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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95277_evm1 >transcript:BL95277_evm1-protein ID=transcript:BL95277_evm1-protein|Name=transcript:BL95277_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=166bp
MFIASVKGDVDMVRLLLRKGASVAKRCGSFAPLHGAASKGKTELVELLVN
HGATLDVRDVFQNTPLMLGIASGNFDSSDEGIKLILAAMKTKLLRCCNPK
CGKPGYRSTGALKLCARYHILEHGYDDFVSVSQSLVAHVKRGASADGTVP
GCTCLPGRGEEKGDSQ Run BLAST on NCBI mRNA from alignment at Sc0000016:4092485..4097498- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95277_evm1 ID=transcript:BL95277_evm1|Name=transcript:BL95277_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=5014bp|location=Sequence derived from alignment at Sc0000016:4092485..4097498- (Branchiostoma lanceolatum)
ATGTTCATCGCCTCCGTCAAGGGGGATGTGGACATGGTGAGACTGCTGCT
CCGCAAGGGGGCGTCTGTGGCGAAAAGATGCGGTTCATTTGCCCCGCTTC
ACGGAGCAGCGTCTAAAGGTAGGTTAATTAAAGGTTTGCGTAGCAAAACC
TTTGTTGGATCCGTTGGCATATGATACGCGCCGTTTTGAGTATCAAGACA
TGGTCACGGAAAAAGTTAATAGGGCAGTCAAAATAGGTCAGATCAAGCAT
ACAAATGTGACTCTGATACCGTGACAAGTTCACCAATCTCCTACAGTGCT
TCAGAGGAATCAGACTTTTGCGAGAAACGAGATTTTTCGAGTCAAACTTG
ACCTATTTTTCGCTGGTTTCGCCATTGTTTCAACCCCAAATACGCACCTT
ATGGGGGTTTCGCGGCACCCGTTATAGGGTTAGGGGACCACTGTCTTATC
CGATATATACAAATATAACTACTTAAAAAGCTGCAAATGTCTTCACATTA
ATTGAGCTCACAAGGGGGCAGCTGTAGATATACGGAGAGTGCTGTAGATA
TATGAAGGAAAAACCTGTAGATTTGGGGAGAAGACTGGAGAATGAAAGAG
ACGCATGGAGAAAGCTGGAAACAGATGGAGAAAGCTGGAGAATGGTGGAC
AAAGCTGTAGAATTTGGGAGAATACTGGAGGATGCATGATAGAGAACCAT
GGAGGGTGCCGCGAAACCTCTATTTGGTGCGTATTTGGGGTTGAAAACTA
TGGCGAAACCATAGAAAATCCGGTGGAAAATTGGTCAGCTTTGACTCGAA
AAATCTCGTTTCTCACAAATGTCTGATTCCTCTGATGCACTGTAGGAGAT
TAGTCAACTCATCACGATAACGGAGACGCGTTTATATGCTTGATCTGACC
TATTTTGAATGCACTATTGATTTTTTCCCCTGACCATGTCTTGATACTCA
AAACGGCGCGTATCACATATGTGGTGGCCGCCATCTTGAATTGTGACAGG
GTCGCCATACCATTTCATCGCGAGGGGTGTTTTTTGGGGTCGCGAGCGTT
CTCTCTATTTTGAAAAAAAATGGGCACATTCAACTCAAATAAAAAGAAAA
ATTCAATACCAATTCATATTTATAAAAAGACCCCGTAATCGCTACACTAA
CATAGCAAACCTGAAGTATATGTAGCATAAATACTTAACTCTAGTTCAAA
