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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95285_evm1 >transcript:BL95285_evm1-protein ID=transcript:BL95285_evm1-protein|Name=transcript:BL95285_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=634bp
MDPGKQEISLLGGILSCGICGGSKEKELKASVCLHLFCEDCLQEKAGEDG
AFPCPRCKKAVALPTGGVDDLENSLWVHDVRRALESRPAAPDSPPAIREG
SCEHPVENARIFCENCDKAICEDCVQDPNPHKGHQVRLLSDAIKRKQGEV
QTVISSCLVGVSNGGATLNKLDASDRTLRARRDKLVQEIEKEAQVLIDRI
VARRERLGADVEATYNEKSRLLQEKRSETIETVAHLLHAVEKAETSCKED
NYLRLSGAKSDMIHLSQRLIHVTAEIDLDAFDLGLKFTSKGIPEDEAFRI
GRVEDLPVIRRVSSDSTDSRDDGPVDANENRAKNGVTLNGNNNGEKNGEA
VNSDETVLAEHREDQCRTSDRSVMIGRAGTKQQQFNHPCGLAVSEDDVIF
VADTENKRIQVLNSDGEFVRVMPTLSKTWLGRNTEHAPVWLAVSPEGNLY
VTYQRKPGVDVFQEDGAFVTSFARNVKSSRVTISPLDGNMVVGSESGIRI
FTSDGQAQKAFSGPAFLGGVAVSPQGDILVSDRREHCVKVYRPDGKLQRT
LSGWGEKEGQCYSPRGLCVDRRGNVIVADRDNGRVQMFNSSGKFLRVLGT
RADGLDRPEEVALLSDGRIVVLDSVHQCLFIISP Run BLAST on NCBI mRNA from alignment at Sc0000017:2441990..2444816- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95285_evm1 ID=transcript:BL95285_evm1|Name=transcript:BL95285_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2827bp|location=Sequence derived from alignment at Sc0000017:2441990..2444816- (Branchiostoma lanceolatum)
ATGGACCCGGGCAAGCAGGAAATATCACTTCTCGGAGGGATTTTGTCGTG
TGGCATTTGCGGAGGATCAAAGGAGAAAGAACTGAAGGCGTCGGTATGCC
TTCACCTGTTTTGCGAGGACTGTTTGCAAGAGAAGGCTGGAGAAGACGGG
GCGTTCCCGTGCCCGAGGTGTAAGAAAGCTGTGGCTCTCCCAACCGGGGG
TGTCGATGACCTTGAAAACAGCCTGTGGGTACATGACGTCAGGAGAGCGC
TAGAAAGTAGGCCGGCCGCGCCAGACTCGCCGCCGGCGATCCGAGAAGGC
AGCTGCGAACACCCCGTGGAAAACGCGCGGATCTTCTGCGAGAACTGCGA
CAAGGCTATCTGCGAGGACTGCGTCCAAGACCCCAACCCACACAAGGGTC
ACCAGGTGCGCCTACTTAGCGATGCCATCAAGCGGAAGCAAGGAGAAGTG
CAGACGGTGATATCGTCGTGCCTTGTGGGCGTTTCAAACGGTGGGGCGAC
CCTGAACAAGTTAGACGCTTCTGACAGGACTCTTCGCGCAAGGAGAGACA
AACTCGTTCAGGAAATCGAGAAAGAAGCCCAGGTTTTGATTGACAGGATC
GTTGCACGACGCGAGCGTCTAGGAGCAGACGTCGAAGCGACGTACAACGA
AAAGAGTCGCCTCCTTCAAGAGAAGAGATCGGAGACGATAGAGACGGTCG
CCCACTTACTTCACGCAGTAGAAAAAGCTGAGACGTCTTGTAAGGAGGAC
AACTACTTAAGACTGTCAGGGGCGAAGTCAGACATGATACATCTGAGCCA
GAGGCTCATACACGTCACAGGTAGGAAATGTAGTAAAGTTAAGTAGTTTA
