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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95281_evm4 >transcript:BL95281_evm4-protein ID=transcript:BL95281_evm4-protein|Name=transcript:BL95281_evm4|organism=Branchiostoma lanceolatum|type=polypeptide|length=506bp
MRTSQLFRRYLFIIPICLGTIFVFYVTNNLMDKSRNSRDLNSDCDCSKRD
IPNRQDIPNRTDTPNRQDIPNRQDIPNRQDIPNRQDIPNRQDIPNKQDIP
KKQENIPKAENVQNVKKIPAIPEQTDPKCAREPKDDPNVNPLSKFYSVWY
DPPTEVVKKDQVKILIWTELWDKQMRKVLPKGKGAKCMSMPNCIFTGFRS
EIHEADAVLFEVSNLQKDYNASVFPTVRYPRQHWVWYHTECPGFPSINFE
TYRSVFNWTITYRADSDSSGAWGSLHRTYQRLKVEGVDPNKDYTVGKTKL
AVWFISKCNTQANRVAYATKLVKYMHIDVFGRCGKTVCAKWNVTCMPGII
RQYKFYLAFENMICKEYLTEKFWRNALANDVIPVVMGANRSDYERLAPPH
SYIHVDDFKSAKELADYLMMLGQDKEKYNAYFKWKTHPPKNIPLEEGMWC
NMCRELLNRCPTKRKLYTNLRGWFEGENHSMCDPMVDVKFKELQFEDNRF
KVASYA Run BLAST on NCBI mRNA from alignment at Sc0000017:1455496..1462169+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95281_evm4 ID=transcript:BL95281_evm4|Name=transcript:BL95281_evm4|organism=Branchiostoma lanceolatum|type=mRNA|length=6674bp|location=Sequence derived from alignment at Sc0000017:1455496..1462169+ (Branchiostoma lanceolatum)
GGCAGGGCAAAAATAATAACGACGCCCAGTGGGATTCTGTCTTTTTTCTG
AGAAAGAGAAGGGTTAATCTCATTATGTTAGTCAACCGTTAAACCCTGTT
TCTTCCATTGGGTTCATTTAGCCGTCACTCTCAGCAAGGACATTATATAT
GATGTCCTTGCTCTCAGTGAGCATTTTTTAAGAAAATATATAATATTCCT
GTCTATTCATGTTATCATAGGCTGAAAACTTGAAGTGGCCATGATTTTTA
CGAGATGACCATGTGTGCAAATCGACCTTTGACCTGTGATGTCTATACTT
GTCCAATAGGTGACAGAAAACAGACTACAGCATAATAATGTGCTAGTAAT
TAGGGGCTTTTTTGGGTGTAAGGAATTTTCGTAGGCAAATGGAATTACAT
GCCTGATTTCCCTCACAATCTTTAAAAAAAGAAACCCATTTTAGATTGAT
TGTGTTACTCTTAATTCTAAATTAAACACGGGTTACGTAATCTTTTGTAT
CTAACAATTACCAAGAAAAAAATTAAGAGATTTTCATGATGTTTCTAATG
TTTACAATCTAAAACTAGTTCAGAGTGACCTTTGACCTACACGAGTGTCC
CTGAAGTGTAGAACTTGTTCAACAGGTAGAGTGACAGACAACTGCGCAAG
CGTCACTCTGTCTTTTTAGGGGGCCATTTCGGATAAGGATTGACTTCGAT
TGTATCGTTTTCTGCAATCTTCACGAAATGTTGCAAAATTCCAGATTTCC
AGACATCGTGAGCTACCGCCATCAATACAGATCCCGGTAAGTGCATGTTC
ATGTTACTAGAGGTAGTCTACAGAAGACTTCTTGTGCTGACGGAGATATT