ATAAATGCTTGTCCTTAAGGCTAGACAGAAGAAGCCAAACGATATCTTTC
GATAATAAAGATATTCTTGGTAAACGATATCTTTAGATAAAACATTCTAG
TTGATACGACTTTTCATTATTGCGTAATGTTCATGATGATGTAACTAACA
CCTCTTGGATGATGGCCATCTATAAAAAGGGAGGCTGCAGGAAGTCAATT
TTATGTACCACATCATGGCGCTCATTAATTTTCGCCTGGTTTTGAAACAA
ATTACATGTGTTGACATTCCACTTGACTTATGGCATATTACTTTTGACGT
ATGTCACCTTTTCCCCTAGGTGTGTATCGGCCCCGCGCGTAGTATGCCAG
GCATTTGTAAGGCCCGTACGGCTTCGCCGCACGTTACCTCGGAGGGGAAC
ATACGAATAATCACCCCGACCAATCGATCGCATTGAAACTCAGATTCGTA
TCAGCCATGACCCGACAAATCGCTTTCTAACTTGCGTTAAAGACTGAATC
TGACAAAAAGAAATCGCCAGTGAGACGGTGGAAGGTGTCAGCTTCCAAAA
GATGACAGATTGACAATTTTGGCACTTTGGAAGTTTGGAGTTTCTACTAC
TTTTCTCTAAACGTTAAATCGCGGACGCATTCAATCACTTCCAAAGTGCA
AAAATTGTCAATTTACACCTAGGGAAAAAGACGTCGTTGTGGTACGTCCA
GAGAATATTCCCTTAAGCCCCTGTCACACTTGTGCGTATATACAAGCCCG
CATGAGTTGCGTATTAACATGTTTTTGGTCAAGATTGAGTTTTCAGCCCA
AGAAGTCATTTCCTTGATTCGATAAGTAGGCTGTAAAACGGTGGGTCAAC
GCAGAAAACAACTTCTTCCCCGCAAACTTTCCTTAAACCTAGGAAATGTT
TAGCCTCCGTTGCAGACTCTGAAGCGGCCGTCTAGGCGGCTGATGGTTAC
AGGATGGCTGATAGTTACGAGGTGGCTGCAAAAAGTGTATTATTTAGCCC
CCCAAAAAGCCGCTTCAGAGTCTGCAACGGAGGCTAGGAAATGTTAATGC
GCAACTCATGCGCACTTGAATATACGCACAAGTGTGACAGGGCCCTCACA
TATGTATTCATTGTGTCGCAAATCCCACATAGGTAAAACAGAGCTGGTAG
AGCTGCTGGTGAACCACGGTGCGACATTAGACGTGCGGGACGTCTTCCAG
AACACGCCGCTCATGTATGCCTGTGGCTTCGAACATGTGGACACAGTTCG
GCGACTGATTGAGCTTGGAGCAAGACCTGATTTAATTGACGGTTTTATAG
GCAAGAGGCAAGTACCACATCAATTCATTCACAAGTTTCACACCATATTG
GTCTCAACTTTCCCCAGCACCTTGCATTTTTTATTTACCTATGCGAAATA
AAGAATACAAAGAATACAAACTCAATTCATTCACAATCATTAGTTCTGCA
GAGAAGCAAATGTATTATCCCCAAAGTGTGATAGAGGGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNGAGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGCGTGTGTGTGTGTGTGGATGTACGTATGCGTACATTCTGAATGGT
GTATACTGTTTGAATCCACATTCGAAAACCCTGATGTCGTAGAAAAGACA
TGAAATCATGTTTTGCTTGAAACATTATACATCGTGGCCTAGATGAACCT
CAGTTCCCTAAATGAGTTGCATCTTTCGCTAGGTTAGGGATAGCATCCGG
AAACTTTGACAGCAGTGACGAGGGTATAAAGCTGATACTAGCAGCGATGA
AGACCAAGTTGCTGAGATGCTGCAACCCGAAGTGTGGCAAACCAGGCTAC
AGGTAGGTCTTGCTGATGATGGTTCCGTTAAAATATTATATGTTCACATT