AAGTAGTTTAAAGTACTTAACTTTAAAGTAGTTTGAAGTAGTACACGTTT
AAAGTAGTTAACGTTACTTGAAAATAGTCTGAACTAATGTACGTTACTTT
TTCGAGAACGGTCATAGAGTCTTGTCGACGGTCGGTTTTAAGTTTATAAA
TCCGCTATATTGCATGATAGGACTCTTTAACGTGTGGCACCTAGCACCTG
TCAGTTGACACACTGGGGCATACATTCCCCTGCTGGCATGGCCTGTCCCC
AGGGGCCCTACAGCTAGTAGTCAAAACACGAAGGGATCGCTAGAACCTGT
ATACAACTTGTTTTTGATATATGTGGATACCGCGATGACTGTTGCGAAGT
ACACTTCTAATCTTATTTCTATCTCTGCAGCTGAGATTGACCTTGACGCC
TTTGACCTTGGCTTGAAGTTCACGTCCAAGGGTATTCCTGAGGACGAGGC
GTTTAGAATCGGCCGAGTCGAGGATCTACCGGTCATCCGTCGGGTCAGTT
CGGACAGTACGGACAGTAGAGATGACGGACCTGTGGACGCTAACGAAAAC
AGAGCGAAAAACGGGGTCACTTTAAACGGCAACAACAATGGCGAAAAGAA
CGGTGAGGCTGTAAACTCTGACGAAACGGTGCTAGCAGAGCACAGAGAAG
ATCAGTGTCGGACATCGGACCGGTCCGTCATGATCGGAAGAGCCGGCACG
AAACAACAACAGTTCAACCACCCGTGCGGACTCGCCGTCTCCGAAGATGA
CGTCATCTTCGTCGCCGATACCGAGAACAAGCGAATCCAGGTGTTGAACA
GCGACGGCGAGTTCGTGCGCGTCATGCCGACTCTCAGCAAGACGTGGCTC
GGGAGGAACACGGAGCATGCGCCGGTCTGGCTCGCAGTCAGCCCCGAGGG
GAACCTCTACGTCACCTACCAGAGGAAACCGGGAGTCGACGTGTTTCAGG
AAGATGGCGCCTTCGTGACGTCATTCGCGCGAAACGTCAAGTCCAGTCGG
GTAACGATTAGTCCGCTGGATGGGAACATGGTGGTCGGGTCGGAGAGCGG
GATTCGGATCTTCACGTCGGACGGCCAGGCGCAGAAGGCTTTCTCTGGCC
CGGCGTTCCTGGGAGGGGTGGCCGTCAGCCCACAGGGGGACATCCTGGTG
TCGGACAGGCGGGAACACTGCGTCAAGGTCTACAGGTAAGACACACGTCA
TCTCCAAGCAGATAGTGGGGAAGGTCTTTGTGACACTGTATGTGGTATAC
AGGACATATAGTACATACTTTCCCGATGTCTTTTCAAAGTCGTCGACCAA
TCAAAAGTCCCCATTTCATATCGTTCATGACCTCATTACGTCATCAAAGT
GCCACAAATTTTCAAATGCATTTCTCAGAAATTGGACAAATGTAGTTATG
ATAACATGTATAGTATCAAAATTTTTCAAGGATCTATGCGTCATACAGGA
ATTTGTTACTCTTATACGGGTCAGTTTGGATAGGCTATATGATAATGGCG
TTAATGACCCGCCAATTCCTCGGTGTATATGGTCTCATAAGGGTTGCTCA
CTCGGTGATTTCATTCGGTGGTTATAGCAAATGGCTAGGCCTTATGACAC
CATATACACCTCGGGGCGGGTCATTAACCCTTAATTGAAATAGAAAAGTA
AATAAATAGATACATGGATAAATCAACTTGTTTGTGTTGTTCCTTAGACC
CGACGGTAAGCTCCAGAGAACGCTGAGCGGATGGGGTGAGAAGGAAGGCC
AGTGTTACTCCCCCCGCGGCCTCTGTGTGGACCGCCGCGGGAACGTCATC
GTGGCGGACCGGGACAACGGCCGGGTGCAGATGTTCAACTCCAGCGGCAA
GTTCCTCAGGGTGCTGGGAACGAGAGCGGACGGGCTGGACCGACCAGAAG
AGGTCGCGTTGCTAAGTGACGGTCGAATCGTCGTCCTAGACTCTGTGCAT
