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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95344_evm0 >transcript:BL95344_evm0-protein ID=transcript:BL95344_evm0-protein|Name=transcript:BL95344_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=404bp
MALSKPSSTDPVYTPGTDPVYTPGTDPVYTPGTDPVYTPGTDPVYTPGTA
RGAKLAALLVDEGTALVRKIFEEEIENMNSPSLRQQLKRHKRYLCGLRYL
NPGQRKTLYPPGCDVPDTAQRFDISLLELLLKELVWLELKRGAPYSGERD
RLRRFRNDNYGHISSTDLSQKDFDKLWKELSEILVALGGDRDKISERLNS
SIDPEQEVRYFTLLEKLYKEDMEVKDLLLAQGESLRKGQEEVLDQGHSLL
KGQETLLDQGVDVKMGQDRLLARAESLKKGQETLFTQGESQIKGQEKLLD
HLKSLSLAQVRDTQSLVADSGQREDSSPRTGTADLADDVIACLKDLYATE
YAHVRPLPWCEDLNLHLGEVYTSLQLQRRDDKGRFQDKDIKKPCEAWNNC
PGRD Run BLAST on NCBI mRNA from alignment at Sc0000024:1798135..1800655- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95344_evm0 ID=transcript:BL95344_evm0|Name=transcript:BL95344_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2521bp|location=Sequence derived from alignment at Sc0000024:1798135..1800655- (Branchiostoma lanceolatum)
ATGGCCCTGAGTAAGCCCAGCAGCACGGACCCGGTCTACACCCCCGGTAC
GGACCCGGTCTACACCCCCGGTACGGACCCAGTCTACACCCCCGGTACGG
ACCCAGTCTACACCCCCGGTACGGACCCGGTCTACACCCCCGGTACGGCT
CGGGGCGCTAAACTGGCGGCTCTGCTGGTGGACGAGGGGACTGCGCTAGT
CAGGAAAATATTTGAAGAGGAAATCGAGAATATGAACTCTCCAAGTCTTC
GTCAGCAACTGAAAAGGCACAAGAGATATCTTTGTGGACTGCGATACTTG
AACCCGGGTCAAAGGAAAACACTGTATCCACCAGGCTGTGATGTTCCAGA
CACTGCACAGAGGTTTGATATATCACTCTTAGAACTCCTCTTGAAAGAAC
TCGTGTGGTTAGAACTCAAACGGGGGGCACCGTACTCGGGAGAACGGGAC
AGACTTCGGCGGTTTAGAAACGACAATTACGGACACATTTCGAGCACGGA
CCTGTCTCAAAAGGACTTTGACAAACTGTGGAAGGAACTGAGCGAAATCC
TGGTTGCCCTCGGTGGGGACAGAGACAAGATTTCAGAGAGACTCAACTCC
AGCATCGACCCTGAACAGGAAGTAAGATACTTCACCCTGCTAGAGAAACT
GTACAAGGAAGACATGGAGGTCAAAGACCTTCTCTTGGCTCAAGGAGAAA
GTCTAAGAAAAGGGCAAGAAGAAGTTTTGGATCAAGGCCACAGTCTGCTG
AAGGGGCAAGAAACACTCTTGGATCAAGGAGTGGATGTGAAAATGGGGCA
AGACCGACTTTTGGCCCGAGCAGAAAGTCTTAAGAAAGGGCAAGAGACAC
TTTTCACTCAAGGAGAGAGCCAGATCAAAGGGCAAGAAAAACTTTTGGAT
