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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95383_evm1 >transcript:BL95383_evm1-protein ID=transcript:BL95383_evm1-protein|Name=transcript:BL95383_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=292bp
MPLLRISSFTTALNLGDIFLVTAMSINMGDELTHLTLEKDDQPANKYETY
VMPCIAEFXYVMPCIAEFVGLVIFVFIGTMVTGHTAAGNLWLISIALAHG
LTIALLIVSIGHISGGHLNPAVTLGITIAGGVTVLQGICYVISQLLGAMV
GAAFTRAILPNTTYAACSGGAHAMGGGVSITGAIVCESLLTMILVLTVLL
SAVDSSTTGKALPPLAIGLAVLVGILAGGPFSGASMNPARAFGPAVAAGV
WKNHYVWWVGPVIGALVAGFIYRVFLASADRRLIAGNRNKYY Run BLAST on NCBI mRNA from alignment at Sc0000033:1777797..1781223+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95383_evm1 ID=transcript:BL95383_evm1|Name=transcript:BL95383_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3427bp|location=Sequence derived from alignment at Sc0000033:1777797..1781223+ (Branchiostoma lanceolatum)
ATGCCTCTTCTGAGAATCTCTTCCTTCACTACAGCGCTGAATCTAGGCGA
CATCTTCTTGGTTACAGCCATGTCCATCAACATGGGTGACGAGCTGACCC
ACTTGACGCTGGAGAAGGACGACCAGCCGGCCAACAAGTACGAGACTTAC
GTCATGCCTTGTATCGCCGAGTTCGNTTACGTCATGCCATGTATCGCCGA
GTTCGTCGGACTCGTCATCTTCGTCTTCATCGGCACCATGGTAACAGGTG
GGTGAGGTGTCGTGTGCAAAAGTTAGCTTTGGTGATAGGTTAGTGAAGTG
TCGTGTGCAAAATTTAGCTTTTGTGACGGGGTTGTAAAAGGTCGTGTTAT
ACCATTAGTTTCGGTGACAGGTTATTGAAGTTACGTGTACAATAGTTAGC
GTTGGCATGGTGACAGGTCTGCAGAAAATAGCTCTGGTGACAGGTTAGCG
ACGTGTCGTTTGCAAAAAGTAGAGTTGGTGACATGTTAGCAAAGTGCCTT
GTGCAAAAATTAGCTATGGTGACAGGCAGGGACGTTCGATAAGGATACGT
TCGGTCGAATTCGTCGTACGATAGGTCTTTGTCAGTCTCGGATGCGTCGC
ACCAAACTCAGCTGTCTTGTGATGGTTGAGAGGTTGCCATAGATTTTTGT
CAGCGGTTGGTTTTGACATGGTTTCTAAGAAAATCCTACACGAACGACAA
ACAGATATGACAACGGGTTAGGGCTTAACTTAATGTAACAAATTCCTGGC
TCCAAATGATTTTCTCCGTCGAGAAAAATGCCCCTGTATTTCCCAAACTC
AAGAATGTTTAGTTTGAACACAGCTTGTCAAAGGTTGTACGCTGAATGTT
TGTTCTATCTTGGCAGGTCACACAGCTGCAGGAAACCTGTGGTTAATCTC
CATCGCCTTGGCGCACGGGCTCACCATAGCCTTGCTTATCGTCTCTATCG
GACACATCAGGTACGGTTATATAAAGCAGATATTATACAATAGAAGACAT
GAGTTTTGATAAGAATAGGATCATTGCAAAAACGTGACTGCTACAGCTGT
ACAATAAACAGATGATCAACTACCAAGACCGGTTCGTCGATAAAGTTGAT
TCCAGTCTTCATAACTGTACCGAAGAATTGCTTTTGGACGTTCCTTTTGA
