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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95433_evm2 >transcript:BL95433_evm2-protein ID=transcript:BL95433_evm2-protein|Name=transcript:BL95433_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=230bp
MRPARRTGWDRRGGAEDPGEGPDYSGSGVCKWFDVSKGFGFITPDGGGDD
IFVYQKLRDSVYTIVRHWPEIALASLSEARVHIYQKADDXRGSGRTHRPH
ATPEGGALSSSHKSTRTMGPGRSGGRAGRGKVAGGPVCDTAAQDGSHKGK
DAAEGKINAESGRHKTEREGEVYRAPYGSRDGETTGVPTEDIVQQGAEKA
PVKPPSAANAYSTASWPQVNSPTFPIAPPT Run BLAST on NCBI mRNA from alignment at Sc0000040:164364..168179+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95433_evm2 ID=transcript:BL95433_evm2|Name=transcript:BL95433_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=3816bp|location=Sequence derived from alignment at Sc0000040:164364..168179+ (Branchiostoma lanceolatum)
ATGCGGCCAGCACGAAGGACGGGGTGGGATCGGCGTGGTCAGTGTGCCCC
GCGCGCTATGACGGCCGCCCACGCCGTCCTGGTGTGGTCAGGGCCCCTTG
TGGTCAAGCTAGTCGCCCGGGAGTGACCGGAGACAGCGCGTAGGGACTGC
GATCCTTCCCCGGACCTGTCCAAATCACTGGGAGGCCGCCATGTTCGTTG
TCGATCGCGGAGGACGGTAGTAGCCCGTCCATCGTGTTGTAAAGGCGAAC
CGTGCGGCGCATGAAGACCTCTCCGCCGACCCCATTGTTGCCCTGTCCCG
CGCACTGACCGCCCCATGTGCCCCCCCGCCGCACTCACTCATCCTACCCC
TGCTCTTCCCGTTCCTTCAGGGGGAGCCGAGGACCCCGGGGAGGGCCCGG
ACTACAGCGGCTCCGGCGTCTGCAAATGGTTCGACGTGTCCAAGGGCTTC
GGCTTCATCACTCCCGACGGGGGAGGCGACGACATCTTCGTCTACCAAGT
AAGGAGCCTGCCCTTCACGTATACACATACATCTATATACGCATATACAG
CGCTTTAGATACGCCGGCCTGCACATGTTGACACCCCGTATAGCGGTACT
TCCGGCTGTATCGCGCACACGCACAAACGTATACAAATATCTGTCACTAG
ATACATTAACTTTTTATACAAGAAAAGTATTGAGTATACTTTTTAACCTG
ATCTTCAACCCATGTGACTTTAATAGATATATGATAAGGCATTTTATCTA
AAACGTTTATACAACTTTCTTTACATTTGTAGAACTCTAAGTCTAACACA
TTGTTTCTTGAATTTCATTGGTATTTTCTTATCTACTTTTTATAAAAGTA
TGAATATGTCTTCTGTATAGATGATGATAAAGGATGTAGTCATCAAAATA
TTTTAAAGGCTCTTTTAGAAATGGAATAAGACAATTTTTACATAAGCCTT
TTATCCCACACTTTCTTTACATATGTAAAAGGTCTTTACAGTGTTTGTAG
AAGTAGAATTTTATTGGTATTGGCTTTTCTGCTTTTTATGAATGAATATT
TCTTCTATGGTGATAAAGGAGTTCGTCATTTAAGCGTTTTAAAAGCTTTT
GAAACATTATGACCACTTGGATAATGGATAGATGAAATAACACTGGATAT
AAGAAGAAGAAAAAGAGGAACAAAAGACACAAATGAATTAAATAGTTGTC
TTCCCAGTGTTTATCACAACAATGGTGAGGAGAAAGCCTTGGGGATTACA
CGGAAAGAGGATTCCATCCCGAATTGTTGACCATCCTTGGTATTTTTACT
TCCATACTTGAACTGAACAGGGAATAGGAGTTAGGTCTGTTGTTGATCGA
