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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95453_evm0 >transcript:BL95453_evm0-protein ID=transcript:BL95453_evm0-protein|Name=transcript:BL95453_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=420bp
MASSHLGLAALLSLLFVISTSSAAPVPDGRGGKLLLVILDGFRWDLDRLE
DLPNLAAFSAEGVNVPYVTPAYVTLTVPCIFTILTGCHPETHGVLHNIFF
DKSTGDFAFPEEVDNSTQILDPGIEPIVVTASRQGKRTGTYMLTPIPGIL
PDVYHYEPLSTQNETYGGYLRAVNTVLDWFTTDGIDFTALYISKLDTLSH
IYGPESAAARTVLKELDGVIGYLLQQVKQRGLTDLNIILTADHGMRQVYD
VPNPIEILRYVNASSLQMLIADYGPLALIQPAPGRREEVHAALAGSHPNM
TVYYKEDFPTRFHYANSPRMADILAMADPGYVFYSRYAGALQYQGEHGYD
NRDLTMKALFRAWGPNFRRGYVRPDPFDSVHIYPLMCEILGVDPAPNNGT
LVEVSDMLASVGCPEARKYD Run BLAST on NCBI mRNA from alignment at Sc0000042:1086227..1088853- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95453_evm0 ID=transcript:BL95453_evm0|Name=transcript:BL95453_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2627bp|location=Sequence derived from alignment at Sc0000042:1086227..1088853- (Branchiostoma lanceolatum)
ATGGCGTCGTCCCATCTAGGTCTAGCAGCTTTGCTCTCTCTGTTGTTTGT
GATCTCTACCTCATCGGCTGCTCCCGTGCCGGATGGAAGAGGCGGCAAAC
TCCTGCTCGTCATCCTGGACGGGTTCCGGTGGGACCTGGACCGGCTGGAG
GACCTGCCGAACCTGGCCGCCTTCTCGGCCGAGGGCGTGAACGTGCCGTA
CGTCACTCCTGCCTACGTCACGCTAACAGTGCCCTGTATCTTCACCATTT
TGACAGGTAAGTCCTAGTTCTGAAGAAACTAATTTTGAAAATGCACGATC
GCTTCAAACGTTGATAATTAGATAAGAAGGAACATGCATGAAGACATACA
CATATACATGCAAATGTGTGTGTGTGTGTTTATGTGTGTGTGTGTCTGTG
TGTGTGTGTTTCAACACTGAAACAGTGTATCCTATGGGAGGAGGGGTTGT
GTGCTAGCACTCTAATATTTTTGTTTCACTCAATAGTACTTTCATTTGTC
TCGTAATCTGGTATTTACACGAGGCAAAAAATGGAGCATAGACAATAAAG
CTTGGTATCTGTAGTACGTAATGAAACTATCAAATTTACATACAAAGCCA
ATAGAGTTACTTGTTAGCAACCAGGTGACATCGAGTTATGCTAAAATTAA
TTAAGTCAAAGCATCACACCATCATCCATGTCGAGCCAGATTTGCTGATG
AAAGCAAAAGCAAAGATTACTCTACATCTTGAAATTTTTAGGTGCTTTTA
TTTTCACGTGGTGATGTCTCTATCGCGAATTCATGACACCGTGGATATGC
ATTTCAAATGTATTTCTACGGAATTGTTTCAACCGCGATCTTAAAACACC
