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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95431_evm4 >transcript:BL95431_evm4-protein ID=transcript:BL95431_evm4-protein|Name=transcript:BL95431_evm4|organism=Branchiostoma lanceolatum|type=polypeptide|length=187bp
MRPARRTGWDRRGGAEDPGEGPDYSGSGVCKWFDVSKGFGFITPDGGGDD
IFVYQKLRDSVYTIVRHWPEIALASLSEARVHIYQKADDNALSMARGNAP
AVGPHTSPKPSVHGEKFSRRHKTEREGEVYRAPYGSRDGETTGVPTEDIV
QQGAEKAPVKPPSAANAYSTASWPQVNSPTFPIAPPT Run BLAST on NCBI mRNA from alignment at Sc0000040:168385..172050+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95431_evm4 ID=transcript:BL95431_evm4|Name=transcript:BL95431_evm4|organism=Branchiostoma lanceolatum|type=mRNA|length=3666bp|location=Sequence derived from alignment at Sc0000040:168385..172050+ (Branchiostoma lanceolatum)
ATGCGGCCAGCACGAAGGACGGGGTGGGATCGGCGTGGTCAGTGTGCCCC
GCGCGCTATGACGGCCGCCCACGCCGTCCTGGTGTGGTCAGGGCCCCTTG
TGGTCAAGCTAGTCGCCCGGGAGTGACCGGAGACAGCGCGTAGGGACTGC
GATCCTTCCCCGGACCTGTCCAAATCACTGGGAGGCCGCCATGTTCGTTG
TCGATCGCGGAGGACGGTAGTAGCCCGTCCATCGTGTTGTAAAGGCGAAC
CGTGCGGCGCATGAAGACCTCTCCGCCGACCCCATTGTTGCCCTGTCCCG
CGCACTGACCGCCCCATGTGCCCCCCCGCCGCACTCACTCATCCTACCCC
TGCTCTTCCCGTTCCTTCAGGGGGAGCCGAGGACCCCGGGGAGGGCCCGG
ACTACAGCGGCTCCGGCGTCTGCAAATGGTTCGACGTGTCCAAGGGCTTC
GGCTTCATCACTCCCGACGGGGGAGGCGACGACATCTTCGTCTACCAAGT
AAGGAGCCTGCCCTTCACGTATACACATACATCTATATACGCATATACAG
CGCTTTAGATACGCCGGCCTGCACATGTTGACACCCCGTATAGCGGTACT
TCCGGCTGTATCGCGCACACGCACAAACGTATACAAATATCTGTCACTAG
ATACATTAACTTTTTATACAAGAAAAGTATTGAGTATACTTTTTAACCTG
ATCTTCAACCCATGTGACTTTAATAGATATATGATAAGGCATTTTATCTA
AAACGTTTATACAACTTTCTTTACATTTGTAGAACTCTAAGTCTAACACA
TTGTTTCTTGAATTTCATTGGTATTTTCTTATCTACTTTTTATAAAAGTA
TGAATATGTCTTCTGTATAGATGATGATAAAGGATGTAGTCATCAAAATA
TTTTAAAGGCTCTTTTAGAAATGGAATAAGACAATTTTTACATAAGCCTT
TTATCCCACACTTTCTTTACATATGTAAAAGGTCTTTACAGTGTTTGTAG
AAGTAGAATTTTATTGGTATTGGCTTTTCTGCTTTTTATGAATGAATATT
TCTTCTATGGTGATAAAGGAGTTCGTCATTTAAGCGTTTTAAAAGCTTTT
GAAACATTATGACCACTTGGATAATGGATAGATGAAATAACACTGGATAT
