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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95379_evm2 >transcript:BL95379_evm2-protein ID=transcript:BL95379_evm2-protein|Name=transcript:BL95379_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=301bp
MKQVTDPNYTQFVVINPEREYRQGDVLTAVIMARDAEGRPKTYGGDFFRA
KLVSVRPMEASSAGHVTDHGNGTYTVQFPLYWAGGVKASIQLVHPSEAVK
VLQRVRAVPNKRIFFCSFVDAEAKIIVRRRCFSSKPASLLPHQLCDFSRG
DENGRWFCKRPPSPLSCSRISKCWWEGNRTYDQVPSLVSQTERKLFESPF
LEEELKQDVPRLRIRVKPSGQSSVHRLPKCSENTPDVLSRGYWSRNVWKP
SVCRVRLFGRKDVQRCLAKKEVYLQGDSTLRQWYLRLGKLVPLHSHGDSR
A Run BLAST on NCBI mRNA from alignment at Sc0000033:368735..370302+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95379_evm2 ID=transcript:BL95379_evm2|Name=transcript:BL95379_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=1568bp|location=Sequence derived from alignment at Sc0000033:368735..370302+ (Branchiostoma lanceolatum)
ATGAAGCAAGTCACGGACCCAAACTACACACAGTTTGTCGTGATCAACCC
AGAGCGGGAGTACCGACAAGGAGACGTCCTTACTGCCGTCATAATGGCGA
GGGACGCCGAAGGAAGGCCCAAGACGTACGGAGGAGATTTCTTCCGCGCC
AAGCTCGTCAGTGTGCGGCCCATGGAGGCGAGCAGCGCTGGGCACGTGAC
CGACCATGGCAACGGCACTTACACTGTGCAGTTCCCGCTGTACTGGGCAG
GGGGCGTTAAGGTGAGTTAAGATCATCAGAGAAAATCATCAAATGGTTTT
CATACATGTGGCTATGATATTTTTACTCATGTGGCTAGGACGTAAGTATG
AGCTAGTTCACGATTTGAATTGCGCATGCGCAGAGCGATACATTGCGCGC
TGTATGTCTAAGTTGAAGGCCCCTGGCCGTTCTTTATGTATTGTAAGGGG
CCTTGAACTTTGACAAATTACCCACAGTGCATCAAGTTTTGCATAACGCA
CTTCAAACCATGACCCTGCTTATTGTCCGTTTTTCTATGTAGTGATTACC
CATTTGTATGATCCTCAAAAGAAAAGTTTCTCAAGGAACTGGATAAGATT
GACCTTTTACAAAACTTATATCCAGTTGCTTAAGTAACTTTTGTATTGAG
CATCTCATTACCTGTATTTGTAATCTTAATTGCCATTTTTGTGTGCTTAA
TTTTAGGCGTCGATCCAACTTGTCCACCCTAGCGAAGCAGTGAAGGTACT
GCAGCGCGTGCGAGCGGTCCCAAACAAGAGAATCTTCTTCTGCTCCTTCG
TTGACGCCGAGGCAAAGATCATCGTGAGGCGCCGGTGCTTTAGCTCCAAA
CCAGCAAGCCTACTACCTCACCAATTATGTGATTTTTCCAGAGGTGACGA
GAACGGACGCTGGTTTTGTAAACGACCACCCTCCCCCCTCTCCTGCTCGA
GAATCTCGAAGTGCTGGTGGGAGGGAAATAGGACCTATGATCAGGTCCCA
AGTCTCGTGTCTCAGACTGAAAGGAAACTCTTCGAAAGGTATCATTCACG
ATGTCGTTCTTATCTTTGCTGAAATCTTTGGTATTATAACATTCCAAGTA
TGAAGATAACAATGGCTTTCATCTGAGTAGTAAATACATCAAAACAGGGC
AAATTGAATGTCTTTAACCTTTCTAAGATATACGTTTTATTCAAGGTTCT
TTATTTTCACCTCGATCTATATGTCTACATGTCAACATAACACTTTTCAT
ACCACAGTCCCTTCTTAGAGGAAGAGCTGAAACAAGACGTTCCAAGACTC
CGCATACGTGTCAAGCCATCAGGGCAGTCTTCTGTTCACCGTCTTCCCAA
GTGCTCTGAGAACACACCTGACGTCTTAAGCCGAGGCTACTGGTCCAGAA
ATGTCTGGAAGCCCTCGGTCTGTAGAGTGAGGCTGTTTGGAAGGAAGGAC
GTGCAAAGGTGTCTTGCCAAGAAGGAAGTTTATCTGCAGGGAGATTCAAC
CCTCCGACAGTGGTACCTCCGGTTGGGGAAACTTGTACCACTGCACAGTC
ATGGGGACAGTCGTGCAG Coding sequence (CDS) from alignment at Sc0000033:368735..370302+ >transcript:BL95379_evm2 ID=transcript:BL95379_evm2|Name=transcript:BL95379_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=2712bp|location=Sequence derived from alignment at Sc0000033:368735..370302+ (Branchiostoma lanceolatum)
ATGAAGCAAGTCACGGACCCAAACTACACACAGTTTGTCGTGATCAACCC
AGAGCGGGAGTACCGACAAGGAGACGTCCTTACTGCCGTCATAATGGCGA
