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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95289_evm4 >transcript:BL95289_evm4-protein ID=transcript:BL95289_evm4-protein|Name=transcript:BL95289_evm4|organism=Branchiostoma lanceolatum|type=polypeptide|length=330bp
MEVFTLLEVIAVLWVTYLVVTWWLERGRLSQLTDKTVLITGCDTGFGNLL
ARRLDQLGLRVFAGCLTEAGVAELRQSCSERLQPIQMDVTRSDSVEAAVR
VVKEAVGSKGLWGLVNNAGILGVAGTMAWATKDDYQAVLNVNLLGMIDVT
NKFLPLLKKSRGRIVNVASVAGRFSTGTGVPYSVSKYGVEAFSDSLRRSM
KFFGVKVHIIEPGYFRTEISNLEVVLRRLDHAWQRQSSETKAEYGEEFLQ
AAKDAMVAKERFKQDPAAVVDAMEHALCATRPRSRYVVGWDARFMIIPIS
WLPTDLGDLVGKLIAPPKMRPTPVCYKDGQ Run BLAST on NCBI mRNA from alignment at Sc0000017:3110157..3113593- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95289_evm4 ID=transcript:BL95289_evm4|Name=transcript:BL95289_evm4|organism=Branchiostoma lanceolatum|type=mRNA|length=3437bp|location=Sequence derived from alignment at Sc0000017:3110157..3113593- (Branchiostoma lanceolatum)
ATGGAGGTGTTTACGTTACTTGAGGTCATCGCTGTCCTGTGGGTGACGTA
TTTGGTGGTTACTTGGTGGTTGGAGAGAGGACGCCTATCACAGGTCAGTG
CACCATAACCATAGACTCTGTTGCTATCTCTTGGCATGTGTGGTACTTTG
TGAGATTGTACTTCGACAAACTTTTCTGGCACAACGTGTCTTTCTTCCCT
GTAGCTAACAGACAAGACCGTCCTGATCACGGGGTGTGACACCGGCTTCG
GGAACCTCCTGGCCAGGCGGCTGGACCAGCTCGGTCTGCGGGTGTTCGCG
GGCTGTCTGACCGAGGCCGGCGTGGCAGAGTTACGGCAGTCCTGCTCCGA
ACGGCTGCAGCCGATCCAGATGGACGTCACCAGATCAGACAGCGTAGAGG
CTGCGGTCAGGGTGGTGAAGGAGGCTGTGGGGAGTAAAGGTAGGAATGTT
TGGAGCAACTCTAGTGTTTTGTTGTTTTCATATCATACTTTTCGGTCCCC
CAAACTGCACCGGTTTGGAAATGTGATCCTAATGCTGAAATTAGAATGGA
AAATTCAGAATTGAAAAGTACATAGCCCCGAAACTATAGATTAGTATTTA
TTGGATTTTGTGCTGTGTCTTACTTTTCTGTTGCCTGCAAATGAACAATG
TTAGACTTATTTTACATTACAATGTCACTTATGCATGACTGTGTGATTTG
CCATTAAAAAAACGTTTTTTCTAGTTATTGTATATAAGTACTGGTTAGTT
CTGCTAGTTCACTTTAGTGACGCTGAAGAAGAGTGATGGATGTCACTCGA
AACGTCTGGAAATAAATCTCCGAATTTTTATCCAGTTGTAGAGTTTGAAT