GTAGAAATTGGTCAGATAGGCTGAATGATTTGCCAAATGAGTATACAGTC
AGCCATAGGGTTACGAATGTGCAAGCCACAATGCAAACAATGTAAATTAT
TTCCCCAATTTTGGTCATTTTCTAAAATCTTTCAAGCAACACGGTAGATA
CTAGATACTAAGGGTAGGGAGGGGGAAATTTCAGATAAAATCTGCCCAAT
GAATGGTTAAAAACAGCTTTTGTTTCGTTAATACTGGAAGTCTTTCGTCT
CAGAATATACATCCTTCTTGAATATGTATGCAAAACATTAACCAGGCTAA
TAAGATCGATACTAATAAGTTATACAAAAAGTCTTATGGCTTTCATGGAT
ACATGTATGTTCATGAAAAAATTACTAGAACCAGTTACAACGCTCGTGTT
TCACATTTTATGCAGTACAGCATTCTTATGTTCAATTTGACGTAGTATGA
GTTTAACAATTCTTTAAAATCACCTTGGATAGAATATTTCCAGCATTAGT
AGGCAATTACGAATATAACGACAGAAATGAAAATAGGGCTGCGTACTAGT
ATATTTTTTAATCTTTAGAGTAAATTGTGTTACAAAACGCTAACATGTGT
TTATTACGCGTTGTTTCAGACGGTTCTGAGAGCAGAGGTGTAGTCTGCAC
GTCTACTTTCTGAAGAGAGAAATCCAGAGAACGGAAAGTCCTTGATCCAA
TTGTACACCAAGGTCACATTTCAAAACCAGACGGTACAAGATTTTGGCAA
TCCAAAATGAGAACATCTCAACTGTTTCGGCGGTATTTGTTCATCATCCC
AATATGCTTGGGTACCATTTTCGTATTCTATGTCACAAATAATTTGATGG
ATAAGTCGAGGAATTCCAGGGATCTCAACTCTGACTGTGACTGTAGCAAA
CGTGACATCCCGAACAGACAAGATATCCCGAATAGAACAGATACCCCGAA
CAGACAAGATATCCCGAACAGACAAGATATCCCGAACAGGCAAGATATCC
CGAACAGACAAGATATCCCGAACAGGCAAGATATCCCCAACAAACAAGAT
ATCCCTAAAAAGCAAGAGAATATCCCTAAAGCTGAAAATGTCCAAAACGT
TAAGAAAATCCCTGCGATTCCCGAACAGACCGATCCAAAGTGTGCCCGCG
AACCAAAAGATGACCCCAATGTCAACCCCCTCTCAAAGTTTTATTCTGTT
TGGTATGACCCCCCTACCGAGGTAGTAAAGAAAGACCAGGTGAAGATTCT
GATTTGGACAGAGCTATGGGATAAACAAATGAGGAAGGTACTACCAAAGG
GTAAAGGTGCGAAATGCATGAGTATGCCAAACTGTATCTTTACCGGATTC
CGGTCTGAGATCCACGAAGCTGACGCCGTTCTCTTCGAAGTGAGCAACTT
GCAGAAGGACTATAACGCGTCAGTGTTTCCGACAGTGCGTTACCCTCGTC
AGCATTGGGTTTGGTATCACACAGAATGCCCTGGCTTCCCGTCTATAAAC
TTTGAAACATACAGGAGTGTCTTCAACTGGACAATCACCTACAGAGCCGA
CTCAGATTCGTCGGGAGCTTGGGGATCGCTACACAGAACCTACCAGAGGC
TCAAAGTTGAAGGTGTTGACCCCAACAAGGACTACACAGTAGGGAAGACG
AAACTTGCAGTCTGGTTCATCAGTAAATGCAACACGCAAGCCAACCGCGT
CGCGTATGCAACCAAACTAGTCAAATACATGCACATCGATGTCTTCGGAA
GATGCGGTAAGACCGTCTGTGCGAAATGGAACGTCACCTGTATGCCTGGT
ATCATCAGACAATACAAGTTCTACCTGGCCTTCGAGAACATGATATGCAA
AGAATACCTCACCGAGAAGTTTTGGAGGAATGCTCTAGCAAACGACGTCA
TTCCAGTTGTCATGGGAGCCAATAGGTCTGACTACGAGAGGCTAGCACCC