GTCATCTTATGACTTATATGAGCAAATTAGCCTGGGTACCTTTCTCCATG
ATCAATATATCACAACCGGCCCAATGTTGATTACCGTGGTAATTTTAAGC
GAAAGTGAGCGAGCTGTGACTACGGAGGATGGTACCCAGGCTACATGTAT
ATGGAAAGGTAGTTTCAATTTGAATTTCTACAACTACAAGTCTTCGAAGT
CTACAAAAGGCTGTTGGAACACTACAGAAACCAGGGCAAGCTGCTAGGGG
GCCCAAACCTACACCACTTCAATATTACATCACAAGCTATCTGTCACCCA
AAAATCAAGACCATAGCACGTCCAAGTCAAAAGATACAAAAATAGAAGTT
CTGCTGCAGTACCAAGGTCACATACCAGGGGGCCCAAAATCAAACTTGAA
CTTTGGCTTTACAACACCAGCCCATATACCAAATATCATTGTAATCCATC
AAGAGGTTCCGGAGTTATGCTGACTACAGTAGTGCGGAAACACACACAGA
CACACAGACACACCAAAAACTAAAAAAAATTCATGGAGATAACTAGACAG
TTCTTGAATATATACTAGTAACGTGTGTACCTGTTACATCTTCTACAGGT
CAACCGGTGCCCTGAAGCTGTGTGCGCGGTGTAAGATGACGCGTTACTGC
TGTCGCGACTGTCAAAAACAACACTGGTCTGTCGGACACAAGAAGTGCTG
TGGGCATGACGCGTGGGTTGTCGATCAAACTGACCCCTACCAATTAATGA
TGTTGTTGATGTCAGATCACATCCTAGAACATGGATACGACGATTTTGTA
TCTGTTAGTCAGTCACTCGTAGCCCATGTGAAGCGTGGCGCCTCGGCAGA
TGGTACTGTCCCTGGCTGTACATGTCTCCCAGGCCGTGGTGAGGAAAAGG
GCGACAGCCAGTAG Coding sequence (CDS) from alignment at Sc0000016:4092485..4097498- >transcript:BL95277_evm1 ID=transcript:BL95277_evm1|Name=transcript:BL95277_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=2505bp|location=Sequence derived from alignment at Sc0000016:4092485..4097498- (Branchiostoma lanceolatum)
ATGTTCATCGCCTCCGTCAAGGGGGATGTGGACATGGTGAGACTGCTGCT
CCGCAAGGGGGCGTCTGTGGCGAAAAGATGCGGTTCATTTGCCCCGCTTC
ACGGAGCAGCGTCTAAAGGTAAAACAGAGCTGGTAGAGCTGCTGGTGAAC
CACGGTGCGACATTAGACGTGCGGGACGTCTTCCAGAACACGCCGCTCAT
GTTAGGGATAGCATCCGGAAACTTTGACAGCAGTGACGAGGGTATAAAGC
TGATACTAGCAGCGATGAAGACCAAGTTGCTGAGATGCTGCAACCCGAAG
TGTGGCAAACCAGGCTACAGGTCAACCGGTGCCCTGAAGCTGTGTGCGCG
GTATCACATCCTAGAACATGGATACGACGATTTTGTATCTGTTAGTCAGT
CACTCGTAGCCCATGTGAAGCGTGGCGCCTCGGCAGATGGTACTGTCCCT
GGCTGTACATGTCTCCCAGGCCGTGGTGAGGAAAAGGGCGACAGCCAGTA
GATGTTCATCGCCTCCGTCAAGGGGGATGTGGACATGGTGAGACTGCTGC
TCCGCAAGGGGGCGTCTGTGGCGAAAAGATGCGGTTCATTTGCCCCGCTT
CACGGAGCAGCGTCTAAAGGTAAAACAGAGCTGGTAGAGCTGCTGGTGAA
CCACGGTGCGACATTAGACGTGCGGGACGTCTTCCAGAACACGCCGCTCA
TGTTAGGGATAGCATCCGGAAACTTTGACAGCAGTGACGAGGGTATAAAG
CTGATACTAGCAGCGATGAAGACCAAGTTGCTGAGATGCTGCAACCCGAA
