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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95105_evm0 >transcript:BL95105_evm0-protein ID=transcript:BL95105_evm0-protein|Name=transcript:BL95105_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=428bp
MCSNITKKRRFYSVQVQSYPAINTILLASPLAAHAARGLLKSRPNPADAN
KKEFLPGTTEEELMCPNSTGPETCSQAGDIRVNEQPGLTSMHTVFLREHN
RIARRLSQLNPHWDDDRVFFETRKIVGALTQMNTYGEFLPRVLGPDAMAT
FHLTLAQSGFFSGYDPSVDPTISNVFATAAYRFGHSLIEDAFERLPPDFE
RGSKCPISLAFGFFNPSHIFNNDQGGPDSILRGLTAQPHQDFDRFMVSGL
TKHLFADPPGSDRGLDLAALNIQRGRDHGLPGYNAWRVKCGLRRAARFAH
LAGEIPDPTTRQNLENVYSHVDDIDLFTGGLAEASAPGGVVGPTFACLIG
LQFQNLRKGDRFWFENPGQFTEAQLAEIRKTSLARILCDNTDGTTRMQPD
VFLQPTQPGNERVACSSLPQMDLTQWQE Run BLAST on NCBI mRNA from alignment at Sc0000005:7221127..7223947+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95105_evm0 ID=transcript:BL95105_evm0|Name=transcript:BL95105_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2821bp|location=Sequence derived from alignment at Sc0000005:7221127..7223947+ (Branchiostoma lanceolatum)
ATGTGTAGTAACATCACGAAGAAACGACGATTCTACTCTGTACAGGTTCA
GAGTGAGTTTTAGCGGACACCTGTAGACATTACCCCCACCTCAGGTGTTC
TTACCTGTTTTAGCGGACACCTGTAGACATTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCTTATTCGCATAA
TCTATATTTGCCATACCTACCTGCTATAGATTACATATTTTGCATTTATT
AAAGTCATTTTGTAGAAAACACTGCAATTATAGCTTTTTCATATTCCTAA
TACACATTAAGACCTAATTTGCATGACTTATATAACATTGTGTACATCTC
TGTCTAATAGCTAAGTAACCTGAAAGTTCATGGAAATTCGTTGTTCCTTT
GTCAGGTTATCCTGCCATAAACACCATTCTGCTTGCTTCTCCCCTGGCAG
CACATGCAGCCCGCGGTCTGCTGAAGTCCAGACCGAACCCTGCAGACGCC
AACAAGAAGGAGTTCCTGCCTGGTACCACGGAGGAGGAGCTTATGTGCCC
GAACTCTACCGGGCCCGAGACGTGCTCGCAGGCTGGGGACATCCGTGTGA
ACGAGCAGCCGGGGCTGACCTCCATGCACACCGTCTTCCTGCGGGAACAC
AACCGGATCGCCAGGCGGCTCTCCCAACTCAACCCGCACTGGGACGACGA
TCGCGTGTTCTTCGAGACCAGGAAGATCGTCGGCGCGCTGACGCAGATGA
ACACGTACGGAGAATTTCTTCCCCGCGTTCTCGGACCGGACGCCATGGCC
ACATTCCACCTGACCCTCGCCCAGAGCGGGTTCTTCTCCGGGTACGACCC
GAGCGTGGACCCCACCATCTCCAACGTCTTCGCCACGGCAGCCTACCGCT