CCACACTCCTACATTCACGTGGACGACTTCAAGTCAGCCAAGGAACTAGC
AGATTACTTGATGATGCTTGGTCAAGATAAGGAGAAATACAACGCCTACT
TTAAGTGGAAGACCCATCCCCCTAAGAACATTCCTTTAGAGGAAGGAATG
TGGTGTAATATGTGTAGGGAGCTTCTCAATAGGTGCCCAACTAAAAGGAA
ACTGTACACAAATTTGAGAGGGTGGTTTGAAGGGGAAAACCATTCAATGT
GTGATCCAATGGTAGATGTAAAATTTAAGGAGCTTCAGTTTGAGGACAAC
CGATTCAAAGTTGCTTCATATGCATAAGCATTCAGAATGAGCATCACTCA
TTTTTTTGTATTTTTTGTATTTTCTTTTATCAGTTGCCTTTTTGTTTACC
ATGTGCACATTTTATGGTGTATTTATGTCATTTTAAGTTAACATCTGAAG
TGAGACAATGTGAAGTTGACAGAAAAATGAATCGTTCTTTTTTACACGTA
GGCTTAGACAGCACAGTGTTGGCCATTCCAGTGAACTATTATTGATTATT
CACTGTCTATGGTAGTTGATTTCTGTATATAGGTGGACCACTGTTTATTG
GTACATGTATATAAAACCAATGAAATTAAATGAAATTAGCCTTTAGATTT
GCTTGATAATATGTTTACTTCTGTGTACACTTTATTAAGGAATATGCAAA
CGTGGTGATTAGTTATGTGCGTTATCACATTATCATTTTTAGATAGTTTG
ATAGTTGTGTTGTTATCATGGTCAATAAAAATCATACAAATTTCAATCTG
TGAATTTGTCGTGCTTGTATAGGCTTTCGAGAAAGAAAAACATGTAGTAC
ATTTTGTCTATACCTTCCTTTTTTTTAACATACCATTGTGATTTTTATTC
ATTATAGGACCTTACGAAAAATAAATCCAAATATAAACTGGACTGTAGTT
AGTGACGGGCCGACCTCCAAGAACATTATACTAGATGACCTTGCATACTT
TAAGTTTGTCAATTCAATGACCTTGCATACATAAAGTTTGTAAGTTTAAT
GACATTCCTTACATCAAGCTTTGTTATTTCAATGACCTTGCCTGCATAAA
CTATGCAACGTCATTGAACTAATATGTCCTTGAACAATATACTAGTAGTT
TACAAGTCGTTCAAACTGCCAGTGGTAAAAATGTATTTTGCTACGTAGCT
ATATTGACAGTAAAATATGAATCTTAGCGTCACAATCCCTCTCAAAATGA
TTTTGCTATGTTTACTCTAACATTTTAGGTGTCTGCATAGTAACCTTTGC
CCTAAAAACTCCATCTCCACACGTTCAACTGGTCGAGTAAATATCATAAT
TATGATAATGATAACCTTTATTGTACATTCATGCCCTATTGGGCTAAGTA
CAGGCATACAGGTACAATGTACATGGTAATGTTCATATAATGACACTGAC
AGGATTTCTAATATATATAATACTAATCTAAAACAAACAATGGTTCTAAA
ACTACTCTAATTAATTGGTTCGGCTTCTTCTCGTCTCTTTGTGATGTTAG
AAATATTGACCTTTGACCTCACGGTTACTTGTTTAGTCGAGCATAACGTT
ATAATTATAAGACAGAACACACAAGGCTCGATTGCATCGTGTTACATGAT
CAGTAAAACTGTTTTTAGTCGCTGACTGTCTATCATAACTGTAGGTCTCT
GTTGGTTGACCTTTGACCCATGTGAGTTCGTTGTCACTTGTTCAACTGGT
TGATTAAATGTCATTGTAAAACTCTGTACAGACAAGGATCGACTTCGAGT
TCATCGTGTTACACGATCTGCAATACTGCCAGTGTACAGTGTGGGTGGGG
TGTCTGTTGGCTGACCTATGACCTCGCTGTTACTTGTTCAACTAGTCGAG
CCAAACGTCACGGAAAACGTCATGAATATATTAAGACATGTGGGGAAGGA
TCGACTTCGATTTCATCGTTTCGCAAAATCTCAGACTATATCTTTACACA