CAAGAAATCATATCTAAAGATAAGCATGATTCGCTCATCTTTGTCTCTGA
AGATATCGATGTTGGATAAGACCTTATTATATAACTTCCCTCTGCATCCC
AGTGGTGGTCACCTGAATCCAGCTGTCACCTTGGGCATCACCATTGCCGG
TGGGGTCACTGTTCTACAGGGCATTTGTTACGTCATCAGTCAGCTGCTGG
GGGCCATGGTGGGAGCGGCATTTACCAGGGTAATGTATCATTGTGTACTG
TAAAATTAAACAGTACTTCGTGGAAATGGTCGTTAGTACTGTTTCTCGTA
TGTCTTGTTTAATTTTAGTTCGCTATCATACAAATGATATTTTGATTGAC
ATTACAAGTGCCCTGCACTCTACGGTGAATGTGACTAGCATTTGAAAAAT
ATCTAAATGCGAAAACACAAACAAACAGACCGAAAACAATACCTTTCAGT
GAATTAGTAGCCTTTTCCGTTGACTCTATGACCTGGAATATATGCGTTGT
CCGATAAATGACAAGTTCTGCCACCTCTGACGTTTGCGGGGACACCATCT
TCTCACTCACCTCCTGCTACTCTAGTAGCAGTGCATTCCACTAACTAGAG
ACACACAAGAACACAAATATCCAAATACTCCAAATACAATATCTCTGTCC
AGAGGCAATAAACACCATTTACCAGCTATCGTCTGCACCGCTCAGGCCAT
CCTACCGAACACAACGTACGCTGCCTGCTCCGGAGGGGCGCACGCCATGG
GCGGAGGGGTGTCCATCACTGGAGCCATCGTGTGCGAGTCCCTCCTCACC
ATGATCCTGGTCCTCACCGTGCTGCTGTCGGCCGTGGACTCGTCCACCAC
CGGCAAGGCCCTGCCTCCTCTCGCCATCGGCCTGGCCGTGCTGGTTGGCA
TTCTCGCAGGGTGAGTACTAGTACTTGTCTCGTTGATGAAGGTTAGACAT
CCAGGTAATAAGATGGCTCTGCTAAAACGGGCTGAAGTTTCCACTTTTGT
TGCGTTGCCTCTAACCAGTTCTCAAACAATCAGAGAATCTGCTTAATCAA
CACTTTTGTAATTTTCTGACACGCTGACAGTTTGTAAGAGGCCACTAGAA
CCTTGTTTAGGCCGCGGGCAAGGCTCTCCGAAAGATCTAGGAGAATACGT
TAACCAAACATTCCATACAGTTGTGATAACAAACCTAAATCTTGTATGAT
GCCTGAACAACTCTTCCCTTTGTGATTGTTATTCTGAGAACGAGGAACAA
AGGGAATCTAATCATTCAAAAAACGAGAAGCTGAAGTAACCCAAATTGTT
ATCGTTGATAACTGATTGTCATCACCATATAACAGCGGCCCGTTCTCCGG
AGCGTCCATGAACCCAGCCCGTGCGTTCGGCCCGGCGGTCGCGGCTGGAG
TGTGGAAGAACCACTATGTCTGGTGGGTGGGACCGGTCATAGGCGCTCTC
GTGGCTGGATTTATCTACAGGTAAGGTTGAGTAACTTATCTATCGAAAAT
AAAACAGCAAAATGAATGTAGGAAAAAAAAAGAGAAATGTCAGGTGTTTT
TGTGTGATGTTTTTCGTTTTCTCTTATCATCAGTTTTAGTCTCAGAGCAA
TCTCCGATGTGCATGCTCAAATCTGGAATCTGGGGAAAAACCTTCAACAC
AGTCTGAAATGTATCAGATACATGTACTAAACTATATCATGCAGTTCGTA
ATTTCCGGCATTTCCTGGCCTGGATGCTAAATACGATGCTGTTATACAGT
TGACGTTGTTACTGTTTGTATGAACGCATACTGGTTATCAAGCATGAGAA
TACGACATTCTCCTACGCAGACACTCTGCTTAATCGGGCTGAGGTTTTCA
CTTTTGAGAGCATGGCCTCTACCCAGCTGTCAGCTTCTCAGAGAATAGGC
TTCACCCTAATAATATATATAGGTGATTCTCTGATTGCCTGGCAGCTGGT
TAGAGGCCACGTCCAACAAAAGTGGAAACCTCAGCCTGGTTTACCATCGA