GGGACGCCGAAGGAAGGCCCAAGACGTACGGAGGAGATTTCTTCCGCGCC
AAGCTCGTCAGTGTGCGGCCCATGGAGGCGAGCAGCGCTGGGCACGTGAC
CGACCATGGCAACGGCACTTACACTGTGCAGTTCCCGCTGTACTGGGCAG
GGGGCGTTAAGGCGTCGATCCAACTTGTCCACCCTAGCGAAGCAGTGAAG
GTACTGCAGCGCGTGCGAGCGGTCCCAAACAAGAGAATCTTCTTCTGCTC
CTTCGTTGACGCCGAGGCAAAGATCATCGTGAGGCGCCGGTGCTTTAGCT
CCAAACCAGCAAGCCTACTACCTCACCAATTATGTGATTTTTCCAGAGGT
GACGAGAACGGACGCTGGTTTTGTAAACGACCACCCTCCCCCCTCTCCTG
CTCGAGAATCTCGAAGTGCTGGTGGGAGGGAAATAGGACCTATGATCAGG
TCCCAAGTCTCGTGTCTCAGACTGAAAGGAAACTCTTCGAAAGTCCCTTC
TTAGAGGAAGAGCTGAAACAAGACGTTCCAAGACTCCGCATACGTGTCAA
GCCATCAGGGCAGTCTTCTGTTCACCGTCTTCCCAAGTGCTCTGAGAACA
CACCTGACGTCTTAAGCCGAGGCTACTGGTCCAGAAATGTCTGGAAGCCC
TCGGTCTGTAGAGTGAGGCTGTTTGGAAGGAAGGACGTGCAAAGGTGTCT
TGCCAAGAAGGAAGTTTATCTGCAGGGAGATTCAACCCTCCGACAGTGGT
ACCTCCGGTTGGGGAAACTTGTACCACTGCACAGTCATGGGGACAGTCGT
GCAGATGAAGCAAGTCACGGACCCAAACTACACACAGTTTGTCGTGATCA
ACCCAGAGCGGGAGTACCGACAAGGAGACGTCCTTACTGCCGTCATAATG
GCGAGGGACGCCGAAGGAAGGCCCAAGACGTACGGAGGAGATTTCTTCCG
CGCCAAGCTCGTCAGTGTGCGGCCCATGGAGGCGAGCAGCGCTGGGCACG
TGACCGACCATGGCAACGGCACTTACACTGTGCAGTTCCCGCTGTACTGG
GCAGGGGGCGTTAAGGCGTCGATCCAACTTGTCCACCCTAGCGAAGCAGT
GAAGGTACTGCAGCGCGTGCGAGCGGTCCCAAACAAGAGAATCTTCTTCT
GCTCCTTCGTTGACGCCGAGGCAAAGATCATCGTGAGGCGCCGGTGCTTT
AGCTCCAAACCAGCAAGCCTACTACCTCACCAATTATGTGATTTTTCCAG
AGGTGACGAGAACGGACGCTGGTTTTGTAAACGACCACCCTCCCCCCTCT
CCTGCTCGAGAATCTCGAAGTGCTGGTGGGAGGGAAATAGGACCTATGAT
CAGGTCCCAAGTCTCGTGTCTCAGACTGAAAGGAAACTCTTCGAAAGTCC
CTTCTTAGAGGAAGAGCTGAAACAAGACGTTCCAAGACTCCGCATACGTG
TCAAGCCATCAGGGCAGTCTTCTGTTCACCGTCTTCCCAAGTGCTCTGAG
AACACACCTGACGTCTTAAGCCGAGGCTACTGGTCCAGAAATGTCTGGAA
GCCCTCGGTCTGTAGAGTGAGGCTGTTTGGAAGGAAGGACGTGCAAAGGT
GTCTTGCCAAGAAGGAAGTTTATCTGCAGGGAGATTCAACCCTCCGACAG
TGGTACCTCCGGTTGGGGAAACTTGTACCACTGCACAGTCATGGGGACAG
TCGTGCAGATGAAGCAAGTCACGGACCCAAACTACACACAGTTTGTCGTG
ATCAACCCAGAGCGGGAGTACCGACAAGGAGACGTCCTTACTGCCGTCAT
AATGGCGAGGGACGCCGAAGGAAGGCCCAAGACGTACGGAGGAGATTTCT
TCCGCGCCAAGCTCGTCAGTGTGCGGCCCATGGAGGCGAGCAGCGCTGGG
CACGTGACCGACCATGGCAACGGCACTTACACTGTGCAGTTCCCGCTGTA
CTGGGCAGGGGGCGTTAAGGCGTCGATCCAACTTGTCCACCCTAGCGAAG
CAGTGAAGGTACTGCAGCGCGTGCGAGCGGTCCCAAACAAGAGAATCTTC
TTCTGCTCCTTCGTTGACGCCGAGGCAAAGATCATCGTGAGGCGCCGGTG
CTTTAGCTCCAAACCAGCAAGCCTACTACCTCACCAATTATGTGATTTTT
CCAGAGGTGACGAGAACGGACGCTGGTTTTGTAAACGACCACCCTCCCCC
CTCTCCTGCTCGAGAATCTCGAAGTGCTGGTGGGAGGGAAATAGGACCTA
TGATCAGGTCCCAAGTCTCGTGTCTCAGACTGAAAGGAAACTCTTCGAAA
GTCCCTTCTTAGAGGAAGAGCTGAAACAAGACGTTCCAAGACTCCGCATA
CGTGTCAAGCCATCAGGGCAGTCTTCTGTTCACCGTCTTCCCAAGTGCTC
TGAGAACACACCTGACGTCTTAAGCCGAGGCTACTGGTCCAGAAATGTCT
GGAAGCCCTCGGTCTGTAGAGTGAGGCTGTTTGGAAGGAAGGACGTGCAA
AGGTGTCTTGCCAAGAAGGAAGTTTATCTGCAGGGAGATTCAACCCTCCG
ACAGTGGTACCTCCGGTTGGGGAAACTTGTACCACTGCACAGTCATGGGG
ACAGTCGTGCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000033 | genome | Sc0000033:368735..370302 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95379_evm2 |
| Biotype | protein_coding |
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