AAAAAACTACGCCATGAAAAAGAACGCATGTTCTTTTTGGATGTAACAAT
TAGCTGCAATCTCAAACTACGTACACACTGAACTTTGAAGATGACTAGGA
GACGATTTTTTTATTGTAAAACTCTGTGCACACAAGGATCGACTTCGATT
TCATCGAGTTACTATAGTGCACGATCTGTAATACTGTTTTCAGTCGCTGC
CAGTCTATAATGAAGGTGTGTGTTGGTTGACCTTTGACCTCGCTGTTACT
TGTACAACAAGTTGAGCAAAACGTCACGTAAAACTCTGAATAGCTCTAGA
CAAGCGGGGGAGGATCGACTTCGATTTCATCGTTTTTACAAAATCTCAGA
CCTTATCTTCACACAAAAAAACTACGCCATGAAAAAGAACGCATGTTCTT
TTTGGATGTCAACAATTAGCTGTGATTACTGCCATACTACTTTAAAGACG
CACTGAACTTTGAAGATGACTAGAGGATTAGATTTCATTGCAAAACTCTG
AACTGACAAGGATTGACTTCCATTTTATAGTGTTACAAGATCTGCAATAA
ATTTTTTTAGTCGCTGCCAGTCTTTGTGTAGGTGTCTGTTTGGTTGACCT
TTGATCGATCTAAGTCGTTGTTACTTGTTCAACTGGTCGAGCAAAATGTC
ACGTAAAACCCTGAATAGATTAAGACAAGCGGGGGAGGATAGACTTCGAG
TTCATCGTTTTTACAAAATCTCAGACTGTGAATTTCTACGCCATGAATTC
TTTTGGGATGAAACGTTTTTTTTAGATATTACCATTCCATGGCTTGCGAT
GTAAAATGCTACAGCGGTTGAAACAATATCAAATAGCTGAATAAACCTCC
CAAATCAAACGCATGAAACGTCGATATTGTCATTTATCCCGTGCTTGAAT
CTATGGCCAAACAAATTGAGTGACAGAGTAGAACACAAGCGTATGATTAA
AGGCCGCCATTTTGTTGGTATGGATTGACCTTGGTTGCATCACTGGGCCT
CTGTGTATGTGTGTACATGTTCATGATCGCCGACAAAATTCTGTGTTAAT
TCAATAAAATTTTACATTAGATATACTGTAATTGATTAGATGATAACAAC
ACAAGCGGGTGCCTAGGGGTCGCCATTTTGTTGGCAACAACACAAGCGCA
TGATTTTGGGTCGCCATTTTGTTGGTAAGGCCTGACCTTCGAGAGCCTCT
GTGTATTGTTAAAACGAATTACATGTGCATGATCGCTCCCCAAATCGTTC
TATAATTGATTTAATCAAATCTAACATGGGTTCTTAAATGAGCCCTATGT
AGATAATCATACAGTCTTCTTATCATCATTTTGATGTAGAAATCACAAAA
TGTATGTGTGTTATTGTGCATAATGTTTGTAAAGTTTGAGATGTAATGTT
TGTTAAAGTTCATTGATGTTTGACCTATGCAGGAGGCCCTGAACCTTGTT
TAATTAGGCGTCAGTAATTCTGAAAAAAGTTACTTTGCACACGTAACCGA
ACAATTACGCGGTCATTTTGGGCAAGGACTAACGTCAATTATGTCGTATT
TAACATTCTTTTAGCCATTTAAACAAAAGATCAGATTTTAGAAGCATCTC
GACTGTAATTGTTGTGGTGCCAGTAAACGTCACACAGTTAAGTCTTCCAT
ACATTGTTAATAATTAAGGGCGAAAACCAAATAATAGCATTCCGGATCTT
TAACTTACAAGTGTTCCGATACCTTTTAATGGTCCCTTTCTAATCAGTTA
CAAATTGAACCTACTATGTAGACGCCATGCATCATCAGTTGATGTCTGCT
TATAATAAATGAAGACAATTTTGAAGACAATTTTGAACAATATTTTGAAG