CATTTGAAAAGTCTCTCTCTGGCCCAAGTCCGCGATACCCAGAGCCTAGT
AGCGGACTCGGGACAACGTGAAGATTCAAGTCCCAGAACAGGTAAGGTTT
CTCACAATCGATGTTTGTTTGTTTGTTTATTTGTTTGTTTGTTTGTTATC
TGTACATTTGACGGCCAGACAAACATGTAAACTTGACCTCATACGAGCAC
GTACTAAGCGGTATGCTAACAATCTTCTGCCATACATTGTAAACTCTTGA
ACAACAAAGTGTAACGAAAATATTATGTATGATGTTGATTTTAATGTTTG
TGAGATATGATTTTTTGTATCTTATTATGTATGGGGAATGGTGTACTAAA
TTCCGCAATTCAGCCCTTTTGGGCTGCAAAGAGAGTTCACTCAACAAAAC
CTGTCATAAAAAACAGTCATATAATTTGGAGCATTCTACACTAGACCATG
ATTACTCCGAGTATGTCATCCCTTTCTGGTGGGTTTTGGCAGACTAGGTG
GGGGAAAAGTGAGTGAGTGGAATTGGCTTCATATTCGCAAAATTTGAGCA
ATCCCATAGCTGATAACCCTTTCAATATACAAGAACAAAAGTTGTCAAAA
GTTATCTGCAAAACTAATGATAAAAAATCTGAACACTATACAGGTACTGC
TGATCTGGCTGATGACGTCATCGCCTGTCTGAAGGACCTGTACGCTACAG
AGTATGCGCATGTGCGGCCTCTACCGTGGTGCGAAGACCTCAACCTGCAT
CTTGGAGAAGTCTACACCAGCCTGCAGCTCCAGCGCAGAGACGATAAGGG
GCGCTTTCAGGATAAAGACATCGTAAGCTTAGCAGATATTTACACTACCA
GGGAAGGTGATAATAGTCAAGTTGAGGCAGCTGTCAGAAAGATACGAGTA
GAGGGGGACCCCGGTATTGGGAAGTCGTGCTCTTGTCAGAAACTTGCTTA
TGATTGGTCCTGTGGGAAACTGGATGTTTTTAAGGTTGTCTTCTTTCTGG
AAATGCGACACTTAGCTGGGAAAGTCAAAGATGAAATATTTGAACAGCTC
CTTCCAAAAGATACGAAAACAACCCCGGAACAGCTCTGGTCCTACATCCA
AGAGAACCAGGATGATGTTCTCTTCATCCTAGACGGTCTAGATGAGCTCA
GTCAGACAGCTAGGGAAGTCACAGATGTGGTGGACTTGATTCAGGGTAAA
ATCCTTCGCAAATGTCATGTCCTGGTGACCTCCAGGCCGTACCACTGTGT
CAAAGACCTGGAAAAATGTCACCAGCTCTGCAAAATTGTAGGTTATAGTA
AGGAAAATTCGGAGAAGTTCGTACGCAAATACTTTTGGGATTCTCCAGAG
TCTGCCTCAAAGTTATTGGAAAAGCTTCACAGTAGCAGTTATTTGTCAGA
AATAGTAGTAAATCCTCTCAACAACGTGCTCATTTGTGTTGTGTGGGAAG
ACAACAACAAAGAACTTCCCTCTAGCAAAGCGGAACTATATCGAGATATT
GTTTATTCAGTTTCTCGGCGATTCTGTACTAAGAGAGCCATTCCAGTGGA
AGGTGATAAACTTCCTCCTGACATAGAAGAAGCCTTGCGAGGCCTGGAAC
AACTGTCCTGGGAGGGACTAG Coding sequence (CDS) from alignment at Sc0000024:1798135..1800655- >transcript:BL95344_evm0 ID=transcript:BL95344_evm0|Name=transcript:BL95344_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=3645bp|location=Sequence derived from alignment at Sc0000024:1798135..1800655- (Branchiostoma lanceolatum)
ATGGCCCTGAGTAAGCCCAGCAGCACGGACCCGGTCTACACCCCCGGTAC