ATTGATAAGAGGGCATTGCTCTTTCTTGTGTATACACTTGCTTTGATGGT
GTAGAGCAGAGCTTGGTGTAGAGTTGTAGGTCTGGGAGGTTGTCTTTGGG
AGGTCAGTCATTGTCATATTGTCCGGAGGGTTTCCGTTTGTGTGTTAGGG
CTGCGAGAAAAATAAGCGGACCGTCCGCGGTGGACTCGAGTAACCCTGTC
CGTGCATGGAGGTTAACCGTTTCATTTGACCTCGTCGGGCACAAAGATAC
CTAGATTATGTTCTGTAACACTGCCTGGTGGATACAAAAGCCTTAAAGTT
CTGTAAAAATCCTTAAGTGACACCGAAGTAGACAATCCCTTTGCCTCTGT
TGTGACAGAAGTTGCGGGATTCGGTTTACACCATCGTACGCCATTGGCCC
GAGATCGCCCTGGCCTCTCTCTCGGAAGCGAGGGTTCACATATGTATGGT
CCGTGACTGCCCCAGCGGTGAACCTAGCGCTCTGTGGACATTTCAAGGTC
CCGCTGTATTTATTACCTCCCAAATCTCTCCCTCCGTTTTTAGAACTAAC
CAGATATGTACCTGTATAGATGATGTACCACAGGCCTTTGATCTTTCGAC
ATGTGTAGGAAGAACCACATCAGGGCGTGGACCGAAGAGAAAGGATTTCT
TTTTTACTAGGGTCGCTCGGTGTGTGTGTGTTTACGAACTCCCCTGTCCA
AGCTCGTTTGCTCACTGTTCTAGTTCGGTTCGGTTTTCTTTTCTAACGGA
ATGTTGAATGGGCGTTTCTGGTCTAAACGTACCGATCCAGGAGGTGTTGA
GAGAGAGGTGTAACGCGGTAAAAATCGGTGACCTTGGTAGCGCGGGGACC
CGTTAATACGGAACCTGTCGTGCCGTGTTGTCGGCCACTGTTTTAACATT
CCCCCGACAGTAACGGCAGGGATTGGCCGGTCGGCTTTTTAAAGGGTAAC
GCTAGGAACTTGTCCTAAGAATTCGGTCAGGGCCTTGGCCGCAAATTCAG
CTGGAAGCGAAGGCCAGAGATCCCGAGCGTGTCAAGAGGCCGAGTGGTTG
TCCTTATGATGACAGCGGAGCCCCGGCCAGGCGCCGTGTGTACCGAACTC
GCCTGGAAGAAATCGCTCACTTTAACTTCTCCGCAAAAACGTCACGTTAA
GAATTTGTTCACGCGTTTTAAAGATGGTATAAGAGAATTTATTGTCTGTT
TTGTGTGTAGAAAAAAAGAGTTGATGTTTCGAGATTCGGACGCCATTTTT
TGTGGAGATGAAAGCATGGTCTATTCCCCAGCCAGATCAAAAGGCCGACG
ACAANCGGGGCAGTGGCCGGACACACAGACCACACGCTACGCCAGAGGGC
GGCGCTCTGTCCAGCTCGCACAAATCAACTCGTACAATGGGTCCCGGGCG
CAGCGGGGGCCGGGCGGGTCGGGGAAAGGTCGCGGGCGGTCCTGTGTGCG
ACACGGCTGCACAAGATGGTTCTCACAAGGGGAAAGACGCCGCGGAAGGA
AAAATAAACGCGGAGAGCGGAGTTAGGTTGAAGCGCGCGGGGTGTAATAC
GAGGAAGGGTCACGAACTAGTGCCCGCCAGCCTTGTACCAAGGCGAACAT
CAATTTTGTCGCGGCGTGGAATCCCTGACCACTGCTGAAAGGGCCGAGGG
TAGACCGGCCGGCGCCACCGCAGCCGGCCTATTTCGGCCGAATCAAAGAA
GGGGGCGGGTTTGAGGGCACCCTCGGGAGAAGGGGGGGGGGACGTGAAAG
ACGCGCTCACCAATCCTGCTACTAGATTCACTCTTGGTTTTCGAGAGAAA
ACAAACTTGTGGAAAAAAAAGAAGGAAAGAGAATATAAGCGCATTCTGCT
CGCGAAGTTTGCGCTGGGTAAAAGAGGGGGAGGGGAATCCAACTGCCTCC
GCTTCGTTTGACCTTTGAACTTTTTCCACGATATCGTACATTCGCAAAAC
AGCGTAAATATACCGTTGGGCCTACGCTCTAGGCGTGTCCCCCTATACTT
CCACTCGCACTTCGCAAGGATACAGAGCAAAAAAAAACACACATGCACAC
TCGCATAGCGCGGCGTGTTTTCCCTGTCGGATTACCCGTTTGGGGTCAGT
GAAATCCCGGTCCTATCGACGGTTTGAATTTGATTTGGATAATCAATTTT
