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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95111_evm1 >transcript:BL95111_evm1-protein ID=transcript:BL95111_evm1-protein|Name=transcript:BL95111_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=283bp
MSSSNFGTYKRAIVRQIPDSIRDNSEALEDREEQGLPIHEPIDLEKARTE
HALYTQTLRDLGLDVTVVPADEATPDCPFVEDTCIVVGNKALLTRPQGAV
RRKEIDTMEKVLTDLGLEVHRIHDEEAQLEGGDVVFTGHEFFVGDSVCSN
LEGHDILADTFPDYPVLSIPLDEPKFHLKGVVCMAAPGVLAIGESEWGDR
AWKRIQKHGEATYEPLWLPDKVFEDHTCDVIYFNGNLVHCKKEEGAESVK
RFADRFPDLNRVELTIGELMKVDAGLTCCSVLL Run BLAST on NCBI mRNA from alignment at Sc0000005:1038080..1041436- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95111_evm1 ID=transcript:BL95111_evm1|Name=transcript:BL95111_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3357bp|location=Sequence derived from alignment at Sc0000005:1038080..1041436- (Branchiostoma lanceolatum)
ATGTCTTCTTCCAACTTCGGAACCTACAAACGAGCCATCGTCCGCCAGAT
TCCCGACTCCATTCGGGACAACTCGGAGGCCCTCGAAGATCGCGAAGAGC
AAGGCCTCCCCATTCATGAGCCGATTGACCTGGAGAAGGCGCGTACTGAG
CACGCGCTGTACACGCAGACCCTGCGGGACCTGGGGCTGGACGTCACCGT
TGTGCCGGCGGACGAAGCTACCCCCGACTGTCCCTTCGTGGAGGACACTT
GTATAGTGGTCGGCAACAAAGCACTGCTGACCCGACCGCAGGGCGCAGTA
CGACGGAAGGAGGTGAGACATTACCTTACCTTATAAAACCTCCTTGCTTA
CGCTTAGTTTTGAAAAAAAATCACATACGGCAAAAAGCATAATTGCCTGT
ATAACGCCTTCTTCTCGAGAACATGAATATACAACAAGAGTGAAACACAA
TGACAAAATACATACACAATTACAGAATGGATAAAAAATGAATGTAAACA
AGACAAGTTGGTGATCTATCAATTACGAGAATCTACCTGTACATGTATAC
TGTGAATAAAGGTGTGGACTATATCGAAGATATTACAGTTACGCTTAGTT
TGCACCTATCATGCATGACAATCTTATCTAACAATAAGCCATCTCACTGT
TCCATGCGCGCATGTTCAGTCGTGGTGCATTGTGGTCTAAGGTATAAGTT
TAAGGTCTTGTGGCATTTGCTCATTATACATATGGAAAGAATTGTCGACG
TATTAGCATGGTTCATNTCATTTTTTTCTTCTAGAATACGTTACAACTCA
AGCTTCGACTTTTTTGGCTGGCTTCCATCAGTGTACCTAGGTCGAAGCCA
ATATTCGAAAAGATGTCTTCTTCCAACTTCGGAACCTACAAACGAGCCAT
CGTCCGCCAGATTCCCGACTCCATTCGGGACAACTCGGAGGCCCTCGAAG
ATCGCGAAGAGCAAGGCATCCCCATTCATGAGCCGATTGACCTGGAGAAG
GCGCGTACTGAGCACGCGCTGTACACGCAGACCCTGCGGGACCTGGGGCT
GGACGTCACCGTTGTGCCGGCGGACGAAGCTACCCCCGACTGTCCCTTCG
TGGAGGACACTTGTATAGTGGTCGGCAACAAAGCACTGCTGACCCGACCG
CAGGGCGCAGTACGACGGAAGGAGGTGAGACATTACCTTACCTTATAAAA
CCTCCTTGCTTACGCTTAGTTTTGAAAAAAAATCACATACGGCAAAAAGC
ATAATTGCCTGTATAACGCCTTCTTCTCGAGAACATGAATATACAACAAG
AGTGAAACACAATGACAAAATACATACACAATTACAGAATGGATAAAAAA
TGAATGTAAACAAGACAAGTTGGTGATCTATCAATTACGAGAATCTACCT
