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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95029_evm2 >transcript:BL95029_evm2-protein ID=transcript:BL95029_evm2-protein|Name=transcript:BL95029_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=142bp
MPFPVEKACGTWKRDSYSDNYPQIMEKLGVPADMFQKLQKATFPVGKASL
SGDKFTSKYEYMGKTLESTFTLGVQGEEDDPAVGRKRKVTKTMEGDHLVS
VYPDHDGSGTPMRISRHFVDDDTIHSDIKVGDLEGWMVSKRC Run BLAST on NCBI mRNA from alignment at Sc0000001:7942518..7945177- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95029_evm2 ID=transcript:BL95029_evm2|Name=transcript:BL95029_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=2660bp|location=Sequence derived from alignment at Sc0000001:7942518..7945177- (Branchiostoma lanceolatum)
ATGCCTTTTCCTGTGGAGAAAGCTTGCGGAACATGGAAGCGAGACAGCTA
TTCTGACAACTACCCCCAGATCATGGAGAAACTTGGTACGTGTAAATCTT
TGAACTTGATTCAAGAGTTCAAGAGAGATCAATTCATGGATTGACCATGC
ATGAGTGATAGGCCATCGATCGAGTTTCTGTTGAAACAAATCAACTTGGG
AGTTACGGCAAAGATCAATGAGAAAACTCACACCCTCCCTGTTGAAACCG
CCGTTGGTTTGTTTACACTCAAAAACTCGGTCTACTGGAAGACTTTTACC
GACAATAATGAATTAAACACGATTGATCGTCATTTGTCGTTGGAAAAGGC
ACGTAGTCCCCAAGATTTCGGGAGTGTCACTGCGATTACGACCAACGCCC
CCCCCCCCGGTGATTTCGCTAGCGATAGAGTTCTGTATCTATATCTGTGT
GAGTTCACCCCCTTTCTGGACATCTCGCCACAATTCCGAATCTGTAGAAA
ATCCTTGTTTTTCGGATCCTGTCGAATCTTAGATTCCGGATCACTTGGTC
CTATTTTCGGATATGTTACAGATTCCTTGTCGGATCAGCATTTATCCACC
AAAAATACAGAAAAGTCACTGTAGGTATGTGTCAGGATCTGAGGCCATTT
CGTGCAGTGCCCACCCTCGACAAATAACTAGCGTCACCCCTCACCATATT
CATTAGCCGTAATCTAGGTAGCTGTTTAAAGCGAGCGTAACATGGTTTAT
ATTTCTTATAAACAAAAAAAGTAACATACAAGGCGTGACACACAATGGAC
TTGGCTCCTAAGGCATGTTTTTAGTGTCCAAGTTCAGCAATACGCTCAAA
AAGGGGCAACAACTAGCCTAAAATGTGTTGTAGTGAGTTCAGTAATTTGC
GTTAACAAAACCAGTCGAACCGCAGGTTCAACTATTCAACGCGTTATGGT
CTCGGACCGGAGTTTCTTTCATGGTATCGTACGAAGGCTGACACCCTCAG
GCCAAAGGGCTGAAATTCTGCCACGAAAAGTAGGAACAAATCATTTCGTC
GAAAAGCGGTTTCTTGCTGCTTTCTGGTGTACTTCTCGATATCGTGAGTT
GTCCCTTTATTTTGGGTACAAACTATAATAACATGTTTGATCCGAAAAGT
ATGATTTTTTGACCGAAGGTGTTATAAATCTGGGACATCGGCTTTGATAA
GCTCCAATACCTACGTAAGCTCACAGAATACATTCTATAAATCTTACAAA
CGTATTGTCTATAAGGTAAAGGTAGTGCACAAAGATAAGTTACAAATTAA
CAGAGAAGTGCGTGTAGTCAATAGTTACAATGAGATCTACCCTATACCAG
CTATGGTTTAGCTGATAGCTACGAGCTCGAGCGTCCCAATTGCGGAGTAC
GTGTATCAAGTGTGGTTGGTTGATTGATTGATTGATTGATTGATTGATTG
ATTGATTGGTTACGTATTTGAACTAGAGTTCAACGACCCCAAACATTTGC
CGGTAAATTGTCACGGATTAACCTTTTTCAGAAATAATCAATCCAAATAA
TAGATATCTCCTATTGTATAAAGTATTGTCTTAATTAGTATTTTTTCTTG
GATTTTTCCTCTTAAACTAACACCACTTCAGACATACATATGTTGACATA
TAATATCTTACTTTATAATTAGCACCTGTAAATGTTCAACCAATCCTATC
CAAAACAAAGAAATCCACTGACCATGCGAACTGTTGACCACCTCTCCGAT
CCAGTCAACTGTAATATGTGTTGATGAGTTGTATCCTGGCCTTGTAGGAG
TTCCAGCCGACATGTTTCAAAAGTTACAGAAAGCGACATTCCCCGTCGGC
AAAGCTTCTCTGTCAGGGGACAAGTTCACGTCTAAGTATGAGTACATGGG
GAAAACACTTGAGAGCACCTTCACCTTGGGAGTGCAGGGCGAGGAAGATG
ATCCAGCTGTCGGCAGGAAGAGAAAGGTGAGGTACAGAGAGTAGATAGCA
GTAGGTTTCTGCATCGTAACATGTTATCTATATGATTATAAGCATAACTT
AATTGCTCAACTAGTATACAAGGTAAAACGTTTGACAACTTCTATTACTC