TATCCTCAAGGAATATTGTATACGCCGCGGGTCAGGCTCTGCGTAGGAGA
ATGTAGTACTGTATTCTGATGCTTGATGCCAGTTTACCACCCTCAAGGAA
TATTGTATAGGCCTCGGGCGAGGATATACACACTTAGTAGAATGAAAGAA
TATGTAGAGTGTTAAGTGGTGAAATGTTGAATGCAGAAACCTGATAGAAT
TCGTTCTTCCCTTCAGGGTGTTCCTGGCCAGTGCGGATCGCCGGCTGATC
GCGGGGAACAGGAATAAATATTACTGA Coding sequence (CDS) from alignment at Sc0000033:1777797..1781223+ >transcript:BL95383_evm1 ID=transcript:BL95383_evm1|Name=transcript:BL95383_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=5274bp|location=Sequence derived from alignment at Sc0000033:1777797..1781223+ (Branchiostoma lanceolatum)
ATGCCTCTTCTGAGAATCTCTTCCTTCACTACAGCGCTGAATCTAGGCGA
CATCTTCTTGGTTACAGCCATGTCCATCAACATGGGTGACGAGCTGACCC
ACTTGACGCTGGAGAAGGACGACCAGCCGGCCAACAAGTACGAGACTTAC
GTCATGCCTTGTATCGCCGAGTTCGNTTACGTCATGCCATGTATCGCCGA
GTTCGTCGGACTCGTCATCTTCGTCTTCATCGGCACCATGGTAACAGGTC
ACACAGCTGCAGGAAACCTGTGGTTAATCTCCATCGCCTTGGCGCACGGG
CTCACCATAGCCTTGCTTATCGTCTCTATCGGACACATCAGTGGTGGTCA
CCTGAATCCAGCTGTCACCTTGGGCATCACCATTGCCGGTGGGGTCACTG
TTCTACAGGGCATTTGTTACGTCATCAGTCAGCTGCTGGGGGCCATGGTG
GGAGCGGCATTTACCAGGGCCATCCTACCGAACACAACGTACGCTGCCTG
CTCCGGAGGGGCGCACGCCATGGGCGGAGGGGTGTCCATCACTGGAGCCA
TCGTGTGCGAGTCCCTCCTCACCATGATCCTGGTCCTCACCGTGCTGCTG
TCGGCCGTGGACTCGTCCACCACCGGCAAGGCCCTGCCTCCTCTCGCCAT
CGGCCTGGCCGTGCTGGTTGGCATTCTCGCAGGCGGCCCGTTCTCCGGAG
CGTCCATGAACCCAGCCCGTGCGTTCGGCCCGGCGGTCGCGGCTGGAGTG
TGGAAGAACCACTATGTCTGGTGGGTGGGACCGGTCATAGGCGCTCTCGT
GGCTGGATTTATCTACAGGGTGTTCCTGGCCAGTGCGGATCGCCGGCTGA
TCGCGGGGAACAGGAATAAATATTACTGAATGCCTCTTCTGAGAATCTCT
TCCTTCACTACAGCGCTGAATCTAGGCGACATCTTCTTGGTTACAGCCAT
GTCCATCAACATGGGTGACGAGCTGACCCACTTGACGCTGGAGAAGGACG
ACCAGCCGGCCAACAAGTACGAGACTTACGTCATGCCTTGTATCGCCGAG
TTCGNTTACGTCATGCCATGTATCGCCGAGTTCGTCGGACTCGTCATCTT
CGTCTTCATCGGCACCATGGTAACAGGTCACACAGCTGCAGGAAACCTGT
GGTTAATCTCCATCGCCTTGGCGCACGGGCTCACCATAGCCTTGCTTATC
GTCTCTATCGGACACATCAGTGGTGGTCACCTGAATCCAGCTGTCACCTT
GGGCATCACCATTGCCGGTGGGGTCACTGTTCTACAGGGCATTTGTTACG
TCATCAGTCAGCTGCTGGGGGCCATGGTGGGAGCGGCATTTACCAGGGCC
ATCCTACCGAACACAACGTACGCTGCCTGCTCCGGAGGGGCGCACGCCAT
GGGCGGAGGGGTGTCCATCACTGGAGCCATCGTGTGCGAGTCCCTCCTCA