GTACATGTATACTGTGAATAAAGGTGTGGACTATATCGAAGATATTACAG
TTACGCTTAGTTTGCACCTATCATGCATGACAATCTTATCTAACAATAAG
CCATCTCACTGTTCCATGCGCGCATGTTCAGTCGTGGTGCATTGTGGTCT
AAGGTATAAGTTTAAGGTCTTGTGGCATTTGCTCATTATACATATGGAAA
GAATTGTCGACGTATTAGCATGGTTCATGGGACTTGAATATCTCCTATGT
CCAAATCACAAATGCTACAAATTTTATTCATTTATTTTATTGATTTATTC
ATACAGGGAAAATACACTCAGGCAACAAGCCTGTTTTTCAGATATTTTTC
AATATCCTTCTTCAGGAAGCTATCTTAGCACTTTGTCATTTATTATATAT
ATGATATCCAAATTCACATTTTCTATTTTCCTACATGTGTCATTCTCATT
AATATTATGCCAGTTATGTCATTGGTGTTACTATCGAAAGAAGTTACATA
TGTAATGAATATGAAGTTCATTTTATTCAGAACAATTGAAATACAAATAA
ATTTACCTTGATAATTATGCAAATCAAGTCCAAATTTTTATAAAGTTGAT
ATCAAAAGCAAATCCTTATTGGCAAAGGTATAGTAAACCATGTAGATATC
AAGTTTCCTATAAACAAGTCCATGGACTTTACTCTGGTCGTCTCCTTTGG
TGATGTTTTATATTTGTGTATTTTCTCTCTCTTTTAAAGATCGACACCAT
GGAGAAGGTACTGACAGACCTTGGGTTGGAGGTACACAGGATTCATGACG
AAGAGGCACAGTTAGAGGGAGGAGACGTTGTTTTCACTGGTTTGTCATTC
AACTGGTTTCCTTATTGTAGTTTTGTCTAAGGGGACTAAGGAAAAAAAAA
CACATTGGCAACCATTGTAAATTCCTATGTTCTATGCTTACATCTACAAT
TATTACATGTTTTCTTACAAGTTTCGGCTAGCAAAACCTGTATTGTTTCA
TACCGTCGCTACATGGACGTCGCCATATCGACTTAAGACGCCATGATTCC
GCCATATTGACTTATGACGTCATGCGTCGGCCTTTTTTTTTGTTCTTCAG
GACACGAGTTCTTCGTCGGTGATTCTGTGTGCTCCAACCTCGAGGGTCAC
GACATCCTGGCTGACACCTTCCCAGACTACCCCGTGCTCTCTATCCCACT
AGACGAGCCCAAATTCCACCTGAAGGGAGTCGTCTGCATGGCGGCACCAG
GAGTCCTGGCCATAGGAGAGAGCGAGTGGGGGGATCGCGCATGGAAGGTA
ACTTCATGAGATTGTCTCGTCTGAGAAGACATTATTTGTTTGTCTTGTAG
CACAGTAAGGAGGACAGAGGACAGACCGGTATACCGGGGTCGTTGCTTGA
TACTGTACATACAAGGCATCAGACCATTAGCATGCGATCGGTGTCAGATT
CCATTTTCTTAAAAACATTCTGATCTTATTTCAGAGAATTCAGAAACATG
GCGAGGCCACCTATGAACCCCTGTGGCTGCCAGACAAAGTCTTCGAGGAT
CATACCTGTGACGTCATCTATTTCAACGGAAACCTCGTCCACTGCAAGAA
GGAAGAAGGGGCCGAAAGTGTGAAGGTTTGTTGACTTAATTGTTAAAGCT
TTAATTGAAAAAAAAACGTATGTAACTGTAAGTGACCACCGACCAAAAAT
GACCGGCAAGTGGCCCTTATGCAGAGGTGGTCACTAGTACAGGTCGGGAT
TTCAACGTTAATTGATTTGAAAGTCTTATTTAGGGAGTTTTCTCAGTATC
GTCTTTTTAAGTATACTAGCTCAGAATATCTAATGATATTTTTCACCTAT
TGCAGAGGTTTGCGGACAGGTTTCCTGACCTTAACCGTGTGGAGCTGACC
ATTGGCGAGCTGATGAAAGTTGATGCTGGCTTGACCTGCTGCTCCGTCCT
ACTTTAA Coding sequence (CDS) from alignment at Sc0000005:1038080..1041436- >transcript:BL95111_evm1 ID=transcript:BL95111_evm1|Name=transcript:BL95111_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=4260bp|location=Sequence derived from alignment at Sc0000005:1038080..1041436- (Branchiostoma lanceolatum)