AACAACAATTATAGGATATAACTCTACATTACAGAAGACTATGTAGTATA
GTACAAGACTATATAATTGAACAGTAATTATTATTATTTTGTGAAATTTC
CAACACTTAGGGATTTTTCATGTACTGTTCTATATTTACAATGTTCACGT
TATATACTTAAATTGGGTCTTTTTGTCCATTGAGATTCTGGTACAGAAGA
TGACAGACATGATTACACTTGTTGACATTTGTTATTACTACCCTAACGTT
AACACTGTCCTTCAGGTGACTAAAACGATGGAAGGAGACCATCTGGTGTC
CGTGTACCCTGATCATGACGGGTCGGGAACTCCCATGCGCATCAGCCGCC
ATTTTGTTGATGACGACACCATTCACTCAGTGAGTGTTCTGAAGAGTACA
GAAAGATAGCTTTTCTACAGGTTAAGCTCGGGCAGGGTTTTTACCTTACA
ATTTTTTTTGAAATTTTCAACAATCACATGGCTAACTCAAATCCTTTATT
TCTTTATAGGATATCAAAGTTGGCGACCTCGAGGGCTGGATGGTCTCCAA
GCGCTGCTAG Coding sequence (CDS) from alignment at Sc0000001:7942518..7945177- >transcript:BL95029_evm2 ID=transcript:BL95029_evm2|Name=transcript:BL95029_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=1716bp|location=Sequence derived from alignment at Sc0000001:7942518..7945177- (Branchiostoma lanceolatum)
ATGCCTTTTCCTGTGGAGAAAGCTTGCGGAACATGGAAGCGAGACAGCTA
TTCTGACAACTACCCCCAGATCATGGAGAAACTTGGAGTTCCAGCCGACA
TGTTTCAAAAGTTACAGAAAGCGACATTCCCCGTCGGCAAAGCTTCTCTG
TCAGGGGACAAGTTCACGTCTAAGTATGAGTACATGGGGAAAACACTTGA
GAGCACCTTCACCTTGGGAGTGCAGGGCGAGGAAGATGATCCAGCTGTCG
GCAGGAAGAGAAAGGTGACTAAAACGATGGAAGGAGACCATCTGGTGTCC
GTGTACCCTGATCATGACGGGTCGGGAACTCCCATGCGCATCAGCCGCCA
TTTTGTTGATGACGACACCATTCACTCAGATATCAAAGTTGGCGACCTCG
AGGGCTGGATGGTCTCCAAGCGCTGCTAGATGCCTTTTCCTGTGGAGAAA
GCTTGCGGAACATGGAAGCGAGACAGCTATTCTGACAACTACCCCCAGAT
CATGGAGAAACTTGGAGTTCCAGCCGACATGTTTCAAAAGTTACAGAAAG
CGACATTCCCCGTCGGCAAAGCTTCTCTGTCAGGGGACAAGTTCACGTCT
AAGTATGAGTACATGGGGAAAACACTTGAGAGCACCTTCACCTTGGGAGT
GCAGGGCGAGGAAGATGATCCAGCTGTCGGCAGGAAGAGAAAGGTGACTA
AAACGATGGAAGGAGACCATCTGGTGTCCGTGTACCCTGATCATGACGGG
TCGGGAACTCCCATGCGCATCAGCCGCCATTTTGTTGATGACGACACCAT
TCACTCAGATATCAAAGTTGGCGACCTCGAGGGCTGGATGGTCTCCAAGC
GCTGCTAGATGCCTTTTCCTGTGGAGAAAGCTTGCGGAACATGGAAGCGA
GACAGCTATTCTGACAACTACCCCCAGATCATGGAGAAACTTGGAGTTCC
AGCCGACATGTTTCAAAAGTTACAGAAAGCGACATTCCCCGTCGGCAAAG
CTTCTCTGTCAGGGGACAAGTTCACGTCTAAGTATGAGTACATGGGGAAA
ACACTTGAGAGCACCTTCACCTTGGGAGTGCAGGGCGAGGAAGATGATCC
AGCTGTCGGCAGGAAGAGAAAGGTGACTAAAACGATGGAAGGAGACCATC
TGGTGTCCGTGTACCCTGATCATGACGGGTCGGGAACTCCCATGCGCATC
AGCCGCCATTTTGTTGATGACGACACCATTCACTCAGATATCAAAGTTGG
CGACCTCGAGGGCTGGATGGTCTCCAAGCGCTGCTAGATGCCTTTTCCTG
TGGAGAAAGCTTGCGGAACATGGAAGCGAGACAGCTATTCTGACAACTAC
CCCCAGATCATGGAGAAACTTGGAGTTCCAGCCGACATGTTTCAAAAGTT
ACAGAAAGCGACATTCCCCGTCGGCAAAGCTTCTCTGTCAGGGGACAAGT
TCACGTCTAAGTATGAGTACATGGGGAAAACACTTGAGAGCACCTTCACC
TTGGGAGTGCAGGGCGAGGAAGATGATCCAGCTGTCGGCAGGAAGAGAAA
GGTGACTAAAACGATGGAAGGAGACCATCTGGTGTCCGTGTACCCTGATC
ATGACGGGTCGGGAACTCCCATGCGCATCAGCCGCCATTTTGTTGATGAC
GACACCATTCACTCAGATATCAAAGTTGGCGACCTCGAGGGCTGGATGGT
CTCCAAGCGCTGCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000001 | genome | Sc0000001:7942518..7945177 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95029_evm2 |
| Biotype | protein_coding |
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