ATTCTCAATGACAGGTAGCACAGCCACGCCATTGGCTGTTGCCAGGGCGG
CCGCTGATTGGTATGTGTAATTAGTGGCAAAGAGCCATGTAATTGTGCGT
CACGTGTAGCGGCACAAAACAGAGAGAGAGGGGGAAGTGTACAGGGCTCC
TTACGGGTCGAGAGACGGGGAGACCACCGGTGTGCCGACTGAGGACATCG
TGCAACAAGGAGCTGAGAAGGCCCCGGTCAAGCCGCCCAGCGCAGCCAAC
GCGTACAGCACGGCGTCATGGCCTCAGGTTAACAGCCCCACTTTTCCCAT
CGCTCCGCCGACGTAA Coding sequence (CDS) from alignment at Sc0000040:164364..168179+ >transcript:BL95433_evm2 ID=transcript:BL95433_evm2|Name=transcript:BL95433_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=3465bp|location=Sequence derived from alignment at Sc0000040:164364..168179+ (Branchiostoma lanceolatum)
ATGCGGCCAGCACGAAGGACGGGGTGGGATCGGCGTGGGGGAGCCGAGGA
CCCCGGGGAGGGCCCGGACTACAGCGGCTCCGGCGTCTGCAAATGGTTCG
ACGTGTCCAAGGGCTTCGGCTTCATCACTCCCGACGGGGGAGGCGACGAC
ATCTTCGTCTACCAAAAGTTGCGGGATTCGGTTTACACCATCGTACGCCA
TTGGCCCGAGATCGCCCTGGCCTCTCTCTCGGAAGCGAGGGTTCACATAT
ATCAAAAGGCCGACGACAANCGGGGCAGTGGCCGGACACACAGACCACAC
GCTACGCCAGAGGGCGGCGCTCTGTCCAGCTCGCACAAATCAACTCGTAC
AATGGGTCCCGGGCGCAGCGGGGGCCGGGCGGGTCGGGGAAAGGTCGCGG
GCGGTCCTGTGTGCGACACGGCTGCACAAGATGGTTCTCACAAGGGGAAA
GACGCCGCGGAAGGAAAAATAAACGCGGAGAGCGGACGGCACAAAACAGA
GAGAGAGGGGGAAGTGTACAGGGCTCCTTACGGGTCGAGAGACGGGGAGA
CCACCGGTGTGCCGACTGAGGACATCGTGCAACAAGGAGCTGAGAAGGCC
CCGGTCAAGCCGCCCAGCGCAGCCAACGCGTACAGCACGGCGTCATGGCC
TCAGGTTAACAGCCCCACTTTTCCCATCGCTCCGCCGACGTAAATGCGGC
CAGCACGAAGGACGGGGTGGGATCGGCGTGGGGGAGCCGAGGACCCCGGG
GAGGGCCCGGACTACAGCGGCTCCGGCGTCTGCAAATGGTTCGACGTGTC
CAAGGGCTTCGGCTTCATCACTCCCGACGGGGGAGGCGACGACATCTTCG
TCTACCAAAAGTTGCGGGATTCGGTTTACACCATCGTACGCCATTGGCCC
GAGATCGCCCTGGCCTCTCTCTCGGAAGCGAGGGTTCACATATATCAAAA
GGCCGACGACAANCGGGGCAGTGGCCGGACACACAGACCACACGCTACGC
CAGAGGGCGGCGCTCTGTCCAGCTCGCACAAATCAACTCGTACAATGGGT
CCCGGGCGCAGCGGGGGCCGGGCGGGTCGGGGAAAGGTCGCGGGCGGTCC
TGTGTGCGACACGGCTGCACAAGATGGTTCTCACAAGGGGAAAGACGCCG
CGGAAGGAAAAATAAACGCGGAGAGCGGACGGCACAAAACAGAGAGAGAG
GGGGAAGTGTACAGGGCTCCTTACGGGTCGAGAGACGGGGAGACCACCGG
TGTGCCGACTGAGGACATCGTGCAACAAGGAGCTGAGAAGGCCCCGGTCA
AGCCGCCCAGCGCAGCCAACGCGTACAGCACGGCGTCATGGCCTCAGGTT
AACAGCCCCACTTTTCCCATCGCTCCGCCGACGTAAATGCGGCCAGCACG
AAGGACGGGGTGGGATCGGCGTGGGGGAGCCGAGGACCCCGGGGAGGGCC
CGGACTACAGCGGCTCCGGCGTCTGCAAATGGTTCGACGTGTCCAAGGGC
TTCGGCTTCATCACTCCCGACGGGGGAGGCGACGACATCTTCGTCTACCA