TCGGACACAGTCTTATTGAGGATGCGTTCGAACGCCTTCCTCCTGACTTT
GAACGGGGCAGCAAATGCCCGATCAGCCTGGCCTTTGGTTTCTTCAACCC
ATCCCACATCTTCAACAACGACCAAGGCGGCCCGGACTCCATCCTGCGCG
GACTGACAGCCCAGCCCCATCAGGACTTTGACCGGTTCATGGTCTCGGGC
CTGACGAAACACCTGTTTGCTGATCCTCCCGGGTCAGACAGAGGCCTGGA
CCTGGCGGCCCTGAACATCCAGCGGGGGAGAGACCACGGACTGCCCGGCT
ACAACGCCTGGAGGGTGAAGTGCGGGCTGCGCAGAGCGGCGAGGTTTGCC
CATCTAGCGGGGGAGATCCCTGACCCGACTACACGACAGAACCTGGAGAA
TGTGTACAGGTACGGACAAAGATATTCAACTTCGCATGACGAATCATTGG
GCAATAAAAGAAAGACTCCGGTACCATAGCGGGATAGAATTACCAAATGT
TTGGCTGAACCTCAGTCCTTTCTCATGTAGCACCTCTTCTAGTCCGTCAC
CCTCACCCTCACTGTGAGTCAAACTGTGACGTCCCCCGTCACACTTGAAG
CCACTTGGAAGGCTGTCGTGTGCCCGTGCATTGCACATTGTTAGACAGGG
TGGGAGAGCGTGTGTATATATCTGTAGTCGTTTTTTCTCTTGTTTGAGGG
GTGAAGTTGGTGGTTTATTTGACTTATTCTGATGATGTCCAGTCTCCCAC
CACCAGATTAGAAACAGTGAAGCAACATTGCCATATGTTGTCTGTTGGTA
CCTTTAGGTAATATTACATGTGTCCGGTTTCATACAGGCACGTGAACGAC
ATCGACGTGTTCGTGGGGGGTCTTACTGAGGAGTCTTTGAAGTATGTTGA
TATATTGCCTGCTGTTGCGCCTATTATATTTTGGTAATGCAGCGTTTCGT
TTTGTACAGCCACGTGGACGACATCGACCTTTTCACCGGGGGTCTTGCTG
AGGCGTCCGCGCCGGGCGGAGTCGTGGGTCCAACCTTCGCCTGTCTGATC
GGCCTGCAGTTCCAGAACCTCCGGAAGGGGGACCGCTTCTGGTTCGAGAA
CCCCGGCCAGTTCACAGAAGGTTGGTTAAAGCTATGCTAATCTTTCAGAT
CTTTGATGAATGAATTGATTGGAGATAAGCTGAACTGGTGTAAAAGGAAA
GAATACAGTTATATGAATCTTATCACATTTTTTACATATATGTTTAGCCG
AAAATACCTGCTTTTCGACGTCCAATGCCTCATCAGTAACGAGAACCGAG
AGAACATCCCCGACTTGTAGTAGAAGTGTCCCTTTGAGTTTGTAGCTCAG
CACATTTCTTGCGAACCTTTTTTGTCCAGCCCAGCTCGCGGAGAAGACGA
CATCGGGTCATCTCCTGTGTGATAGAGGACAACTCTTCACTGTTACCGCT
TCAGTACTTAACCCTGTTTTTCAATGGTCTCGGTCTCTATTATAGTCCGG
GACCGATTAGAAATGAAACTGTAGTTTGAGGATTGCACATTTCATGTTTC
TATTAGCATTTACGACATTTCAAACGACGGCTATCTTTTCATATTCTCAT
TGCACTATTTTCTCCAGCCCAACTAGCTAAGATCAGGAGGACCAGTCTGG
CTTTGGCTATAGAAGACTATGAAGGCCTTATGTAAGTGGATGTGCCTACG
TCTCAGCGTGACCATATTCATTCCCCGTTCCCCGTTTCCCATTTTCTCCA
GCCCAACTTGCGGAGATCAGGAAGACCAGCCTGGCCCGGATCCTGTGCGA
CAACACGGACGGCACGACCCGCATGCAGCCGGACGTCTTCCTGCAGCCCA
CACAGCCTGGGAACGAGAGGGTGGCGTGCTCGTCTCTGCCCCAGATGGAC