AAGAAGAAGAAAAAGAGGAACAAAAGACACAAATGAATTAAATAGTTGTC
TTCCCAGTGTTTATCACAACAATGGTGAGGAGAAAGCCTTGGGGATTACA
CGGAAAGAGGATTCCATCCCGAATTGTTGACCATCCTTGGTATTTTTACT
TCCATACTTGAACTGAACAGGGAATAGGAGTTAGGTCTGTTGTTGATCGA
ATTGATAAGAGGGCATTGCTCTTTCTTGTGTATACACTTGCTTTGATGGT
GTAGAGCAGAGCTTGGTGTAGAGTTGTAGGTCTGGGAGGTTGTCTTTGGG
AGGTCAGTCATTGTCATATTGTCCGGAGGGTTTCCGTTTGTGTGTTAGGG
CTGCGAGAAAAATAAGCGGACCGTCCGCGGTGGACTCGAGTAACCCTGTC
CGTGCATGGAGGTTAACCGTTTCATTTGACCTCGTCGGGCACAAAGATAC
CTAGATTATGTTCTGTAACACTGCCTGGTGGATACAAAAGCCTTAAAGTT
CTGTAAAAATCCTTAAGTGACACCGAAGTAGACAATCCCTTTGCCTCTGT
TGTGACAGAAGTTGCGGGATTCGGTTTACACCATCGTACGCCATTGGCCC
GAGATCGCCCTGGCCTCTCTCTCGGAAGCGAGGGTTCACATATGTATGGT
CCGTGACTGCCCTAGCGGTGAACCTAGCGCTCTGTGGACATTTCAAGGTC
CCGCTGTATTTATTACCTCCCAAATCTCTCCCTCCGTTTTTAGAACTAAC
CAGATATGTACCTGTATAGATGATGTACCACAGGCCTTTGATCTTTCGAC
ATGTGTAGGAAGAACCACATCAGGGCGTGGACCGAAGAGAAAGGATTTCT
TTTTTACTAGGGTCGCTCGGTGTGTGTGTGTTTACGAACTCCCCTGTCCA
AGCTCGTTTGCTCACTGTTCTAGTTCGGTTAGGTTTTCTTTTCTAACGGA
ATGTTGAATGGGCGTTCCAGGTCTAAACGTACCGATACAGGAGGTGTTGA
GAGAAAAGTGTAACGCGGTAAAAATCGGTGACCTTGGTAGCGCGGGGACC
CGTTAATACGGAACCTGTCGTGCCGTGTTGTCGGCCACTGTTTTAACATT
CCCCCGACAGTAACGGCAGGGATTGGCCGGTCGGCTTTTTAAAGGGTAAC
GCTAGGAACTTGTCCTAAGAATTCGGTCAGGGCCTTGGCCGCAAATTCAG
CTGGAAGCGAAGGCCAGAGATCCCGAGCGTGTCAAGAGGCCGAGTGGTTG
TCCTTATGATGACAGCGGAGCCCCGGCCAGGCGCCGTGTGTACCGAACTC
GCCTGGAAGAAATCGCTCACTTTAACTTCTCCGCAAAAACGTCACGTTAA
GAATTTGTTCACGCGTTTTAAAGATGGTATAAGAGAATTTATTGTCTGTT
TTGTGTGTAGAAAAAAAGAGTTGATGTTTCGAGATTCGGACGCCATTTTT
TGTGGAGATGAAAGCATGGTCTATTCCCCAGCCAGATCAAAAGGCCGACG
ACAATGCGCTCAGTATGGCGCGGGGGAATGCGCCCGCCGTCGGACCCCAC
ACCTCGCCCAAACCCTCCGTACACGGCGAGAAATTCTCCCGGGTTCGAGT
CGTGCATAATTTTCGTGGATTGCCTGTGATTCAATGGGTCTGTCGGTGAG
ATTAGGAAGATTTTGTACGTGTGTATTGAGAAGGAATAAATGGTGGAATC
CACACTCACACCGCACGTCGGGACAGGAGCCCGGTTCCCAGACGCGAGAG
GAAATACGTTGTCGACAACGCCGCGTTTTCGCGATGATGTCTGACCACAA
CAGCCTTTCTATTCACCCAAAAGGTATAATCTTCTTAGGATACGCACAAT
CAAAGCGTTTTCCGTTGTAGATTTTTGTCTGTGAAGTTTAAATCTGCGGG
TTAGAATCTTTGAGCGTCGACGAACGCTGACAAGTGCGGACGGGAAAAGA