GTGTGGCAAACCAGGCTACAGGTCAACCGGTGCCCTGAAGCTGTGTGCGC
GGTATCACATCCTAGAACATGGATACGACGATTTTGTATCTGTTAGTCAG
TCACTCGTAGCCCATGTGAAGCGTGGCGCCTCGGCAGATGGTACTGTCCC
TGGCTGTACATGTCTCCCAGGCCGTGGTGAGGAAAAGGGCGACAGCCAGT
AGATGTTCATCGCCTCCGTCAAGGGGGATGTGGACATGGTGAGACTGCTG
CTCCGCAAGGGGGCGTCTGTGGCGAAAAGATGCGGTTCATTTGCCCCGCT
TCACGGAGCAGCGTCTAAAGGTAAAACAGAGCTGGTAGAGCTGCTGGTGA
ACCACGGTGCGACATTAGACGTGCGGGACGTCTTCCAGAACACGCCGCTC
ATGTTAGGGATAGCATCCGGAAACTTTGACAGCAGTGACGAGGGTATAAA
GCTGATACTAGCAGCGATGAAGACCAAGTTGCTGAGATGCTGCAACCCGA
AGTGTGGCAAACCAGGCTACAGGTCAACCGGTGCCCTGAAGCTGTGTGCG
CGGTATCACATCCTAGAACATGGATACGACGATTTTGTATCTGTTAGTCA
GTCACTCGTAGCCCATGTGAAGCGTGGCGCCTCGGCAGATGGTACTGTCC
CTGGCTGTACATGTCTCCCAGGCCGTGGTGAGGAAAAGGGCGACAGCCAG
TAGATGTTCATCGCCTCCGTCAAGGGGGATGTGGACATGGTGAGACTGCT
GCTCCGCAAGGGGGCGTCTGTGGCGAAAAGATGCGGTTCATTTGCCCCGC
TTCACGGAGCAGCGTCTAAAGGTAAAACAGAGCTGGTAGAGCTGCTGGTG
AACCACGGTGCGACATTAGACGTGCGGGACGTCTTCCAGAACACGCCGCT
CATGTTAGGGATAGCATCCGGAAACTTTGACAGCAGTGACGAGGGTATAA
AGCTGATACTAGCAGCGATGAAGACCAAGTTGCTGAGATGCTGCAACCCG
AAGTGTGGCAAACCAGGCTACAGGTCAACCGGTGCCCTGAAGCTGTGTGC
GCGGTATCACATCCTAGAACATGGATACGACGATTTTGTATCTGTTAGTC
AGTCACTCGTAGCCCATGTGAAGCGTGGCGCCTCGGCAGATGGTACTGTC
CCTGGCTGTACATGTCTCCCAGGCCGTGGTGAGGAAAAGGGCGACAGCCA
GTAGATGTTCATCGCCTCCGTCAAGGGGGATGTGGACATGGTGAGACTGC
TGCTCCGCAAGGGGGCGTCTGTGGCGAAAAGATGCGGTTCATTTGCCCCG
CTTCACGGAGCAGCGTCTAAAGGTAAAACAGAGCTGGTAGAGCTGCTGGT
GAACCACGGTGCGACATTAGACGTGCGGGACGTCTTCCAGAACACGCCGC
TCATGTTAGGGATAGCATCCGGAAACTTTGACAGCAGTGACGAGGGTATA
AAGCTGATACTAGCAGCGATGAAGACCAAGTTGCTGAGATGCTGCAACCC
GAAGTGTGGCAAACCAGGCTACAGGTCAACCGGTGCCCTGAAGCTGTGTG
CGCGGTATCACATCCTAGAACATGGATACGACGATTTTGTATCTGTTAGT
CAGTCACTCGTAGCCCATGTGAAGCGTGGCGCCTCGGCAGATGGTACTGT
CCCTGGCTGTACATGTCTCCCAGGCCGTGGTGAGGAAAAGGGCGACAGCC
AGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000016 | genome | Sc0000016:4092485..4097498 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95277_evm1 |
| Biotype | protein_coding |
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