GCAAAAAACCTTTTGCCCTCCTACCAAAAATAGTCCTTCGAACATAAATG
AATTTACTATATAGATTTATGACGTCCTTAAGGAGTCCTATGTAACTTGT
GTTTTCCAGGTTGTCACCCAGAAACCCACGGCGTTCTTCATAACATATTT
TTCGACAAGTCCACTGGGGATTTCGCCTTTCCAGAAGAGGTGGATAATTC
CACCCAGATTCTCGACCCCGGCATCGAACCGATCGTAGTGACGGCCAGCC
GACAGGGCAAGCGAACTGGAACTTACATGCTTACCCCTATCCCAGGAATT
CTCCCGGACGTCTACCACTACGAACCTCTGTCCACTCAGAACGAAACGTA
CGGCGGGTACTTGAGAGCCGTGAACACCGTACTGGATTGGTTTACGACCG
ATGGCATCGACTTCACGGCTTTGTACATCTCTAAGCTGGACACCCTGTCA
CACATATACGGGCCCGAGTCCGCGGCCGCCCGAACTGTCCTGAAGGAGTT
AGACGGTGTTATCGGCTACCTGCTCCAACAGGTCAAACAACGAGGACTGA
CGGACCTCAACATCATCCTCACGGCCGATCACGGCATGCGGCAAGTCTAC
GACGTCCCCAACCCGATCGAGATCTTGCGCTACGTGAACGCCTCGTCGCT
ACAAATGCTGATCGCGGACTACGGACCGCTGGCCCTGATCCAGCCCGCCC
CGGGCCGAAGGGAGGAGGTACACGCCGCGCTGGCCGGCAGCCACCCCAAC
ATGACGGTTTACTACAAGGAGGACTTCCCGACCAGATTCCACTACGCCAA
CAGTCCCCGCATGGCAGACATCCTGGCCATGGCGGACCCTGGATACGTCT
TCTACTCGGTAGGTATTTCTAATGGGTTTGCAGTAAATTCTACCTGTATG
CCATTTCAAGCAATTTGGTCTTTACGGTAAGAGGGTGGACGTTTCTGTCT
TCCTCTGTGTGTGTATCTGACTCTCAATATACTCAAAGCAGCATTGCCGC
GATGCACACCTGTGCTGATATTTTATCTCTAGGACTGGAAGGTTTGCAAA
TCAGTATGTATACAAGGAAGTGAAGTCTGCCATTTCTCACTGTGGACCGC
AGAAGTACCTACGCAGACTCACGATCCAGTATAGTTAGACTTAACTCCAT
TGGAGAGAGGTCTGCCGTCACTGATTCCCTTATTTCAAAACAAGATGCGC
GCATAGTTTTAACGTAGTCACTTTACCTTATTATCACCAAGCTCATACGT
ACATGGGCATCGTGTGGCGTGATGGTTAGAACGTTTAATTGGCTCTGATA
TTTTGCCCTTGGGAAAGGCATTCTACTCGACTTTCTGGCTTGTCGACGCC
CGGGCCTTTTGGCTAATCCATTGTCTAACGCGTGTCGTAACACTGATAAG
AACACACATAGGTCTGAAGGGCACATTTGCCACCAAGAACAGTAAAAAGA
TTTTTAGCTCAAAGTACGTTGTTCATATTGTGTCATTGATCTCATAATAA
CGACGCGCTTCTATACCAGCGGTATGCAGGAGCCTTACAATACCAAGGAG
AGCACGGGTACGACAACCGGGATCTGACCATGAAGGCGCTGTTCCGGGCG
TGGGGGCCGAACTTCCGGCGGGGCTACGTGCGACCCGACCCGTTCGACTC
CGTCCACATCTACCCCCTCATGTGCGAGATCCTCGGGGTGGACCCTGCGC
CGAATAACGGCACCCTGGTAGAAGTATCAGATATGCTAGCTTCAGTCGGT