TCTCTTCATATAATGTTAGATAATGTTGCAAGTATTGTAAGAACAATCAT
TATGTTAGATAATGTTGAAAGTTTTCTGTACGTTAACGTTCTAGGTTTAT
GGGGGCTGGTGAACAATGCGGGTATTCTCGGTGTTGCGGGGACAATGGCG
TGGGCGACCAAGGATGATTATCAGGTCTGTACTAACAGTATTCTAAATGA
ACAAAGACAAAAACGTAGAAACGATTGTTTAATAAAACCTGGGACTTCTC
TACCATTTATTAGTAAATGGCTGGCGCTTATCAAAGCGAAAAATCTGCCA
ATTTTGTAGTTTAGGTGAAGTAGAAGGAGACCTTCATTTTACGGCAGACT
TTGCATGATAGCGATAGAATCATCATTTTCGGTTATGTGTTAACTAAATT
CCCCCACTTCAGATATTTGAATAGTAAATAAAAAAAACTCTGTTTACAGC
CTTCGATAAACCAACTCTAACTAATCATACAGTCTCCTACATTAATACAA
TTACCAAGAAGCGAGAGGATGCCGAAATACTAAGAGTGAGCTAAACGTTT
TATATGCGAATGAATACGTATATTTAACATGTGAACTGTGCTTAGCCCAG
TGGGGCAAATATGTACAATAAAGTTCTTCATCTATTCATTCATTCATTCA
TTCAAAAATCGAAGACATAGCACGATAGAAGAACCAGCCAACATGAATCA
CCTATCGTCTCATTTTTTAAATTCAAAGTCGAATTCTTTTTGTCTTGTTT
GCATCATCAGGCCGTTTTGAACGTGAACTTGCTCGGGATGATCGACGTCA
CCAACAAATTTCTCCCGCTTCTCAAGAAGTCACGTGGTCGCATCGTGAAC
GTCGCAAGTGTTGCTGGGAGGTTTTCTACAGGGACTGGCGTACCTTACAG
TGTGTCTAAATATGGCGTGGAGGCATTTTCAGACTCTCTGAGGTGAAAAC
TCATTGTCTAAGCTCTGTCTCTATTCTTAGTTAATCTTAAGATTTCAACA
AAGAAAGGCTAATCTTAAAGGTAGACGTTGTGACATTCTGCTAAAGTCAT
TTTGTGCCTTCTGTACGTGTTCTGCAAAAATTTGTTAAAAAGAAAAACAG
AAGATACGGGTCACACAAACATAAGAGTTTCGACATAAAACTATCTACAA
GCCAGGTACATGTATATCTAATTCAATTAAAACATTTTGTATCATCAGAC
GGTCTATGAAATTCTTTGGGGTCAAAGTTCACATCATCGAGCCTGGGTAC
TTCCGGACCGAAATTAGCAATCTGGAGGTCGTCCTGCGTCGTCTGGACCA
CGCCTGGCAACGGCAGAGTTCGGAGACGAAGGCTGAGTACGGAGAGGAGT
TCCTACAAGCCGGTGAGTTGACACCATAATAATGATTATGGAAACTTTGA
AAATTTGTAAATAGTTCAATACTTTCCATTGGAAAGTATTAAACTATTTG
CAGATTTTCTACAAGTCCTCCGGTTTTCATTAAAAACTGAGTACCCGATA
ATTGCAATCGTACCCGTCCGGAAATATGACGTAAGCAACAGGTCAAAGGT
AGTTGGTAGTCTGTAACGTCCCCCGTCCCGGTTCTAGGATGGGTAATGAG
TTCTGAATTATGTTCCGTCAGCTGACCAAACATCATACGAAAAGAGTACT
TGGTTATCGAACACAAGGGAATGACCCATCAGATTTTTTTTCACCCGTGT
CCAAGCTGGCCAACTGTCCTGATGTGTGACGTCATGAGTAGTTATAAGGT
GCCCGGAAGTCGATACCTGCCACCGTCCTGGCTCAACGTGGGTTGATGGG
TTCTGATGTAAATTACCTTTAATAAAACATCATCATGTGTTGAGGTTATG