CTGACCCAGTGGCAGGAGTAG Coding sequence (CDS) from alignment at Sc0000005:7221127..7223947+ >transcript:BL95105_evm0 ID=transcript:BL95105_evm0|Name=transcript:BL95105_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=5148bp|location=Sequence derived from alignment at Sc0000005:7221127..7223947+ (Branchiostoma lanceolatum)
ATGTGTAGTAACATCACGAAGAAACGACGATTCTACTCTGTACAGGTTCA
GAGTTATCCTGCCATAAACACCATTCTGCTTGCTTCTCCCCTGGCAGCAC
ATGCAGCCCGCGGTCTGCTGAAGTCCAGACCGAACCCTGCAGACGCCAAC
AAGAAGGAGTTCCTGCCTGGTACCACGGAGGAGGAGCTTATGTGCCCGAA
CTCTACCGGGCCCGAGACGTGCTCGCAGGCTGGGGACATCCGTGTGAACG
AGCAGCCGGGGCTGACCTCCATGCACACCGTCTTCCTGCGGGAACACAAC
CGGATCGCCAGGCGGCTCTCCCAACTCAACCCGCACTGGGACGACGATCG
CGTGTTCTTCGAGACCAGGAAGATCGTCGGCGCGCTGACGCAGATGAACA
CGTACGGAGAATTTCTTCCCCGCGTTCTCGGACCGGACGCCATGGCCACA
TTCCACCTGACCCTCGCCCAGAGCGGGTTCTTCTCCGGGTACGACCCGAG
CGTGGACCCCACCATCTCCAACGTCTTCGCCACGGCAGCCTACCGCTTCG
GACACAGTCTTATTGAGGATGCGTTCGAACGCCTTCCTCCTGACTTTGAA
CGGGGCAGCAAATGCCCGATCAGCCTGGCCTTTGGTTTCTTCAACCCATC
CCACATCTTCAACAACGACCAAGGCGGCCCGGACTCCATCCTGCGCGGAC
TGACAGCCCAGCCCCATCAGGACTTTGACCGGTTCATGGTCTCGGGCCTG
ACGAAACACCTGTTTGCTGATCCTCCCGGGTCAGACAGAGGCCTGGACCT
GGCGGCCCTGAACATCCAGCGGGGGAGAGACCACGGACTGCCCGGCTACA
ACGCCTGGAGGGTGAAGTGCGGGCTGCGCAGAGCGGCGAGGTTTGCCCAT
CTAGCGGGGGAGATCCCTGACCCGACTACACGACAGAACCTGGAGAATGT
GTACAGCCACGTGGACGACATCGACCTTTTCACCGGGGGTCTTGCTGAGG
CGTCCGCGCCGGGCGGAGTCGTGGGTCCAACCTTCGCCTGTCTGATCGGC
CTGCAGTTCCAGAACCTCCGGAAGGGGGACCGCTTCTGGTTCGAGAACCC
CGGCCAGTTCACAGAAGCCCAACTTGCGGAGATCAGGAAGACCAGCCTGG
CCCGGATCCTGTGCGACAACACGGACGGCACGACCCGCATGCAGCCGGAC
GTCTTCCTGCAGCCCACACAGCCTGGGAACGAGAGGGTGGCGTGCTCGTC
TCTGCCCCAGATGGACCTGACCCAGTGGCAGGAGTAGATGTGTAGTAACA
TCACGAAGAAACGACGATTCTACTCTGTACAGGTTCAGAGTTATCCTGCC
ATAAACACCATTCTGCTTGCTTCTCCCCTGGCAGCACATGCAGCCCGCGG
TCTGCTGAAGTCCAGACCGAACCCTGCAGACGCCAACAAGAAGGAGTTCC
TGCCTGGTACCACGGAGGAGGAGCTTATGTGCCCGAACTCTACCGGGCCC
GAGACGTGCTCGCAGGCTGGGGACATCCGTGTGAACGAGCAGCCGGGGCT