AAAGTTGCGGGATTCGGTTTACACCATCGTACGCCATTGGCCCGAGATCG
CCCTGGCCTCTCTCTCGGAAGCGAGGGTTCACATATATCAAAAGGCCGAC
GACAANCGGGGCAGTGGCCGGACACACAGACCACACGCTACGCCAGAGGG
CGGCGCTCTGTCCAGCTCGCACAAATCAACTCGTACAATGGGTCCCGGGC
GCAGCGGGGGCCGGGCGGGTCGGGGAAAGGTCGCGGGCGGTCCTGTGTGC
GACACGGCTGCACAAGATGGTTCTCACAAGGGGAAAGACGCCGCGGAAGG
AAAAATAAACGCGGAGAGCGGACGGCACAAAACAGAGAGAGAGGGGGAAG
TGTACAGGGCTCCTTACGGGTCGAGAGACGGGGAGACCACCGGTGTGCCG
ACTGAGGACATCGTGCAACAAGGAGCTGAGAAGGCCCCGGTCAAGCCGCC
CAGCGCAGCCAACGCGTACAGCACGGCGTCATGGCCTCAGGTTAACAGCC
CCACTTTTCCCATCGCTCCGCCGACGTAAATGCGGCCAGCACGAAGGACG
GGGTGGGATCGGCGTGGGGGAGCCGAGGACCCCGGGGAGGGCCCGGACTA
CAGCGGCTCCGGCGTCTGCAAATGGTTCGACGTGTCCAAGGGCTTCGGCT
TCATCACTCCCGACGGGGGAGGCGACGACATCTTCGTCTACCAAAAGTTG
CGGGATTCGGTTTACACCATCGTACGCCATTGGCCCGAGATCGCCCTGGC
CTCTCTCTCGGAAGCGAGGGTTCACATATATCAAAAGGCCGACGACAANC
GGGGCAGTGGCCGGACACACAGACCACACGCTACGCCAGAGGGCGGCGCT
CTGTCCAGCTCGCACAAATCAACTCGTACAATGGGTCCCGGGCGCAGCGG
GGGCCGGGCGGGTCGGGGAAAGGTCGCGGGCGGTCCTGTGTGCGACACGG
CTGCACAAGATGGTTCTCACAAGGGGAAAGACGCCGCGGAAGGAAAAATA
AACGCGGAGAGCGGACGGCACAAAACAGAGAGAGAGGGGGAAGTGTACAG
GGCTCCTTACGGGTCGAGAGACGGGGAGACCACCGGTGTGCCGACTGAGG
ACATCGTGCAACAAGGAGCTGAGAAGGCCCCGGTCAAGCCGCCCAGCGCA
GCCAACGCGTACAGCACGGCGTCATGGCCTCAGGTTAACAGCCCCACTTT
TCCCATCGCTCCGCCGACGTAAATGCGGCCAGCACGAAGGACGGGGTGGG
ATCGGCGTGGGGGAGCCGAGGACCCCGGGGAGGGCCCGGACTACAGCGGC
TCCGGCGTCTGCAAATGGTTCGACGTGTCCAAGGGCTTCGGCTTCATCAC
TCCCGACGGGGGAGGCGACGACATCTTCGTCTACCAAAAGTTGCGGGATT
CGGTTTACACCATCGTACGCCATTGGCCCGAGATCGCCCTGGCCTCTCTC
TCGGAAGCGAGGGTTCACATATATCAAAAGGCCGACGACAANCGGGGCAG
TGGCCGGACACACAGACCACACGCTACGCCAGAGGGCGGCGCTCTGTCCA
GCTCGCACAAATCAACTCGTACAATGGGTCCCGGGCGCAGCGGGGGCCGG
GCGGGTCGGGGAAAGGTCGCGGGCGGTCCTGTGTGCGACACGGCTGCACA
AGATGGTTCTCACAAGGGGAAAGACGCCGCGGAAGGAAAAATAAACGCGG
AGAGCGGACGGCACAAAACAGAGAGAGAGGGGGAAGTGTACAGGGCTCCT
TACGGGTCGAGAGACGGGGAGACCACCGGTGTGCCGACTGAGGACATCGT
GCAACAAGGAGCTGAGAAGGCCCCGGTCAAGCCGCCCAGCGCAGCCAACG
CGTACAGCACGGCGTCATGGCCTCAGGTTAACAGCCCCACTTTTCCCATC
GCTCCGCCGACGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000040 | genome | Sc0000040:164364..168179 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95433_evm2 |
| Biotype | protein_coding |
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