CATGGTGTGGCATCTCCTACATGTAAACGTTTGTTCTAAATCTTCCCCTC
GAGAACCCAACCATGTGTTGTTACAGGTTTGCGTAGCAAAACCTTTGTTG
GATCCTTTCGCATGTGTGGTGGCCGCCATTTTGAATTGTGACGTCAGAGG
GTCACCATACCATTTTATTGGGAGGGGGTTTTGGGGGGACGCTAGCGTTC
TTTCTATTTTTAACAATTCTGCACACAACTACCACACATTCAACTCAAAT
GAAAAGAGAAATTCAATACCAATTCATATTTATAAAAAGACCCCGTAATC
GCTAAACTAACATAGCAAACCTTAAGTATCAGTGTAGCACACTTATGATG
CAGTTGGTTTCTACTGCATTCAAAAAGAAAAACGATTACAAATATATCAT
CCCCAGTCATACATGTCAACAGAAGATCTTATACTGGAGGTGGATTTATC
GGGAAAAATATATTTTCTATTCACAATGTTTTGTTTTCTTCTTCACAGCA
AAGGACGCTATGGTGGCAAAAGAGCGCTTCAAGCAAGATCCAGCTGCCGT
TGTGGATGCGATGGAGCATGCGCTGTGCGCTACCCGCCCCCGGAGCCGTT
ACGTGGTTGGTTGGGACGCCCGTTTCATGATTATACCGATTTCCTGGCTG
CCCACGGACCTGGGTGACCTAGTCGGAAAGCTTATAGCACCACCGAAAAT
GAGGCCTACGCCGGTCTGTTATAAGGATGGGCAATAG Coding sequence (CDS) from alignment at Sc0000017:3110157..3113593- >transcript:BL95289_evm4 ID=transcript:BL95289_evm4|Name=transcript:BL95289_evm4|organism=Branchiostoma lanceolatum|type=CDS|length=5958bp|location=Sequence derived from alignment at Sc0000017:3110157..3113593- (Branchiostoma lanceolatum)
ATGGAGGTGTTTACGTTACTTGAGGTCATCGCTGTCCTGTGGGTGACGTA
TTTGGTGGTTACTTGGTGGTTGGAGAGAGGACGCCTATCACAGCTAACAG
ACAAGACCGTCCTGATCACGGGGTGTGACACCGGCTTCGGGAACCTCCTG
GCCAGGCGGCTGGACCAGCTCGGTCTGCGGGTGTTCGCGGGCTGTCTGAC
CGAGGCCGGCGTGGCAGAGTTACGGCAGTCCTGCTCCGAACGGCTGCAGC
CGATCCAGATGGACGTCACCAGATCAGACAGCGTAGAGGCTGCGGTCAGG
GTGGTGAAGGAGGCTGTGGGGAGTAAAGGTTTATGGGGGCTGGTGAACAA
TGCGGGTATTCTCGGTGTTGCGGGGACAATGGCGTGGGCGACCAAGGATG
ATTATCAGGCCGTTTTGAACGTGAACTTGCTCGGGATGATCGACGTCACC
AACAAATTTCTCCCGCTTCTCAAGAAGTCACGTGGTCGCATCGTGAACGT
CGCAAGTGTTGCTGGGAGGTTTTCTACAGGGACTGGCGTACCTTACAGTG
TGTCTAAATATGGCGTGGAGGCATTTTCAGACTCTCTGAGACGGTCTATG
AAATTCTTTGGGGTCAAAGTTCACATCATCGAGCCTGGGTACTTCCGGAC
CGAAATTAGCAATCTGGAGGTCGTCCTGCGTCGTCTGGACCACGCCTGGC
AACGGCAGAGTTCGGAGACGAAGGCTGAGTACGGAGAGGAGTTCCTACAA