GACCTCCATGCACACCGTCTTCCTGCGGGAACACAACCGGATCGCCAGGC
GGCTCTCCCAACTCAACCCGCACTGGGACGACGATCGCGTGTTCTTCGAG
ACCAGGAAGATCGTCGGCGCGCTGACGCAGATGAACACGTACGGAGAATT
TCTTCCCCGCGTTCTCGGACCGGACGCCATGGCCACATTCCACCTGACCC
TCGCCCAGAGCGGGTTCTTCTCCGGGTACGACCCGAGCGTGGACCCCACC
ATCTCCAACGTCTTCGCCACGGCAGCCTACCGCTTCGGACACAGTCTTAT
TGAGGATGCGTTCGAACGCCTTCCTCCTGACTTTGAACGGGGCAGCAAAT
GCCCGATCAGCCTGGCCTTTGGTTTCTTCAACCCATCCCACATCTTCAAC
AACGACCAAGGCGGCCCGGACTCCATCCTGCGCGGACTGACAGCCCAGCC
CCATCAGGACTTTGACCGGTTCATGGTCTCGGGCCTGACGAAACACCTGT
TTGCTGATCCTCCCGGGTCAGACAGAGGCCTGGACCTGGCGGCCCTGAAC
ATCCAGCGGGGGAGAGACCACGGACTGCCCGGCTACAACGCCTGGAGGGT
GAAGTGCGGGCTGCGCAGAGCGGCGAGGTTTGCCCATCTAGCGGGGGAGA
TCCCTGACCCGACTACACGACAGAACCTGGAGAATGTGTACAGCCACGTG
GACGACATCGACCTTTTCACCGGGGGTCTTGCTGAGGCGTCCGCGCCGGG
CGGAGTCGTGGGTCCAACCTTCGCCTGTCTGATCGGCCTGCAGTTCCAGA
ACCTCCGGAAGGGGGACCGCTTCTGGTTCGAGAACCCCGGCCAGTTCACA
GAAGCCCAACTTGCGGAGATCAGGAAGACCAGCCTGGCCCGGATCCTGTG
CGACAACACGGACGGCACGACCCGCATGCAGCCGGACGTCTTCCTGCAGC
CCACACAGCCTGGGAACGAGAGGGTGGCGTGCTCGTCTCTGCCCCAGATG
GACCTGACCCAGTGGCAGGAGTAGATGTGTAGTAACATCACGAAGAAACG
ACGATTCTACTCTGTACAGGTTCAGAGTTATCCTGCCATAAACACCATTC
TGCTTGCTTCTCCCCTGGCAGCACATGCAGCCCGCGGTCTGCTGAAGTCC
AGACCGAACCCTGCAGACGCCAACAAGAAGGAGTTCCTGCCTGGTACCAC
GGAGGAGGAGCTTATGTGCCCGAACTCTACCGGGCCCGAGACGTGCTCGC
AGGCTGGGGACATCCGTGTGAACGAGCAGCCGGGGCTGACCTCCATGCAC
ACCGTCTTCCTGCGGGAACACAACCGGATCGCCAGGCGGCTCTCCCAACT
CAACCCGCACTGGGACGACGATCGCGTGTTCTTCGAGACCAGGAAGATCG
TCGGCGCGCTGACGCAGATGAACACGTACGGAGAATTTCTTCCCCGCGTT
CTCGGACCGGACGCCATGGCCACATTCCACCTGACCCTCGCCCAGAGCGG
GTTCTTCTCCGGGTACGACCCGAGCGTGGACCCCACCATCTCCAACGTCT
TCGCCACGGCAGCCTACCGCTTCGGACACAGTCTTATTGAGGATGCGTTC
GAACGCCTTCCTCCTGACTTTGAACGGGGCAGCAAATGCCCGATCAGCCT
GGCCTTTGGTTTCTTCAACCCATCCCACATCTTCAACAACGACCAAGGCG
GCCCGGACTCCATCCTGCGCGGACTGACAGCCCAGCCCCATCAGGACTTT
GACCGGTTCATGGTCTCGGGCCTGACGAAACACCTGTTTGCTGATCCTCC
CGGGTCAGACAGAGGCCTGGACCTGGCGGCCCTGAACATCCAGCGGGGGA
GAGACCACGGACTGCCCGGCTACAACGCCTGGAGGGTGAAGTGCGGGCTG
CGCAGAGCGGCGAGGTTTGCCCATCTAGCGGGGGAGATCCCTGACCCGAC