TGTCCGGAGGCTAGAAAATATGATTAG Coding sequence (CDS) from alignment at Sc0000042:1086227..1088853- >transcript:BL95453_evm0 ID=transcript:BL95453_evm0|Name=transcript:BL95453_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=3789bp|location=Sequence derived from alignment at Sc0000042:1086227..1088853- (Branchiostoma lanceolatum)
ATGGCGTCGTCCCATCTAGGTCTAGCAGCTTTGCTCTCTCTGTTGTTTGT
GATCTCTACCTCATCGGCTGCTCCCGTGCCGGATGGAAGAGGCGGCAAAC
TCCTGCTCGTCATCCTGGACGGGTTCCGGTGGGACCTGGACCGGCTGGAG
GACCTGCCGAACCTGGCCGCCTTCTCGGCCGAGGGCGTGAACGTGCCGTA
CGTCACTCCTGCCTACGTCACGCTAACAGTGCCCTGTATCTTCACCATTT
TGACAGGTTGTCACCCAGAAACCCACGGCGTTCTTCATAACATATTTTTC
GACAAGTCCACTGGGGATTTCGCCTTTCCAGAAGAGGTGGATAATTCCAC
CCAGATTCTCGACCCCGGCATCGAACCGATCGTAGTGACGGCCAGCCGAC
AGGGCAAGCGAACTGGAACTTACATGCTTACCCCTATCCCAGGAATTCTC
CCGGACGTCTACCACTACGAACCTCTGTCCACTCAGAACGAAACGTACGG
CGGGTACTTGAGAGCCGTGAACACCGTACTGGATTGGTTTACGACCGATG
GCATCGACTTCACGGCTTTGTACATCTCTAAGCTGGACACCCTGTCACAC
ATATACGGGCCCGAGTCCGCGGCCGCCCGAACTGTCCTGAAGGAGTTAGA
CGGTGTTATCGGCTACCTGCTCCAACAGGTCAAACAACGAGGACTGACGG
ACCTCAACATCATCCTCACGGCCGATCACGGCATGCGGCAAGTCTACGAC
GTCCCCAACCCGATCGAGATCTTGCGCTACGTGAACGCCTCGTCGCTACA
AATGCTGATCGCGGACTACGGACCGCTGGCCCTGATCCAGCCCGCCCCGG
GCCGAAGGGAGGAGGTACACGCCGCGCTGGCCGGCAGCCACCCCAACATG
ACGGTTTACTACAAGGAGGACTTCCCGACCAGATTCCACTACGCCAACAG
TCCCCGCATGGCAGACATCCTGGCCATGGCGGACCCTGGATACGTCTTCT
ACTCGCGGTATGCAGGAGCCTTACAATACCAAGGAGAGCACGGGTACGAC
AACCGGGATCTGACCATGAAGGCGCTGTTCCGGGCGTGGGGGCCGAACTT
CCGGCGGGGCTACGTGCGACCCGACCCGTTCGACTCCGTCCACATCTACC
CCCTCATGTGCGAGATCCTCGGGGTGGACCCTGCGCCGAATAACGGCACC
CTGGTAGAAGTATCAGATATGCTAGCTTCAGTCGGTTGTCCGGAGGCTAG
AAAATATGATTAGATGGCGTCGTCCCATCTAGGTCTAGCAGCTTTGCTCT
CTCTGTTGTTTGTGATCTCTACCTCATCGGCTGCTCCCGTGCCGGATGGA
AGAGGCGGCAAACTCCTGCTCGTCATCCTGGACGGGTTCCGGTGGGACCT
GGACCGGCTGGAGGACCTGCCGAACCTGGCCGCCTTCTCGGCCGAGGGCG
TGAACGTGCCGTACGTCACTCCTGCCTACGTCACGCTAACAGTGCCCTGT
ATCTTCACCATTTTGACAGGTTGTCACCCAGAAACCCACGGCGTTCTTCA
TAACATATTTTTCGACAAGTCCACTGGGGATTTCGCCTTTCCAGAAGAGG
TGGATAATTCCACCCAGATTCTCGACCCCGGCATCGAACCGATCGTAGTG