TGGATTCGTAGTACAACGGGCGTTTGTAGTCGAGCCTCGCGCGACGAAAA
CTCACTTTCCAACGGCCGGCGTGGTTTGTATATACACCCGGCGTACCCGA
GCCATCGTGAGAGAAGACCTCCTCAAATATTCACACGTGCTAACGATCTT
TGCAGTCGCCAGTGGGATGCTTTACACAGCCATTTACCGAGCCGTAGTAA
ATAAGGAGGATAAAAATCGCCGTCAAGTATATGATGACTTGTGCAAACTG
GCGGACTCACTACGACCAAACAGACCGATTGTTTTACTCGCAAAGATTTA
CTTTTAGAACGCTGGTGAAAAATACAGTAAACCTGGGCTTAGAANTGCGT
CACGTGTAGCGGCACAAAACAGAGAGAGAGGGGGAAGTGTACAGGGCTCC
TTACGGGTCGAGAGACGGGGAGACCACCGGTGTGCCGACTGAGGACATCG
TGCAACAAGGAGCTGAGAAGGCCCCGGTCAAGCCGCCCAGCGCAGCCAAC
GCGTACAGCACGGCGTCATGGCCTCAGGTTAACAGCCCCACTTTTCCCAT
CGCTCCGCCGACGTAA Coding sequence (CDS) from alignment at Sc0000040:168385..172050+ >transcript:BL95431_evm4 ID=transcript:BL95431_evm4|Name=transcript:BL95431_evm4|organism=Branchiostoma lanceolatum|type=CDS|length=2820bp|location=Sequence derived from alignment at Sc0000040:168385..172050+ (Branchiostoma lanceolatum)
ATGCGGCCAGCACGAAGGACGGGGTGGGATCGGCGTGGGGGAGCCGAGGA
CCCCGGGGAGGGCCCGGACTACAGCGGCTCCGGCGTCTGCAAATGGTTCG
ACGTGTCCAAGGGCTTCGGCTTCATCACTCCCGACGGGGGAGGCGACGAC
ATCTTCGTCTACCAAAAGTTGCGGGATTCGGTTTACACCATCGTACGCCA
TTGGCCCGAGATCGCCCTGGCCTCTCTCTCGGAAGCGAGGGTTCACATAT
ATCAAAAGGCCGACGACAATGCGCTCAGTATGGCGCGGGGGAATGCGCCC
GCCGTCGGACCCCACACCTCGCCCAAACCCTCCGTACACGGCGAGAAATT
CTCCCGGCGGCACAAAACAGAGAGAGAGGGGGAAGTGTACAGGGCTCCTT
ACGGGTCGAGAGACGGGGAGACCACCGGTGTGCCGACTGAGGACATCGTG
CAACAAGGAGCTGAGAAGGCCCCGGTCAAGCCGCCCAGCGCAGCCAACGC
GTACAGCACGGCGTCATGGCCTCAGGTTAACAGCCCCACTTTTCCCATCG
CTCCGCCGACGTAAATGCGGCCAGCACGAAGGACGGGGTGGGATCGGCGT
GGGGGAGCCGAGGACCCCGGGGAGGGCCCGGACTACAGCGGCTCCGGCGT
CTGCAAATGGTTCGACGTGTCCAAGGGCTTCGGCTTCATCACTCCCGACG
GGGGAGGCGACGACATCTTCGTCTACCAAAAGTTGCGGGATTCGGTTTAC
ACCATCGTACGCCATTGGCCCGAGATCGCCCTGGCCTCTCTCTCGGAAGC
GAGGGTTCACATATATCAAAAGGCCGACGACAATGCGCTCAGTATGGCGC
GGGGGAATGCGCCCGCCGTCGGACCCCACACCTCGCCCAAACCCTCCGTA
CACGGCGAGAAATTCTCCCGGCGGCACAAAACAGAGAGAGAGGGGGAAGT
GTACAGGGCTCCTTACGGGTCGAGAGACGGGGAGACCACCGGTGTGCCGA
CTGAGGACATCGTGCAACAAGGAGCTGAGAAGGCCCCGGTCAAGCCGCCC
AGCGCAGCCAACGCGTACAGCACGGCGTCATGGCCTCAGGTTAACAGCCC