ATGTCTTCTTCCAACTTCGGAACCTACAAACGAGCCATCGTCCGCCAGAT
TCCCGACTCCATTCGGGACAACTCGGAGGCCCTCGAAGATCGCGAAGAGC
AAGGCCTCCCCATTCATGAGCCGATTGACCTGGAGAAGGCGCGTACTGAG
CACGCGCTGTACACGCAGACCCTGCGGGACCTGGGGCTGGACGTCACCGT
TGTGCCGGCGGACGAAGCTACCCCCGACTGTCCCTTCGTGGAGGACACTT
GTATAGTGGTCGGCAACAAAGCACTGCTGACCCGACCGCAGGGCGCAGTA
CGACGGAAGGAGATCGACACCATGGAGAAGGTACTGACAGACCTTGGGTT
GGAGGTACACAGGATTCATGACGAAGAGGCACAGTTAGAGGGAGGAGACG
TTGTTTTCACTGGACACGAGTTCTTCGTCGGTGATTCTGTGTGCTCCAAC
CTCGAGGGTCACGACATCCTGGCTGACACCTTCCCAGACTACCCCGTGCT
CTCTATCCCACTAGACGAGCCCAAATTCCACCTGAAGGGAGTCGTCTGCA
TGGCGGCACCAGGAGTCCTGGCCATAGGAGAGAGCGAGTGGGGGGATCGC
GCATGGAAGAGAATTCAGAAACATGGCGAGGCCACCTATGAACCCCTGTG
GCTGCCAGACAAAGTCTTCGAGGATCATACCTGTGACGTCATCTATTTCA
ACGGAAACCTCGTCCACTGCAAGAAGGAAGAAGGGGCCGAAAGTGTGAAG
AGGTTTGCGGACAGGTTTCCTGACCTTAACCGTGTGGAGCTGACCATTGG
CGAGCTGATGAAAGTTGATGCTGGCTTGACCTGCTGCTCCGTCCTACTTT
AAATGTCTTCTTCCAACTTCGGAACCTACAAACGAGCCATCGTCCGCCAG
ATTCCCGACTCCATTCGGGACAACTCGGAGGCCCTCGAAGATCGCGAAGA
GCAAGGCCTCCCCATTCATGAGCCGATTGACCTGGAGAAGGCGCGTACTG
AGCACGCGCTGTACACGCAGACCCTGCGGGACCTGGGGCTGGACGTCACC
GTTGTGCCGGCGGACGAAGCTACCCCCGACTGTCCCTTCGTGGAGGACAC
TTGTATAGTGGTCGGCAACAAAGCACTGCTGACCCGACCGCAGGGCGCAG
TACGACGGAAGGAGATCGACACCATGGAGAAGGTACTGACAGACCTTGGG
TTGGAGGTACACAGGATTCATGACGAAGAGGCACAGTTAGAGGGAGGAGA
CGTTGTTTTCACTGGACACGAGTTCTTCGTCGGTGATTCTGTGTGCTCCA
ACCTCGAGGGTCACGACATCCTGGCTGACACCTTCCCAGACTACCCCGTG
CTCTCTATCCCACTAGACGAGCCCAAATTCCACCTGAAGGGAGTCGTCTG
CATGGCGGCACCAGGAGTCCTGGCCATAGGAGAGAGCGAGTGGGGGGATC
GCGCATGGAAGAGAATTCAGAAACATGGCGAGGCCACCTATGAACCCCTG
TGGCTGCCAGACAAAGTCTTCGAGGATCATACCTGTGACGTCATCTATTT
CAACGGAAACCTCGTCCACTGCAAGAAGGAAGAAGGGGCCGAAAGTGTGA
AGAGGTTTGCGGACAGGTTTCCTGACCTTAACCGTGTGGAGCTGACCATT
GGCGAGCTGATGAAAGTTGATGCTGGCTTGACCTGCTGCTCCGTCCTACT
TTAAATGTCTTCTTCCAACTTCGGAACCTACAAACGAGCCATCGTCCGCC
AGATTCCCGACTCCATTCGGGACAACTCGGAGGCCCTCGAAGATCGCGAA
GAGCAAGGCCTCCCCATTCATGAGCCGATTGACCTGGAGAAGGCGCGTAC
TGAGCACGCGCTGTACACGCAGACCCTGCGGGACCTGGGGCTGGACGTCA
CCGTTGTGCCGGCGGACGAAGCTACCCCCGACTGTCCCTTCGTGGAGGAC
ACTTGTATAGTGGTCGGCAACAAAGCACTGCTGACCCGACCGCAGGGCGC
AGTACGACGGAAGGAGATCGACACCATGGAGAAGGTACTGACAGACCTTG
GGTTGGAGGTACACAGGATTCATGACGAAGAGGCACAGTTAGAGGGAGGA
GACGTTGTTTTCACTGGACACGAGTTCTTCGTCGGTGATTCTGTGTGCTC
CAACCTCGAGGGTCACGACATCCTGGCTGACACCTTCCCAGACTACCCCG
TGCTCTCTATCCCACTAGACGAGCCCAAATTCCACCTGAAGGGAGTCGTC