GCCGCAAAGGACGCTATGGTGGCAAAAGAGCGCTTCAAGCAAGATCCAGC
TGCCGTTGTGGATGCGATGGAGCATGCGCTGTGCGCTACCCGCCCCCGGA
GCCGTTACGTGGTTGGTTGGGACGCCCGTTTCATGATTATACCGATTTCC
TGGCTGCCCACGGACCTGGGTGACCTAGTCGGAAAGCTTATAGCACCACC
GAAAATGAGGCCTACGCCGGTCTGTTATAAGGATGGGCAATAGATGGAGG
TGTTTACGTTACTTGAGGTCATCGCTGTCCTGTGGGTGACGTATTTGGTG
GTTACTTGGTGGTTGGAGAGAGGACGCCTATCACAGCTAACAGACAAGAC
CGTCCTGATCACGGGGTGTGACACCGGCTTCGGGAACCTCCTGGCCAGGC
GGCTGGACCAGCTCGGTCTGCGGGTGTTCGCGGGCTGTCTGACCGAGGCC
GGCGTGGCAGAGTTACGGCAGTCCTGCTCCGAACGGCTGCAGCCGATCCA
GATGGACGTCACCAGATCAGACAGCGTAGAGGCTGCGGTCAGGGTGGTGA
AGGAGGCTGTGGGGAGTAAAGGTTTATGGGGGCTGGTGAACAATGCGGGT
ATTCTCGGTGTTGCGGGGACAATGGCGTGGGCGACCAAGGATGATTATCA
GGCCGTTTTGAACGTGAACTTGCTCGGGATGATCGACGTCACCAACAAAT
TTCTCCCGCTTCTCAAGAAGTCACGTGGTCGCATCGTGAACGTCGCAAGT
GTTGCTGGGAGGTTTTCTACAGGGACTGGCGTACCTTACAGTGTGTCTAA
ATATGGCGTGGAGGCATTTTCAGACTCTCTGAGACGGTCTATGAAATTCT
TTGGGGTCAAAGTTCACATCATCGAGCCTGGGTACTTCCGGACCGAAATT
AGCAATCTGGAGGTCGTCCTGCGTCGTCTGGACCACGCCTGGCAACGGCA
GAGTTCGGAGACGAAGGCTGAGTACGGAGAGGAGTTCCTACAAGCCGCAA
AGGACGCTATGGTGGCAAAAGAGCGCTTCAAGCAAGATCCAGCTGCCGTT
GTGGATGCGATGGAGCATGCGCTGTGCGCTACCCGCCCCCGGAGCCGTTA
CGTGGTTGGTTGGGACGCCCGTTTCATGATTATACCGATTTCCTGGCTGC
CCACGGACCTGGGTGACCTAGTCGGAAAGCTTATAGCACCACCGAAAATG
AGGCCTACGCCGGTCTGTTATAAGGATGGGCAATAGATGGAGGTGTTTAC
GTTACTTGAGGTCATCGCTGTCCTGTGGGTGACGTATTTGGTGGTTACTT
GGTGGTTGGAGAGAGGACGCCTATCACAGCTAACAGACAAGACCGTCCTG
ATCACGGGGTGTGACACCGGCTTCGGGAACCTCCTGGCCAGGCGGCTGGA
CCAGCTCGGTCTGCGGGTGTTCGCGGGCTGTCTGACCGAGGCCGGCGTGG
CAGAGTTACGGCAGTCCTGCTCCGAACGGCTGCAGCCGATCCAGATGGAC
GTCACCAGATCAGACAGCGTAGAGGCTGCGGTCAGGGTGGTGAAGGAGGC
TGTGGGGAGTAAAGGTTTATGGGGGCTGGTGAACAATGCGGGTATTCTCG
GTGTTGCGGGGACAATGGCGTGGGCGACCAAGGATGATTATCAGGCCGTT
TTGAACGTGAACTTGCTCGGGATGATCGACGTCACCAACAAATTTCTCCC
GCTTCTCAAGAAGTCACGTGGTCGCATCGTGAACGTCGCAAGTGTTGCTG
GGAGGTTTTCTACAGGGACTGGCGTACCTTACAGTGTGTCTAAATATGGC