CAGTGTCTCTTTATCATCTCTCCATAG Coding sequence (CDS) from alignment at Sc0000017:2441990..2444816- >transcript:BL95285_evm1 ID=transcript:BL95285_evm1|Name=transcript:BL95285_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=5715bp|location=Sequence derived from alignment at Sc0000017:2441990..2444816- (Branchiostoma lanceolatum)
ATGGACCCGGGCAAGCAGGAAATATCACTTCTCGGAGGGATTTTGTCGTG
TGGCATTTGCGGAGGATCAAAGGAGAAAGAACTGAAGGCGTCGGTATGCC
TTCACCTGTTTTGCGAGGACTGTTTGCAAGAGAAGGCTGGAGAAGACGGG
GCGTTCCCGTGCCCGAGGTGTAAGAAAGCTGTGGCTCTCCCAACCGGGGG
TGTCGATGACCTTGAAAACAGCCTGTGGGTACATGACGTCAGGAGAGCGC
TAGAAAGTAGGCCGGCCGCGCCAGACTCGCCGCCGGCGATCCGAGAAGGC
AGCTGCGAACACCCCGTGGAAAACGCGCGGATCTTCTGCGAGAACTGCGA
CAAGGCTATCTGCGAGGACTGCGTCCAAGACCCCAACCCACACAAGGGTC
ACCAGGTGCGCCTACTTAGCGATGCCATCAAGCGGAAGCAAGGAGAAGTG
CAGACGGTGATATCGTCGTGCCTTGTGGGCGTTTCAAACGGTGGGGCGAC
CCTGAACAAGTTAGACGCTTCTGACAGGACTCTTCGCGCAAGGAGAGACA
AACTCGTTCAGGAAATCGAGAAAGAAGCCCAGGTTTTGATTGACAGGATC
GTTGCACGACGCGAGCGTCTAGGAGCAGACGTCGAAGCGACGTACAACGA
AAAGAGTCGCCTCCTTCAAGAGAAGAGATCGGAGACGATAGAGACGGTCG
CCCACTTACTTCACGCAGTAGAAAAAGCTGAGACGTCTTGTAAGGAGGAC
AACTACTTAAGACTGTCAGGGGCGAAGTCAGACATGATACATCTGAGCCA
GAGGCTCATACACGTCACAGCTGAGATTGACCTTGACGCCTTTGACCTTG
GCTTGAAGTTCACGTCCAAGGGTATTCCTGAGGACGAGGCGTTTAGAATC
GGCCGAGTCGAGGATCTACCGGTCATCCGTCGGGTCAGTTCGGACAGTAC
GGACAGTAGAGATGACGGACCTGTGGACGCTAACGAAAACAGAGCGAAAA
ACGGGGTCACTTTAAACGGCAACAACAATGGCGAAAAGAACGGTGAGGCT
GTAAACTCTGACGAAACGGTGCTAGCAGAGCACAGAGAAGATCAGTGTCG
GACATCGGACCGGTCCGTCATGATCGGAAGAGCCGGCACGAAACAACAAC
AGTTCAACCACCCGTGCGGACTCGCCGTCTCCGAAGATGACGTCATCTTC
GTCGCCGATACCGAGAACAAGCGAATCCAGGTGTTGAACAGCGACGGCGA
GTTCGTGCGCGTCATGCCGACTCTCAGCAAGACGTGGCTCGGGAGGAACA
CGGAGCATGCGCCGGTCTGGCTCGCAGTCAGCCCCGAGGGGAACCTCTAC
GTCACCTACCAGAGGAAACCGGGAGTCGACGTGTTTCAGGAAGATGGCGC
CTTCGTGACGTCATTCGCGCGAAACGTCAAGTCCAGTCGGGTAACGATTA
GTCCGCTGGATGGGAACATGGTGGTCGGGTCGGAGAGCGGGATTCGGATC
TTCACGTCGGACGGCCAGGCGCAGAAGGCTTTCTCTGGCCCGGCGTTCCT
GGGAGGGGTGGCCGTCAGCCCACAGGGGGACATCCTGGTGTCGGACAGGC
GGGAACACTGCGTCAAGGTCTACAGACCCGACGGTAAGCTCCAGAGAACG
CTGAGCGGATGGGGTGAGAAGGAAGGCCAGTGTTACTCCCCCCGCGGCCT
CTGTGTGGACCGCCGCGGGAACGTCATCGTGGCGGACCGGGACAACGGCC
GGGTGCAGATGTTCAACTCCAGCGGCAAGTTCCTCAGGGTGCTGGGAACG
AGAGCGGACGGGCTGGACCGACCAGAAGAGGTCGCGTTGCTAAGTGACGG
