transcript:BL95033_evm0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL95033_evm0
Unique Nametranscript:BL95033_evm0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL95033_evm0

>transcript:BL95033_evm0-protein ID=transcript:BL95033_evm0-protein|Name=transcript:BL95033_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=96bp
MPMRVCWVDSTACSGDGCRRCRHNPANNNQTNNNLQTNHNSLRSGCFRPV
EILSHYGTMAAGESAIIELRPGECVLCDCHDYWAQCNDYPCDGIIA
Run BLAST on NCBI

mRNA from alignment at Sc0000001:8701375..8702866-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL95033_evm0 ID=transcript:BL95033_evm0|Name=transcript:BL95033_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=1492bp|location=Sequence derived from alignment at Sc0000001:8701375..8702866- (Branchiostoma lanceolatum)
ATGCCAATGAGGGTGTGTTGGGGTATGTGTTTGTTCAAGTTCCATCGTTG TTCTTTTAGCCCATGCCAAGTGGCAAGTACTACTCGTTAACTTACATTCT GCACACATTCTGTATGCGTGTTCAAGATTAGAGGTGCACTGTCGGTGAAC TATAAAAATCTACTAGATTCTAAATTGAAATATACTACCAGTATTACAAG GAAATATTTCCTCCGTCGACGTCATTTGAAAACTTGTACGAACCTATAAA ACCTTACGAAACACGAGCCTTTAATGTTGGCCATAGGATACGGTTTGGTA TTTCTTGGCCGTAAAAGATCAGAAATGCCATTGAGAAACCCCTATTGTGA CCCTTACGATTTTATTCTCAAAGTGAAACGTGAAGTTGATGATGTATCGC ACGAAGGAGAAACTTAAGATATAGTGTCAAGGAGGTACCAGAAGAAGATA TAGACACGTAACTTTGAGTTCTAATTCAGTATGTTCCAGTTGACAGTACT GCTTGTAGCGGTGACGGTTGCCGCCGCTGCCGACACAACCCGGCCAACAA CAACCAGACCAACAACAACCTTCAGACCAACCACAACTCACTACGTTCCG GTGAGTTCTTCTCGTTGATCTCAGAGCTAGGAAACTTGAGAGGATGGGGA GTAAATGATGTATGTGAAATTCTATTGTTGAATCCACGATTTGTAAGAAA CTCGTTTATGTTAATCAAGATTGGTTATTTCTGGAAGCGTACTTTTATTA CCATATGGACAGACAAATCCACCCGGAAGCAACAGGTATCTTCACGTCAT TCTTGAAATTGGTAACACACTATCAAACTGTATCAAAATAAATACAGCAT ATCTATCAATGCTGCTTTGAAAATTAAAATACCGTCCCGGATAAATACAA GCAGTAGGTAATACAATTTTTAGAGTTATAGTGGTCATACGAATATGTCT TTTCAGAAAATATTCTATTTCATTACATGTCTATACATATGTCATAATCT GTACATATACAGGGTTGTGAGAGCGATTGCTGTACCTGGCCGATACAACA CGAGCTGGGTGAATCTTGGCACGAGCAGTTTGAAGGGTTCTGTCAGGACT GCGTCTGTCTGGCGACTGGGAAGGTTTGCGAGCCCTGTCCACCAAGAGGT ATGTGAGTGTGTGTCAGTGTGTGTGTATACGTGTGTATACGCGCGCGCGC GCGCGTCACGGTGTGTGTCGCGGTGCGCGCGCGTGTGTGTGCGGATTGTC ATACTCCTTACATGATGCACGTACAATCAAGTTTTGATTAATTGATTGAT TGATTGATTGATTGATTTTCTCTCTTTGTTTTAGGCTGCTTCAGACCGGT CGAAATACTTTCGCATTATGGCACGATGGCTGCGGGCGAGTCGGCCATCA TAGAGCTGCGTCCGGGAGAGTGCGTGCTGTGCGACTGCCATGACTACTGG GCTCAGTGCAACGACTACCCTTGCGACGGCATCATAGCTTAA

Coding sequence (CDS) from alignment at Sc0000001:8701375..8702866-

>transcript:BL95033_evm0 ID=transcript:BL95033_evm0|Name=transcript:BL95033_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=873bp|location=Sequence derived from alignment at Sc0000001:8701375..8702866- (Branchiostoma lanceolatum)
ATGCCAATGAGGGTGTGTTGGGTTGACAGTACTGCTTGTAGCGGTGACGG
TTGCCGCCGCTGCCGACACAACCCGGCCAACAACAACCAGACCAACAACA
ACCTTCAGACCAACCACAACTCACTACGTTCCGGCTGCTTCAGACCGGTC
GAAATACTTTCGCATTATGGCACGATGGCTGCGGGCGAGTCGGCCATCAT
AGAGCTGCGTCCGGGAGAGTGCGTGCTGTGCGACTGCCATGACTACTGGG
CTCAGTGCAACGACTACCCTTGCGACGGCATCATAGCTTAAATGCCAATG
AGGGTGTGTTGGGTTGACAGTACTGCTTGTAGCGGTGACGGTTGCCGCCG
CTGCCGACACAACCCGGCCAACAACAACCAGACCAACAACAACCTTCAGA
CCAACCACAACTCACTACGTTCCGGCTGCTTCAGACCGGTCGAAATACTT
TCGCATTATGGCACGATGGCTGCGGGCGAGTCGGCCATCATAGAGCTGCG
TCCGGGAGAGTGCGTGCTGTGCGACTGCCATGACTACTGGGCTCAGTGCA
ACGACTACCCTTGCGACGGCATCATAGCTTAAATGCCAATGAGGGTGTGT
TGGGTTGACAGTACTGCTTGTAGCGGTGACGGTTGCCGCCGCTGCCGACA
CAACCCGGCCAACAACAACCAGACCAACAACAACCTTCAGACCAACCACA
ACTCACTACGTTCCGGCTGCTTCAGACCGGTCGAAATACTTTCGCATTAT
GGCACGATGGCTGCGGGCGAGTCGGCCATCATAGAGCTGCGTCCGGGAGA
GTGCGTGCTGTGCGACTGCCATGACTACTGGGCTCAGTGCAACGACTACC
CTTGCGACGGCATCATAGCTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL95033gene:BL95033Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL95033_evm0-E1BL95033_evm0-E1-1564476830-30304Branchiostoma lanceolatumexon
BL95033_evm0-E2BL95033_evm0-E2-1564476830-30302Branchiostoma lanceolatumexon
BL95033_evm0-E3BL95033_evm0-E3-1564476830-30300Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL95033_evm0transcript:BL95033_evm0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000001genomeSc0000001:8701375..8702866 -
Properties
Property NameValue
Transcript idBL95033_evm0
Biotypeprotein_coding