GTGGAGGCATTTTCAGACTCTCTGAGACGGTCTATGAAATTCTTTGGGGT
CAAAGTTCACATCATCGAGCCTGGGTACTTCCGGACCGAAATTAGCAATC
TGGAGGTCGTCCTGCGTCGTCTGGACCACGCCTGGCAACGGCAGAGTTCG
GAGACGAAGGCTGAGTACGGAGAGGAGTTCCTACAAGCCGCAAAGGACGC
TATGGTGGCAAAAGAGCGCTTCAAGCAAGATCCAGCTGCCGTTGTGGATG
CGATGGAGCATGCGCTGTGCGCTACCCGCCCCCGGAGCCGTTACGTGGTT
GGTTGGGACGCCCGTTTCATGATTATACCGATTTCCTGGCTGCCCACGGA
CCTGGGTGACCTAGTCGGAAAGCTTATAGCACCACCGAAAATGAGGCCTA
CGCCGGTCTGTTATAAGGATGGGCAATAGATGGAGGTGTTTACGTTACTT
GAGGTCATCGCTGTCCTGTGGGTGACGTATTTGGTGGTTACTTGGTGGTT
GGAGAGAGGACGCCTATCACAGCTAACAGACAAGACCGTCCTGATCACGG
GGTGTGACACCGGCTTCGGGAACCTCCTGGCCAGGCGGCTGGACCAGCTC
GGTCTGCGGGTGTTCGCGGGCTGTCTGACCGAGGCCGGCGTGGCAGAGTT
ACGGCAGTCCTGCTCCGAACGGCTGCAGCCGATCCAGATGGACGTCACCA
GATCAGACAGCGTAGAGGCTGCGGTCAGGGTGGTGAAGGAGGCTGTGGGG
AGTAAAGGTTTATGGGGGCTGGTGAACAATGCGGGTATTCTCGGTGTTGC
GGGGACAATGGCGTGGGCGACCAAGGATGATTATCAGGCCGTTTTGAACG
TGAACTTGCTCGGGATGATCGACGTCACCAACAAATTTCTCCCGCTTCTC
AAGAAGTCACGTGGTCGCATCGTGAACGTCGCAAGTGTTGCTGGGAGGTT
TTCTACAGGGACTGGCGTACCTTACAGTGTGTCTAAATATGGCGTGGAGG
CATTTTCAGACTCTCTGAGACGGTCTATGAAATTCTTTGGGGTCAAAGTT
CACATCATCGAGCCTGGGTACTTCCGGACCGAAATTAGCAATCTGGAGGT
CGTCCTGCGTCGTCTGGACCACGCCTGGCAACGGCAGAGTTCGGAGACGA
AGGCTGAGTACGGAGAGGAGTTCCTACAAGCCGCAAAGGACGCTATGGTG
GCAAAAGAGCGCTTCAAGCAAGATCCAGCTGCCGTTGTGGATGCGATGGA
GCATGCGCTGTGCGCTACCCGCCCCCGGAGCCGTTACGTGGTTGGTTGGG
ACGCCCGTTTCATGATTATACCGATTTCCTGGCTGCCCACGGACCTGGGT
GACCTAGTCGGAAAGCTTATAGCACCACCGAAAATGAGGCCTACGCCGGT
CTGTTATAAGGATGGGCAATAGATGGAGGTGTTTACGTTACTTGAGGTCA
TCGCTGTCCTGTGGGTGACGTATTTGGTGGTTACTTGGTGGTTGGAGAGA
GGACGCCTATCACAGCTAACAGACAAGACCGTCCTGATCACGGGGTGTGA
CACCGGCTTCGGGAACCTCCTGGCCAGGCGGCTGGACCAGCTCGGTCTGC
GGGTGTTCGCGGGCTGTCTGACCGAGGCCGGCGTGGCAGAGTTACGGCAG
TCCTGCTCCGAACGGCTGCAGCCGATCCAGATGGACGTCACCAGATCAGA
CAGCGTAGAGGCTGCGGTCAGGGTGGTGAAGGAGGCTGTGGGGAGTAAAG
GTTTATGGGGGCTGGTGAACAATGCGGGTATTCTCGGTGTTGCGGGGACA
ATGGCGTGGGCGACCAAGGATGATTATCAGGCCGTTTTGAACGTGAACTT