TACACGACAGAACCTGGAGAATGTGTACAGCCACGTGGACGACATCGACC
TTTTCACCGGGGGTCTTGCTGAGGCGTCCGCGCCGGGCGGAGTCGTGGGT
CCAACCTTCGCCTGTCTGATCGGCCTGCAGTTCCAGAACCTCCGGAAGGG
GGACCGCTTCTGGTTCGAGAACCCCGGCCAGTTCACAGAAGCCCAACTTG
CGGAGATCAGGAAGACCAGCCTGGCCCGGATCCTGTGCGACAACACGGAC
GGCACGACCCGCATGCAGCCGGACGTCTTCCTGCAGCCCACACAGCCTGG
GAACGAGAGGGTGGCGTGCTCGTCTCTGCCCCAGATGGACCTGACCCAGT
GGCAGGAGTAGATGTGTAGTAACATCACGAAGAAACGACGATTCTACTCT
GTACAGGTTCAGAGTTATCCTGCCATAAACACCATTCTGCTTGCTTCTCC
CCTGGCAGCACATGCAGCCCGCGGTCTGCTGAAGTCCAGACCGAACCCTG
CAGACGCCAACAAGAAGGAGTTCCTGCCTGGTACCACGGAGGAGGAGCTT
ATGTGCCCGAACTCTACCGGGCCCGAGACGTGCTCGCAGGCTGGGGACAT
CCGTGTGAACGAGCAGCCGGGGCTGACCTCCATGCACACCGTCTTCCTGC
GGGAACACAACCGGATCGCCAGGCGGCTCTCCCAACTCAACCCGCACTGG
GACGACGATCGCGTGTTCTTCGAGACCAGGAAGATCGTCGGCGCGCTGAC
GCAGATGAACACGTACGGAGAATTTCTTCCCCGCGTTCTCGGACCGGACG
CCATGGCCACATTCCACCTGACCCTCGCCCAGAGCGGGTTCTTCTCCGGG
TACGACCCGAGCGTGGACCCCACCATCTCCAACGTCTTCGCCACGGCAGC
CTACCGCTTCGGACACAGTCTTATTGAGGATGCGTTCGAACGCCTTCCTC
CTGACTTTGAACGGGGCAGCAAATGCCCGATCAGCCTGGCCTTTGGTTTC
TTCAACCCATCCCACATCTTCAACAACGACCAAGGCGGCCCGGACTCCAT
CCTGCGCGGACTGACAGCCCAGCCCCATCAGGACTTTGACCGGTTCATGG
TCTCGGGCCTGACGAAACACCTGTTTGCTGATCCTCCCGGGTCAGACAGA
GGCCTGGACCTGGCGGCCCTGAACATCCAGCGGGGGAGAGACCACGGACT
GCCCGGCTACAACGCCTGGAGGGTGAAGTGCGGGCTGCGCAGAGCGGCGA
GGTTTGCCCATCTAGCGGGGGAGATCCCTGACCCGACTACACGACAGAAC
CTGGAGAATGTGTACAGCCACGTGGACGACATCGACCTTTTCACCGGGGG
TCTTGCTGAGGCGTCCGCGCCGGGCGGAGTCGTGGGTCCAACCTTCGCCT
GTCTGATCGGCCTGCAGTTCCAGAACCTCCGGAAGGGGGACCGCTTCTGG
TTCGAGAACCCCGGCCAGTTCACAGAAGCCCAACTTGCGGAGATCAGGAA
GACCAGCCTGGCCCGGATCCTGTGCGACAACACGGACGGCACGACCCGCA
TGCAGCCGGACGTCTTCCTGCAGCCCACACAGCCTGGGAACGAGAGGGTG
GCGTGCTCGTCTCTGCCCCAGATGGACCTGACCCAGTGGCAGGAGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000005 | genome | Sc0000005:7221127..7223947 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95105_evm0 |
| Biotype | protein_coding |
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