GGACCCGGTCTACACCCCCGGTACGGACCCAGTCTACACCCCCGGTACGG
ACCCAGTCTACACCCCCGGTACGGACCCGGTCTACACCCCCGGTACGGCT
CGGGGCGCTAAACTGGCGGCTCTGCTGGTGGACGAGGGGACTGCGCTAGT
CAGGAAAATATTTGAAGAGGAAATCGAGAATATGAACTCTCCAAGTCTTC
GTCAGCAACTGAAAAGGCACAAGAGATATCTTTGTGGACTGCGATACTTG
AACCCGGGTCAAAGGAAAACACTGTATCCACCAGGCTGTGATGTTCCAGA
CACTGCACAGAGGTTTGATATATCACTCTTAGAACTCCTCTTGAAAGAAC
TCGTGTGGTTAGAACTCAAACGGGGGGCACCGTACTCGGGAGAACGGGAC
AGACTTCGGCGGTTTAGAAACGACAATTACGGACACATTTCGAGCACGGA
CCTGTCTCAAAAGGACTTTGACAAACTGTGGAAGGAACTGAGCGAAATCC
TGGTTGCCCTCGGTGGGGACAGAGACAAGATTTCAGAGAGACTCAACTCC
AGCATCGACCCTGAACAGGAAGTAAGATACTTCACCCTGCTAGAGAAACT
GTACAAGGAAGACATGGAGGTCAAAGACCTTCTCTTGGCTCAAGGAGAAA
GTCTAAGAAAAGGGCAAGAAGAAGTTTTGGATCAAGGCCACAGTCTGCTG
AAGGGGCAAGAAACACTCTTGGATCAAGGAGTGGATGTGAAAATGGGGCA
AGACCGACTTTTGGCCCGAGCAGAAAGTCTTAAGAAAGGGCAAGAGACAC
TTTTCACTCAAGGAGAGAGCCAGATCAAAGGGCAAGAAAAACTTTTGGAT
CATTTGAAAAGTCTCTCTCTGGCCCAAGTCCGCGATACCCAGAGCCTAGT
AGCGGACTCGGGACAACGTGAAGATTCAAGTCCCAGAACAGGTACTGCTG
ATCTGGCTGATGACGTCATCGCCTGTCTGAAGGACCTGTACGCTACAGAG
TATGCGCATGTGCGGCCTCTACCGTGGTGCGAAGACCTCAACCTGCATCT
TGGAGAAGTCTACACCAGCCTGCAGCTCCAGCGCAGAGACGATAAGGGGC
GCTTTCAGGATAAAGACATCAAGAAGCCTTGCGAGGCCTGGAACAACTGT
CCTGGGAGGGACTAGATGGCCCTGAGTAAGCCCAGCAGCACGGACCCGGT
CTACACCCCCGGTACGGACCCGGTCTACACCCCCGGTACGGACCCAGTCT
ACACCCCCGGTACGGACCCAGTCTACACCCCCGGTACGGACCCGGTCTAC
ACCCCCGGTACGGCTCGGGGCGCTAAACTGGCGGCTCTGCTGGTGGACGA
GGGGACTGCGCTAGTCAGGAAAATATTTGAAGAGGAAATCGAGAATATGA
ACTCTCCAAGTCTTCGTCAGCAACTGAAAAGGCACAAGAGATATCTTTGT
GGACTGCGATACTTGAACCCGGGTCAAAGGAAAACACTGTATCCACCAGG
CTGTGATGTTCCAGACACTGCACAGAGGTTTGATATATCACTCTTAGAAC
TCCTCTTGAAAGAACTCGTGTGGTTAGAACTCAAACGGGGGGCACCGTAC
TCGGGAGAACGGGACAGACTTCGGCGGTTTAGAAACGACAATTACGGACA
CATTTCGAGCACGGACCTGTCTCAAAAGGACTTTGACAAACTGTGGAAGG
AACTGAGCGAAATCCTGGTTGCCCTCGGTGGGGACAGAGACAAGATTTCA
GAGAGACTCAACTCCAGCATCGACCCTGAACAGGAAGTAAGATACTTCAC
CCTGCTAGAGAAACTGTACAAGGAAGACATGGAGGTCAAAGACCTTCTCT
TGGCTCAAGGAGAAAGTCTAAGAAAAGGGCAAGAAGAAGTTTTGGATCAA