ACTATTTTGAAGACTATTTTCAAT Coding sequence (CDS) from alignment at Sc0000017:1455496..1462169+ >transcript:BL95281_evm4 ID=transcript:BL95281_evm4|Name=transcript:BL95281_evm4|organism=Branchiostoma lanceolatum|type=CDS|length=1521bp|location=Sequence derived from alignment at Sc0000017:1455496..1462169+ (Branchiostoma lanceolatum)
ATGAGAACATCTCAACTGTTTCGGCGGTATTTGTTCATCATCCCAATATG
CTTGGGTACCATTTTCGTATTCTATGTCACAAATAATTTGATGGATAAGT
CGAGGAATTCCAGGGATCTCAACTCTGACTGTGACTGTAGCAAACGTGAC
ATCCCGAACAGACAAGATATCCCGAATAGAACAGATACCCCGAACAGACA
AGATATCCCGAACAGACAAGATATCCCGAACAGGCAAGATATCCCGAACA
GACAAGATATCCCGAACAGGCAAGATATCCCCAACAAACAAGATATCCCT
AAAAAGCAAGAGAATATCCCTAAAGCTGAAAATGTCCAAAACGTTAAGAA
AATCCCTGCGATTCCCGAACAGACCGATCCAAAGTGTGCCCGCGAACCAA
AAGATGACCCCAATGTCAACCCCCTCTCAAAGTTTTATTCTGTTTGGTAT
GACCCCCCTACCGAGGTAGTAAAGAAAGACCAGGTGAAGATTCTGATTTG
GACAGAGCTATGGGATAAACAAATGAGGAAGGTACTACCAAAGGGTAAAG
GTGCGAAATGCATGAGTATGCCAAACTGTATCTTTACCGGATTCCGGTCT
GAGATCCACGAAGCTGACGCCGTTCTCTTCGAAGTGAGCAACTTGCAGAA
GGACTATAACGCGTCAGTGTTTCCGACAGTGCGTTACCCTCGTCAGCATT
GGGTTTGGTATCACACAGAATGCCCTGGCTTCCCGTCTATAAACTTTGAA
ACATACAGGAGTGTCTTCAACTGGACAATCACCTACAGAGCCGACTCAGA
TTCGTCGGGAGCTTGGGGATCGCTACACAGAACCTACCAGAGGCTCAAAG
TTGAAGGTGTTGACCCCAACAAGGACTACACAGTAGGGAAGACGAAACTT
GCAGTCTGGTTCATCAGTAAATGCAACACGCAAGCCAACCGCGTCGCGTA
TGCAACCAAACTAGTCAAATACATGCACATCGATGTCTTCGGAAGATGCG
GTAAGACCGTCTGTGCGAAATGGAACGTCACCTGTATGCCTGGTATCATC
AGACAATACAAGTTCTACCTGGCCTTCGAGAACATGATATGCAAAGAATA
CCTCACCGAGAAGTTTTGGAGGAATGCTCTAGCAAACGACGTCATTCCAG
TTGTCATGGGAGCCAATAGGTCTGACTACGAGAGGCTAGCACCCCCACAC
TCCTACATTCACGTGGACGACTTCAAGTCAGCCAAGGAACTAGCAGATTA
CTTGATGATGCTTGGTCAAGATAAGGAGAAATACAACGCCTACTTTAAGT
GGAAGACCCATCCCCCTAAGAACATTCCTTTAGAGGAAGGAATGTGGTGT
AATATGTGTAGGGAGCTTCTCAATAGGTGCCCAACTAAAAGGAAACTGTA
CACAAATTTGAGAGGGTGGTTTGAAGGGGAAAACCATTCAATGTGTGATC
CAATGGTAGATGTAAAATTTAAGGAGCTTCAGTTTGAGGACAACCGATTC
AAAGTTGCTTCATATGCATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000017 | genome | Sc0000017:1455496..1462169 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95281_evm4 |
| Biotype | protein_coding |
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