TGCATGGCGGCACCAGGAGTCCTGGCCATAGGAGAGAGCGAGTGGGGGGA
TCGCGCATGGAAGAGAATTCAGAAACATGGCGAGGCCACCTATGAACCCC
TGTGGCTGCCAGACAAAGTCTTCGAGGATCATACCTGTGACGTCATCTAT
TTCAACGGAAACCTCGTCCACTGCAAGAAGGAAGAAGGGGCCGAAAGTGT
GAAGAGGTTTGCGGACAGGTTTCCTGACCTTAACCGTGTGGAGCTGACCA
TTGGCGAGCTGATGAAAGTTGATGCTGGCTTGACCTGCTGCTCCGTCCTA
CTTTAAATGTCTTCTTCCAACTTCGGAACCTACAAACGAGCCATCGTCCG
CCAGATTCCCGACTCCATTCGGGACAACTCGGAGGCCCTCGAAGATCGCG
AAGAGCAAGGCCTCCCCATTCATGAGCCGATTGACCTGGAGAAGGCGCGT
ACTGAGCACGCGCTGTACACGCAGACCCTGCGGGACCTGGGGCTGGACGT
CACCGTTGTGCCGGCGGACGAAGCTACCCCCGACTGTCCCTTCGTGGAGG
ACACTTGTATAGTGGTCGGCAACAAAGCACTGCTGACCCGACCGCAGGGC
GCAGTACGACGGAAGGAGATCGACACCATGGAGAAGGTACTGACAGACCT
TGGGTTGGAGGTACACAGGATTCATGACGAAGAGGCACAGTTAGAGGGAG
GAGACGTTGTTTTCACTGGACACGAGTTCTTCGTCGGTGATTCTGTGTGC
TCCAACCTCGAGGGTCACGACATCCTGGCTGACACCTTCCCAGACTACCC
CGTGCTCTCTATCCCACTAGACGAGCCCAAATTCCACCTGAAGGGAGTCG
TCTGCATGGCGGCACCAGGAGTCCTGGCCATAGGAGAGAGCGAGTGGGGG
GATCGCGCATGGAAGAGAATTCAGAAACATGGCGAGGCCACCTATGAACC
CCTGTGGCTGCCAGACAAAGTCTTCGAGGATCATACCTGTGACGTCATCT
ATTTCAACGGAAACCTCGTCCACTGCAAGAAGGAAGAAGGGGCCGAAAGT
GTGAAGAGGTTTGCGGACAGGTTTCCTGACCTTAACCGTGTGGAGCTGAC
CATTGGCGAGCTGATGAAAGTTGATGCTGGCTTGACCTGCTGCTCCGTCC
TACTTTAAATGTCTTCTTCCAACTTCGGAACCTACAAACGAGCCATCGTC
CGCCAGATTCCCGACTCCATTCGGGACAACTCGGAGGCCCTCGAAGATCG
CGAAGAGCAAGGCCTCCCCATTCATGAGCCGATTGACCTGGAGAAGGCGC
GTACTGAGCACGCGCTGTACACGCAGACCCTGCGGGACCTGGGGCTGGAC
GTCACCGTTGTGCCGGCGGACGAAGCTACCCCCGACTGTCCCTTCGTGGA
GGACACTTGTATAGTGGTCGGCAACAAAGCACTGCTGACCCGACCGCAGG
GCGCAGTACGACGGAAGGAGATCGACACCATGGAGAAGGTACTGACAGAC
CTTGGGTTGGAGGTACACAGGATTCATGACGAAGAGGCACAGTTAGAGGG
AGGAGACGTTGTTTTCACTGGACACGAGTTCTTCGTCGGTGATTCTGTGT
GCTCCAACCTCGAGGGTCACGACATCCTGGCTGACACCTTCCCAGACTAC
CCCGTGCTCTCTATCCCACTAGACGAGCCCAAATTCCACCTGAAGGGAGT
CGTCTGCATGGCGGCACCAGGAGTCCTGGCCATAGGAGAGAGCGAGTGGG
GGGATCGCGCATGGAAGAGAATTCAGAAACATGGCGAGGCCACCTATGAA
CCCCTGTGGCTGCCAGACAAAGTCTTCGAGGATCATACCTGTGACGTCAT
CTATTTCAACGGAAACCTCGTCCACTGCAAGAAGGAAGAAGGGGCCGAAA
GTGTGAAGAGGTTTGCGGACAGGTTTCCTGACCTTAACCGTGTGGAGCTG
ACCATTGGCGAGCTGATGAAAGTTGATGCTGGCTTGACCTGCTGCTCCGT
CCTACTTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000005 | genome | Sc0000005:1038080..1041436 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95111_evm1 |
| Biotype | protein_coding |
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