GGCCACAGTCTGCTGAAGGGGCAAGAAACACTCTTGGATCAAGGAGTGGA
TGTGAAAATGGGGCAAGACCGACTTTTGGCCCGAGCAGAAAGTCTTAAGA
AAGGGCAAGAGACACTTTTCACTCAAGGAGAGAGCCAGATCAAAGGGCAA
GAAAAACTTTTGGATCATTTGAAAAGTCTCTCTCTGGCCCAAGTCCGCGA
TACCCAGAGCCTAGTAGCGGACTCGGGACAACGTGAAGATTCAAGTCCCA
GAACAGGTACTGCTGATCTGGCTGATGACGTCATCGCCTGTCTGAAGGAC
CTGTACGCTACAGAGTATGCGCATGTGCGGCCTCTACCGTGGTGCGAAGA
CCTCAACCTGCATCTTGGAGAAGTCTACACCAGCCTGCAGCTCCAGCGCA
GAGACGATAAGGGGCGCTTTCAGGATAAAGACATCAAGAAGCCTTGCGAG
GCCTGGAACAACTGTCCTGGGAGGGACTAGATGGCCCTGAGTAAGCCCAG
CAGCACGGACCCGGTCTACACCCCCGGTACGGACCCGGTCTACACCCCCG
GTACGGACCCAGTCTACACCCCCGGTACGGACCCAGTCTACACCCCCGGT
ACGGACCCGGTCTACACCCCCGGTACGGCTCGGGGCGCTAAACTGGCGGC
TCTGCTGGTGGACGAGGGGACTGCGCTAGTCAGGAAAATATTTGAAGAGG
AAATCGAGAATATGAACTCTCCAAGTCTTCGTCAGCAACTGAAAAGGCAC
AAGAGATATCTTTGTGGACTGCGATACTTGAACCCGGGTCAAAGGAAAAC
ACTGTATCCACCAGGCTGTGATGTTCCAGACACTGCACAGAGGTTTGATA
TATCACTCTTAGAACTCCTCTTGAAAGAACTCGTGTGGTTAGAACTCAAA
CGGGGGGCACCGTACTCGGGAGAACGGGACAGACTTCGGCGGTTTAGAAA
CGACAATTACGGACACATTTCGAGCACGGACCTGTCTCAAAAGGACTTTG
ACAAACTGTGGAAGGAACTGAGCGAAATCCTGGTTGCCCTCGGTGGGGAC
AGAGACAAGATTTCAGAGAGACTCAACTCCAGCATCGACCCTGAACAGGA
AGTAAGATACTTCACCCTGCTAGAGAAACTGTACAAGGAAGACATGGAGG
TCAAAGACCTTCTCTTGGCTCAAGGAGAAAGTCTAAGAAAAGGGCAAGAA
GAAGTTTTGGATCAAGGCCACAGTCTGCTGAAGGGGCAAGAAACACTCTT
GGATCAAGGAGTGGATGTGAAAATGGGGCAAGACCGACTTTTGGCCCGAG
CAGAAAGTCTTAAGAAAGGGCAAGAGACACTTTTCACTCAAGGAGAGAGC
CAGATCAAAGGGCAAGAAAAACTTTTGGATCATTTGAAAAGTCTCTCTCT
GGCCCAAGTCCGCGATACCCAGAGCCTAGTAGCGGACTCGGGACAACGTG
AAGATTCAAGTCCCAGAACAGGTACTGCTGATCTGGCTGATGACGTCATC
GCCTGTCTGAAGGACCTGTACGCTACAGAGTATGCGCATGTGCGGCCTCT
ACCGTGGTGCGAAGACCTCAACCTGCATCTTGGAGAAGTCTACACCAGCC
TGCAGCTCCAGCGCAGAGACGATAAGGGGCGCTTTCAGGATAAAGACATC
AAGAAGCCTTGCGAGGCCTGGAACAACTGTCCTGGGAGGGACTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000024 | genome | Sc0000024:1798135..1800655 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95344_evm0 |
| Biotype | protein_coding |
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