CACTTTTCCCATCGCTCCGCCGACGTAAATGCGGCCAGCACGAAGGACGG
GGTGGGATCGGCGTGGGGGAGCCGAGGACCCCGGGGAGGGCCCGGACTAC
AGCGGCTCCGGCGTCTGCAAATGGTTCGACGTGTCCAAGGGCTTCGGCTT
CATCACTCCCGACGGGGGAGGCGACGACATCTTCGTCTACCAAAAGTTGC
GGGATTCGGTTTACACCATCGTACGCCATTGGCCCGAGATCGCCCTGGCC
TCTCTCTCGGAAGCGAGGGTTCACATATATCAAAAGGCCGACGACAATGC
GCTCAGTATGGCGCGGGGGAATGCGCCCGCCGTCGGACCCCACACCTCGC
CCAAACCCTCCGTACACGGCGAGAAATTCTCCCGGCGGCACAAAACAGAG
AGAGAGGGGGAAGTGTACAGGGCTCCTTACGGGTCGAGAGACGGGGAGAC
CACCGGTGTGCCGACTGAGGACATCGTGCAACAAGGAGCTGAGAAGGCCC
CGGTCAAGCCGCCCAGCGCAGCCAACGCGTACAGCACGGCGTCATGGCCT
CAGGTTAACAGCCCCACTTTTCCCATCGCTCCGCCGACGTAAATGCGGCC
AGCACGAAGGACGGGGTGGGATCGGCGTGGGGGAGCCGAGGACCCCGGGG
AGGGCCCGGACTACAGCGGCTCCGGCGTCTGCAAATGGTTCGACGTGTCC
AAGGGCTTCGGCTTCATCACTCCCGACGGGGGAGGCGACGACATCTTCGT
CTACCAAAAGTTGCGGGATTCGGTTTACACCATCGTACGCCATTGGCCCG
AGATCGCCCTGGCCTCTCTCTCGGAAGCGAGGGTTCACATATATCAAAAG
GCCGACGACAATGCGCTCAGTATGGCGCGGGGGAATGCGCCCGCCGTCGG
ACCCCACACCTCGCCCAAACCCTCCGTACACGGCGAGAAATTCTCCCGGC
GGCACAAAACAGAGAGAGAGGGGGAAGTGTACAGGGCTCCTTACGGGTCG
AGAGACGGGGAGACCACCGGTGTGCCGACTGAGGACATCGTGCAACAAGG
AGCTGAGAAGGCCCCGGTCAAGCCGCCCAGCGCAGCCAACGCGTACAGCA
CGGCGTCATGGCCTCAGGTTAACAGCCCCACTTTTCCCATCGCTCCGCCG
ACGTAAATGCGGCCAGCACGAAGGACGGGGTGGGATCGGCGTGGGGGAGC
CGAGGACCCCGGGGAGGGCCCGGACTACAGCGGCTCCGGCGTCTGCAAAT
GGTTCGACGTGTCCAAGGGCTTCGGCTTCATCACTCCCGACGGGGGAGGC
GACGACATCTTCGTCTACCAAAAGTTGCGGGATTCGGTTTACACCATCGT
ACGCCATTGGCCCGAGATCGCCCTGGCCTCTCTCTCGGAAGCGAGGGTTC
ACATATATCAAAAGGCCGACGACAATGCGCTCAGTATGGCGCGGGGGAAT
GCGCCCGCCGTCGGACCCCACACCTCGCCCAAACCCTCCGTACACGGCGA
GAAATTCTCCCGGCGGCACAAAACAGAGAGAGAGGGGGAAGTGTACAGGG
CTCCTTACGGGTCGAGAGACGGGGAGACCACCGGTGTGCCGACTGAGGAC
ATCGTGCAACAAGGAGCTGAGAAGGCCCCGGTCAAGCCGCCCAGCGCAGC
CAACGCGTACAGCACGGCGTCATGGCCTCAGGTTAACAGCCCCACTTTTC
CCATCGCTCCGCCGACGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000040 | genome | Sc0000040:168385..172050 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95431_evm4 |
| Biotype | protein_coding |
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