TCGAATCGTCGTCCTAGACTCTGTGCATCAGTGTCTCTTTATCATCTCTC
CATAGATGGACCCGGGCAAGCAGGAAATATCACTTCTCGGAGGGATTTTG
TCGTGTGGCATTTGCGGAGGATCAAAGGAGAAAGAACTGAAGGCGTCGGT
ATGCCTTCACCTGTTTTGCGAGGACTGTTTGCAAGAGAAGGCTGGAGAAG
ACGGGGCGTTCCCGTGCCCGAGGTGTAAGAAAGCTGTGGCTCTCCCAACC
GGGGGTGTCGATGACCTTGAAAACAGCCTGTGGGTACATGACGTCAGGAG
AGCGCTAGAAAGTAGGCCGGCCGCGCCAGACTCGCCGCCGGCGATCCGAG
AAGGCAGCTGCGAACACCCCGTGGAAAACGCGCGGATCTTCTGCGAGAAC
TGCGACAAGGCTATCTGCGAGGACTGCGTCCAAGACCCCAACCCACACAA
GGGTCACCAGGTGCGCCTACTTAGCGATGCCATCAAGCGGAAGCAAGGAG
AAGTGCAGACGGTGATATCGTCGTGCCTTGTGGGCGTTTCAAACGGTGGG
GCGACCCTGAACAAGTTAGACGCTTCTGACAGGACTCTTCGCGCAAGGAG
AGACAAACTCGTTCAGGAAATCGAGAAAGAAGCCCAGGTTTTGATTGACA
GGATCGTTGCACGACGCGAGCGTCTAGGAGCAGACGTCGAAGCGACGTAC
AACGAAAAGAGTCGCCTCCTTCAAGAGAAGAGATCGGAGACGATAGAGAC
GGTCGCCCACTTACTTCACGCAGTAGAAAAAGCTGAGACGTCTTGTAAGG
AGGACAACTACTTAAGACTGTCAGGGGCGAAGTCAGACATGATACATCTG
AGCCAGAGGCTCATACACGTCACAGCTGAGATTGACCTTGACGCCTTTGA
CCTTGGCTTGAAGTTCACGTCCAAGGGTATTCCTGAGGACGAGGCGTTTA
GAATCGGCCGAGTCGAGGATCTACCGGTCATCCGTCGGGTCAGTTCGGAC
AGTACGGACAGTAGAGATGACGGACCTGTGGACGCTAACGAAAACAGAGC
GAAAAACGGGGTCACTTTAAACGGCAACAACAATGGCGAAAAGAACGGTG
AGGCTGTAAACTCTGACGAAACGGTGCTAGCAGAGCACAGAGAAGATCAG
TGTCGGACATCGGACCGGTCCGTCATGATCGGAAGAGCCGGCACGAAACA
ACAACAGTTCAACCACCCGTGCGGACTCGCCGTCTCCGAAGATGACGTCA
TCTTCGTCGCCGATACCGAGAACAAGCGAATCCAGGTGTTGAACAGCGAC
GGCGAGTTCGTGCGCGTCATGCCGACTCTCAGCAAGACGTGGCTCGGGAG
GAACACGGAGCATGCGCCGGTCTGGCTCGCAGTCAGCCCCGAGGGGAACC
TCTACGTCACCTACCAGAGGAAACCGGGAGTCGACGTGTTTCAGGAAGAT
GGCGCCTTCGTGACGTCATTCGCGCGAAACGTCAAGTCCAGTCGGGTAAC
GATTAGTCCGCTGGATGGGAACATGGTGGTCGGGTCGGAGAGCGGGATTC
GGATCTTCACGTCGGACGGCCAGGCGCAGAAGGCTTTCTCTGGCCCGGCG
TTCCTGGGAGGGGTGGCCGTCAGCCCACAGGGGGACATCCTGGTGTCGGA
CAGGCGGGAACACTGCGTCAAGGTCTACAGACCCGACGGTAAGCTCCAGA
GAACGCTGAGCGGATGGGGTGAGAAGGAAGGCCAGTGTTACTCCCCCCGC
GGCCTCTGTGTGGACCGCCGCGGGAACGTCATCGTGGCGGACCGGGACAA
CGGCCGGGTGCAGATGTTCAACTCCAGCGGCAAGTTCCTCAGGGTGCTGG
GAACGAGAGCGGACGGGCTGGACCGACCAGAAGAGGTCGCGTTGCTAAGT
GACGGTCGAATCGTCGTCCTAGACTCTGTGCATCAGTGTCTCTTTATCAT
CTCTCCATAGATGGACCCGGGCAAGCAGGAAATATCACTTCTCGGAGGGA
TTTTGTCGTGTGGCATTTGCGGAGGATCAAAGGAGAAAGAACTGAAGGCG