CCATGATCCTGGTCCTCACCGTGCTGCTGTCGGCCGTGGACTCGTCCACC
ACCGGCAAGGCCCTGCCTCCTCTCGCCATCGGCCTGGCCGTGCTGGTTGG
CATTCTCGCAGGCGGCCCGTTCTCCGGAGCGTCCATGAACCCAGCCCGTG
CGTTCGGCCCGGCGGTCGCGGCTGGAGTGTGGAAGAACCACTATGTCTGG
TGGGTGGGACCGGTCATAGGCGCTCTCGTGGCTGGATTTATCTACAGGGT
GTTCCTGGCCAGTGCGGATCGCCGGCTGATCGCGGGGAACAGGAATAAAT
ATTACTGAATGCCTCTTCTGAGAATCTCTTCCTTCACTACAGCGCTGAAT
CTAGGCGACATCTTCTTGGTTACAGCCATGTCCATCAACATGGGTGACGA
GCTGACCCACTTGACGCTGGAGAAGGACGACCAGCCGGCCAACAAGTACG
AGACTTACGTCATGCCTTGTATCGCCGAGTTCGNTTACGTCATGCCATGT
ATCGCCGAGTTCGTCGGACTCGTCATCTTCGTCTTCATCGGCACCATGGT
AACAGGTCACACAGCTGCAGGAAACCTGTGGTTAATCTCCATCGCCTTGG
CGCACGGGCTCACCATAGCCTTGCTTATCGTCTCTATCGGACACATCAGT
GGTGGTCACCTGAATCCAGCTGTCACCTTGGGCATCACCATTGCCGGTGG
GGTCACTGTTCTACAGGGCATTTGTTACGTCATCAGTCAGCTGCTGGGGG
CCATGGTGGGAGCGGCATTTACCAGGGCCATCCTACCGAACACAACGTAC
GCTGCCTGCTCCGGAGGGGCGCACGCCATGGGCGGAGGGGTGTCCATCAC
TGGAGCCATCGTGTGCGAGTCCCTCCTCACCATGATCCTGGTCCTCACCG
TGCTGCTGTCGGCCGTGGACTCGTCCACCACCGGCAAGGCCCTGCCTCCT
CTCGCCATCGGCCTGGCCGTGCTGGTTGGCATTCTCGCAGGCGGCCCGTT
CTCCGGAGCGTCCATGAACCCAGCCCGTGCGTTCGGCCCGGCGGTCGCGG
CTGGAGTGTGGAAGAACCACTATGTCTGGTGGGTGGGACCGGTCATAGGC
GCTCTCGTGGCTGGATTTATCTACAGGGTGTTCCTGGCCAGTGCGGATCG
CCGGCTGATCGCGGGGAACAGGAATAAATATTACTGAATGCCTCTTCTGA
GAATCTCTTCCTTCACTACAGCGCTGAATCTAGGCGACATCTTCTTGGTT
ACAGCCATGTCCATCAACATGGGTGACGAGCTGACCCACTTGACGCTGGA
GAAGGACGACCAGCCGGCCAACAAGTACGAGACTTACGTCATGCCTTGTA
TCGCCGAGTTCGNTTACGTCATGCCATGTATCGCCGAGTTCGTCGGACTC
GTCATCTTCGTCTTCATCGGCACCATGGTAACAGGTCACACAGCTGCAGG
AAACCTGTGGTTAATCTCCATCGCCTTGGCGCACGGGCTCACCATAGCCT
TGCTTATCGTCTCTATCGGACACATCAGTGGTGGTCACCTGAATCCAGCT
GTCACCTTGGGCATCACCATTGCCGGTGGGGTCACTGTTCTACAGGGCAT
TTGTTACGTCATCAGTCAGCTGCTGGGGGCCATGGTGGGAGCGGCATTTA
CCAGGGCCATCCTACCGAACACAACGTACGCTGCCTGCTCCGGAGGGGCG
CACGCCATGGGCGGAGGGGTGTCCATCACTGGAGCCATCGTGTGCGAGTC
CCTCCTCACCATGATCCTGGTCCTCACCGTGCTGCTGTCGGCCGTGGACT
CGTCCACCACCGGCAAGGCCCTGCCTCCTCTCGCCATCGGCCTGGCCGTG
CTGGTTGGCATTCTCGCAGGCGGCCCGTTCTCCGGAGCGTCCATGAACCC
AGCCCGTGCGTTCGGCCCGGCGGTCGCGGCTGGAGTGTGGAAGAACCACT
ATGTCTGGTGGGTGGGACCGGTCATAGGCGCTCTCGTGGCTGGATTTATC
TACAGGGTGTTCCTGGCCAGTGCGGATCGCCGGCTGATCGCGGGGAACAG