GCTCGGGATGATCGACGTCACCAACAAATTTCTCCCGCTTCTCAAGAAGT
CACGTGGTCGCATCGTGAACGTCGCAAGTGTTGCTGGGAGGTTTTCTACA
GGGACTGGCGTACCTTACAGTGTGTCTAAATATGGCGTGGAGGCATTTTC
AGACTCTCTGAGACGGTCTATGAAATTCTTTGGGGTCAAAGTTCACATCA
TCGAGCCTGGGTACTTCCGGACCGAAATTAGCAATCTGGAGGTCGTCCTG
CGTCGTCTGGACCACGCCTGGCAACGGCAGAGTTCGGAGACGAAGGCTGA
GTACGGAGAGGAGTTCCTACAAGCCGCAAAGGACGCTATGGTGGCAAAAG
AGCGCTTCAAGCAAGATCCAGCTGCCGTTGTGGATGCGATGGAGCATGCG
CTGTGCGCTACCCGCCCCCGGAGCCGTTACGTGGTTGGTTGGGACGCCCG
TTTCATGATTATACCGATTTCCTGGCTGCCCACGGACCTGGGTGACCTAG
TCGGAAAGCTTATAGCACCACCGAAAATGAGGCCTACGCCGGTCTGTTAT
AAGGATGGGCAATAGATGGAGGTGTTTACGTTACTTGAGGTCATCGCTGT
CCTGTGGGTGACGTATTTGGTGGTTACTTGGTGGTTGGAGAGAGGACGCC
TATCACAGCTAACAGACAAGACCGTCCTGATCACGGGGTGTGACACCGGC
TTCGGGAACCTCCTGGCCAGGCGGCTGGACCAGCTCGGTCTGCGGGTGTT
CGCGGGCTGTCTGACCGAGGCCGGCGTGGCAGAGTTACGGCAGTCCTGCT
CCGAACGGCTGCAGCCGATCCAGATGGACGTCACCAGATCAGACAGCGTA
GAGGCTGCGGTCAGGGTGGTGAAGGAGGCTGTGGGGAGTAAAGGTTTATG
GGGGCTGGTGAACAATGCGGGTATTCTCGGTGTTGCGGGGACAATGGCGT
GGGCGACCAAGGATGATTATCAGGCCGTTTTGAACGTGAACTTGCTCGGG
ATGATCGACGTCACCAACAAATTTCTCCCGCTTCTCAAGAAGTCACGTGG
TCGCATCGTGAACGTCGCAAGTGTTGCTGGGAGGTTTTCTACAGGGACTG
GCGTACCTTACAGTGTGTCTAAATATGGCGTGGAGGCATTTTCAGACTCT
CTGAGACGGTCTATGAAATTCTTTGGGGTCAAAGTTCACATCATCGAGCC
TGGGTACTTCCGGACCGAAATTAGCAATCTGGAGGTCGTCCTGCGTCGTC
TGGACCACGCCTGGCAACGGCAGAGTTCGGAGACGAAGGCTGAGTACGGA
GAGGAGTTCCTACAAGCCGCAAAGGACGCTATGGTGGCAAAAGAGCGCTT
CAAGCAAGATCCAGCTGCCGTTGTGGATGCGATGGAGCATGCGCTGTGCG
CTACCCGCCCCCGGAGCCGTTACGTGGTTGGTTGGGACGCCCGTTTCATG
ATTATACCGATTTCCTGGCTGCCCACGGACCTGGGTGACCTAGTCGGAAA
GCTTATAGCACCACCGAAAATGAGGCCTACGCCGGTCTGTTATAAGGATG
GGCAATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000017 | genome | Sc0000017:3110157..3113593 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95289_evm4 |
| Biotype | protein_coding |
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