCTAGTATTCGTGGCCGTCCACCGGGAAAACTACCCCGACCTG
CGGGCGGACCAGGATGCTCTGGCCGGCAAGATTCTCATCGACGTCAGCAA
CAACACCAAGATACAAAAGGGTGAATCAAATGCCGAGTATCTTGCCAAGT
TGTTTCCTTCCTCCACTGTGGTGAAAGCTTTCAACGTCGTGTCGGCATGG
ACGCTGAGTTCGGGACTGTTCGGTGGATCAAAGGAGGTCCTTGTCAGCAG
TGATGACGCGGATGCTCGCCAGACCGTCATGCAACTGGCCAAAGACATGG
GCTTCACCCCAGTGGATTATGGGAGCTTGATGGCCGCGCGCGAGATCGAG
GATATCCCCCTCCGCCTCCTTCCATCCTGGCACTTGGCGCTGAAGATGTC
GTTTGGAGTGTTCTTTCTGATGGTTGTCCTCGGTGTCACTTCCATCCCGT
CCGTGACCAACGCCATGAACTGGCGCGAGTTCACCTTCGTGCAGGCCAAG
CTTGGTTGGGTTGTCCTGATCTTTGCTACCACCCACATGGTGATCTACGG
CGCTGAGATATTCGTCTTCCCGGGACTCTTCGCCTCTTACACCATCGCCG
GCTTCCAGATCACTTTGATCCTGCCCGCCATCTTGATTCTGTTGAAGGTC
GTGACCTTGCTGCCCTGCATCAGTTCTCGCGAGGACAGGATCAGGCGGGG
GTGGGAGGCAAAGGTACCCGGTCGGGCAGAAGCGCCTAACACTGGTTACC
AGGGTGATGAGACGATGTTATTGTAAATGGAGAAGGATTCGAAGACGATC
AATGGAGTCGACACTGAGGTTGAGACGAAGAACAGATTCATCTTGGATGA
AGGTGCAGAGGTGACGACCCGTCGGGCAGCCGTGTCCCGGGCTGACCTAG
TATTCGTGGCCGTCCACCGGGAAAACTACCCCGACCTGCGGGCGGACCAG
GATGCTCTGGCCGGCAAGATTCTCATCGACGTCAGCAACAACACCAAGAT
ACAAAAGGGTGAATCAAATGCCGAGTATCTTGCCAAGTTGTTTCCTTCCT
CCACTGTGGTGAAAGCTTTCAACGTCGTGTCGGCATGGACGCTGAGTTCG
GGACTGTTCGGTGGATCAAAGGAGGTCCTTGTCAGCAGTGATGACGCGGA
TGCTCGCCAGACCGTCATGCAACTGGCCAAAGACATGGGCTTCACCCCAG
TGGATTATGGGAGCTTGATGGCCGCGCGCGAGATCGAGGATATCCCCCTC
CGCCTCCTTCCATCCTGGCACTTGGCGCTGAAGATGTCGTTTGGAGTGTT
CTTTCTGATGGTTGTCCTCGGTGTCACTTCCATCCCGTCCGTGACCAACG
CCATGAACTGGCGCGAGTTCACCTTCGTGCAGGCCAAGCTTGGTTGGGTT
GTCCTGATCTTTGCTACCACCCACATGGTGATCTACGGCGCTGAGATATT
CGTCTTCCCGGGACTCTTCGCCTCTTACACCATCGCCGGCTTCCAGATCA
CTTTGATCCTGCCCGCCATCTTGATTCTGTTGAAGGTCGTGACCTTGCTG
CCCTGCATCAGTTCTCGCGAGGACAGGATCAGGCGGGGGTGGGAGGCAAA
GGTACCCGGTCGGGCAGAAGCGCCTAACACTGGTTACCAGGGTGATGAGA
CGATGTTATTGTAAATGGAGAAGGATTCGAAGACGATCAATGGAGTCGAC
ACTGAGGTTGAGACGAAGAACAGATTCATCTTGGATGAAGGTGCAGAGGT
GACGACCCGTCGGGCAGCCGTGTCCCGGGCTGACCTAGTATTCGTGGCCG
TCCACCGGGAAAACTACCCCGACCTGCGGGCGGACCAGGATGCTCTGGCC
GGCAAGATTCTCATCGACGTCAGCAACAACACCAAGATACAAAAGGGTGA
ATCAAATGCCGAGTATCTTGCCAAGTTGTTTCCTTCCTCCACTGTGGTGA
AAGCTTTCAACGTCGTGTCGGCATGGACGCTGAGTTCGGGACTGTTCGGT
GGATCAAAGGAGGTCCTTGTCAGCAGTGATGACGCGGATGCTCGCCAGAC
CGTCATGCAACTGGCCAAAGACATGGGCTTCACCCCAGTGGATTATGGGA
GCTTGATGGCCGCGCGCGAGATCGAGGATATCCCCCTCCGCCTCCTTCCA
TCCTGGCACTTGGCGCTGAAGATGTCGTTTGGAGTGTTCTTTCTGATGGT
TGTCCTCGGTGTCACTTCCATCCCGTCCGTGACCAACGCCATGAACTGGC
GCGAGTTCACCTTCGTGCAGGCCAAGCTTGGTTGGGTTGTCCTGATCTTT
GCTACCACCCACATGGTGATCTACGGCGCTGAGATATTCGTCTTCCCGGG
ACTCTTCGCCTCTTACACCATCGCCGGCTTCCAGATCACTTTGATCCTGC
CCGCCATCTTGATTCTGTTGAAGGTCGTGACCTTGCTGCCCTGCATCAGT
TCTCGCGAGGACAGGATCAGGCGGGGGTGGGAGGCAAAGGTACCCGGTCG
GGCAGAAGCGCCTAACACTGGTTACCAGGGTGATGAGACGATGTTATTGT
AA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:8113923..8116340 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95009_evm0 |
| Biotype | protein_coding |
|