GAATAAATATTACTGAATGCCTCTTCTGAGAATCTCTTCCTTCACTACAG
CGCTGAATCTAGGCGACATCTTCTTGGTTACAGCCATGTCCATCAACATG
GGTGACGAGCTGACCCACTTGACGCTGGAGAAGGACGACCAGCCGGCCAA
CAAGTACGAGACTTACGTCATGCCTTGTATCGCCGAGTTCGNTTACGTCA
TGCCATGTATCGCCGAGTTCGTCGGACTCGTCATCTTCGTCTTCATCGGC
ACCATGGTAACAGGTCACACAGCTGCAGGAAACCTGTGGTTAATCTCCAT
CGCCTTGGCGCACGGGCTCACCATAGCCTTGCTTATCGTCTCTATCGGAC
ACATCAGTGGTGGTCACCTGAATCCAGCTGTCACCTTGGGCATCACCATT
GCCGGTGGGGTCACTGTTCTACAGGGCATTTGTTACGTCATCAGTCAGCT
GCTGGGGGCCATGGTGGGAGCGGCATTTACCAGGGCCATCCTACCGAACA
CAACGTACGCTGCCTGCTCCGGAGGGGCGCACGCCATGGGCGGAGGGGTG
TCCATCACTGGAGCCATCGTGTGCGAGTCCCTCCTCACCATGATCCTGGT
CCTCACCGTGCTGCTGTCGGCCGTGGACTCGTCCACCACCGGCAAGGCCC
TGCCTCCTCTCGCCATCGGCCTGGCCGTGCTGGTTGGCATTCTCGCAGGC
GGCCCGTTCTCCGGAGCGTCCATGAACCCAGCCCGTGCGTTCGGCCCGGC
GGTCGCGGCTGGAGTGTGGAAGAACCACTATGTCTGGTGGGTGGGACCGG
TCATAGGCGCTCTCGTGGCTGGATTTATCTACAGGGTGTTCCTGGCCAGT
GCGGATCGCCGGCTGATCGCGGGGAACAGGAATAAATATTACTGAATGCC
TCTTCTGAGAATCTCTTCCTTCACTACAGCGCTGAATCTAGGCGACATCT
TCTTGGTTACAGCCATGTCCATCAACATGGGTGACGAGCTGACCCACTTG
ACGCTGGAGAAGGACGACCAGCCGGCCAACAAGTACGAGACTTACGTCAT
GCCTTGTATCGCCGAGTTCGNTTACGTCATGCCATGTATCGCCGAGTTCG
TCGGACTCGTCATCTTCGTCTTCATCGGCACCATGGTAACAGGTCACACA
GCTGCAGGAAACCTGTGGTTAATCTCCATCGCCTTGGCGCACGGGCTCAC
CATAGCCTTGCTTATCGTCTCTATCGGACACATCAGTGGTGGTCACCTGA
ATCCAGCTGTCACCTTGGGCATCACCATTGCCGGTGGGGTCACTGTTCTA
CAGGGCATTTGTTACGTCATCAGTCAGCTGCTGGGGGCCATGGTGGGAGC
GGCATTTACCAGGGCCATCCTACCGAACACAACGTACGCTGCCTGCTCCG
GAGGGGCGCACGCCATGGGCGGAGGGGTGTCCATCACTGGAGCCATCGTG
TGCGAGTCCCTCCTCACCATGATCCTGGTCCTCACCGTGCTGCTGTCGGC
CGTGGACTCGTCCACCACCGGCAAGGCCCTGCCTCCTCTCGCCATCGGCC
TGGCCGTGCTGGTTGGCATTCTCGCAGGCGGCCCGTTCTCCGGAGCGTCC
ATGAACCCAGCCCGTGCGTTCGGCCCGGCGGTCGCGGCTGGAGTGTGGAA
GAACCACTATGTCTGGTGGGTGGGACCGGTCATAGGCGCTCTCGTGGCTG
GATTTATCTACAGGGTGTTCCTGGCCAGTGCGGATCGCCGGCTGATCGCG
GGGAACAGGAATAAATATTACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000033 | genome | Sc0000033:1777797..1781223 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95383_evm1 |
| Biotype | protein_coding |
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