TCGGTATGCCTTCACCTGTTTTGCGAGGACTGTTTGCAAGAGAAGGCTGG
AGAAGACGGGGCGTTCCCGTGCCCGAGGTGTAAGAAAGCTGTGGCTCTCC
CAACCGGGGGTGTCGATGACCTTGAAAACAGCCTGTGGGTACATGACGTC
AGGAGAGCGCTAGAAAGTAGGCCGGCCGCGCCAGACTCGCCGCCGGCGAT
CCGAGAAGGCAGCTGCGAACACCCCGTGGAAAACGCGCGGATCTTCTGCG
AGAACTGCGACAAGGCTATCTGCGAGGACTGCGTCCAAGACCCCAACCCA
CACAAGGGTCACCAGGTGCGCCTACTTAGCGATGCCATCAAGCGGAAGCA
AGGAGAAGTGCAGACGGTGATATCGTCGTGCCTTGTGGGCGTTTCAAACG
GTGGGGCGACCCTGAACAAGTTAGACGCTTCTGACAGGACTCTTCGCGCA
AGGAGAGACAAACTCGTTCAGGAAATCGAGAAAGAAGCCCAGGTTTTGAT
TGACAGGATCGTTGCACGACGCGAGCGTCTAGGAGCAGACGTCGAAGCGA
CGTACAACGAAAAGAGTCGCCTCCTTCAAGAGAAGAGATCGGAGACGATA
GAGACGGTCGCCCACTTACTTCACGCAGTAGAAAAAGCTGAGACGTCTTG
TAAGGAGGACAACTACTTAAGACTGTCAGGGGCGAAGTCAGACATGATAC
ATCTGAGCCAGAGGCTCATACACGTCACAGCTGAGATTGACCTTGACGCC
TTTGACCTTGGCTTGAAGTTCACGTCCAAGGGTATTCCTGAGGACGAGGC
GTTTAGAATCGGCCGAGTCGAGGATCTACCGGTCATCCGTCGGGTCAGTT
CGGACAGTACGGACAGTAGAGATGACGGACCTGTGGACGCTAACGAAAAC
AGAGCGAAAAACGGGGTCACTTTAAACGGCAACAACAATGGCGAAAAGAA
CGGTGAGGCTGTAAACTCTGACGAAACGGTGCTAGCAGAGCACAGAGAAG
ATCAGTGTCGGACATCGGACCGGTCCGTCATGATCGGAAGAGCCGGCACG
AAACAACAACAGTTCAACCACCCGTGCGGACTCGCCGTCTCCGAAGATGA
CGTCATCTTCGTCGCCGATACCGAGAACAAGCGAATCCAGGTGTTGAACA
GCGACGGCGAGTTCGTGCGCGTCATGCCGACTCTCAGCAAGACGTGGCTC
GGGAGGAACACGGAGCATGCGCCGGTCTGGCTCGCAGTCAGCCCCGAGGG
GAACCTCTACGTCACCTACCAGAGGAAACCGGGAGTCGACGTGTTTCAGG
AAGATGGCGCCTTCGTGACGTCATTCGCGCGAAACGTCAAGTCCAGTCGG
GTAACGATTAGTCCGCTGGATGGGAACATGGTGGTCGGGTCGGAGAGCGG
GATTCGGATCTTCACGTCGGACGGCCAGGCGCAGAAGGCTTTCTCTGGCC
CGGCGTTCCTGGGAGGGGTGGCCGTCAGCCCACAGGGGGACATCCTGGTG
TCGGACAGGCGGGAACACTGCGTCAAGGTCTACAGACCCGACGGTAAGCT
CCAGAGAACGCTGAGCGGATGGGGTGAGAAGGAAGGCCAGTGTTACTCCC
CCCGCGGCCTCTGTGTGGACCGCCGCGGGAACGTCATCGTGGCGGACCGG
GACAACGGCCGGGTGCAGATGTTCAACTCCAGCGGCAAGTTCCTCAGGGT
GCTGGGAACGAGAGCGGACGGGCTGGACCGACCAGAAGAGGTCGCGTTGC
TAAGTGACGGTCGAATCGTCGTCCTAGACTCTGTGCATCAGTGTCTCTTT
ATCATCTCTCCATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000017 | genome | Sc0000017:2441990..2444816 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95285_evm1 |
| Biotype | protein_coding |
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