ACGGCCAGCCGACAGGGCAAGCGAACTGGAACTTACATGCTTACCCCTAT
CCCAGGAATTCTCCCGGACGTCTACCACTACGAACCTCTGTCCACTCAGA
ACGAAACGTACGGCGGGTACTTGAGAGCCGTGAACACCGTACTGGATTGG
TTTACGACCGATGGCATCGACTTCACGGCTTTGTACATCTCTAAGCTGGA
CACCCTGTCACACATATACGGGCCCGAGTCCGCGGCCGCCCGAACTGTCC
TGAAGGAGTTAGACGGTGTTATCGGCTACCTGCTCCAACAGGTCAAACAA
CGAGGACTGACGGACCTCAACATCATCCTCACGGCCGATCACGGCATGCG
GCAAGTCTACGACGTCCCCAACCCGATCGAGATCTTGCGCTACGTGAACG
CCTCGTCGCTACAAATGCTGATCGCGGACTACGGACCGCTGGCCCTGATC
CAGCCCGCCCCGGGCCGAAGGGAGGAGGTACACGCCGCGCTGGCCGGCAG
CCACCCCAACATGACGGTTTACTACAAGGAGGACTTCCCGACCAGATTCC
ACTACGCCAACAGTCCCCGCATGGCAGACATCCTGGCCATGGCGGACCCT
GGATACGTCTTCTACTCGCGGTATGCAGGAGCCTTACAATACCAAGGAGA
GCACGGGTACGACAACCGGGATCTGACCATGAAGGCGCTGTTCCGGGCGT
GGGGGCCGAACTTCCGGCGGGGCTACGTGCGACCCGACCCGTTCGACTCC
GTCCACATCTACCCCCTCATGTGCGAGATCCTCGGGGTGGACCCTGCGCC
GAATAACGGCACCCTGGTAGAAGTATCAGATATGCTAGCTTCAGTCGGTT
GTCCGGAGGCTAGAAAATATGATTAGATGGCGTCGTCCCATCTAGGTCTA
GCAGCTTTGCTCTCTCTGTTGTTTGTGATCTCTACCTCATCGGCTGCTCC
CGTGCCGGATGGAAGAGGCGGCAAACTCCTGCTCGTCATCCTGGACGGGT
TCCGGTGGGACCTGGACCGGCTGGAGGACCTGCCGAACCTGGCCGCCTTC
TCGGCCGAGGGCGTGAACGTGCCGTACGTCACTCCTGCCTACGTCACGCT
AACAGTGCCCTGTATCTTCACCATTTTGACAGGTTGTCACCCAGAAACCC
ACGGCGTTCTTCATAACATATTTTTCGACAAGTCCACTGGGGATTTCGCC
TTTCCAGAAGAGGTGGATAATTCCACCCAGATTCTCGACCCCGGCATCGA
ACCGATCGTAGTGACGGCCAGCCGACAGGGCAAGCGAACTGGAACTTACA
TGCTTACCCCTATCCCAGGAATTCTCCCGGACGTCTACCACTACGAACCT
CTGTCCACTCAGAACGAAACGTACGGCGGGTACTTGAGAGCCGTGAACAC
CGTACTGGATTGGTTTACGACCGATGGCATCGACTTCACGGCTTTGTACA
TCTCTAAGCTGGACACCCTGTCACACATATACGGGCCCGAGTCCGCGGCC
GCCCGAACTGTCCTGAAGGAGTTAGACGGTGTTATCGGCTACCTGCTCCA
ACAGGTCAAACAACGAGGACTGACGGACCTCAACATCATCCTCACGGCCG
ATCACGGCATGCGGCAAGTCTACGACGTCCCCAACCCGATCGAGATCTTG
CGCTACGTGAACGCCTCGTCGCTACAAATGCTGATCGCGGACTACGGACC
GCTGGCCCTGATCCAGCCCGCCCCGGGCCGAAGGGAGGAGGTACACGCCG
CGCTGGCCGGCAGCCACCCCAACATGACGGTTTACTACAAGGAGGACTTC
CCGACCAGATTCCACTACGCCAACAGTCCCCGCATGGCAGACATCCTGGC
CATGGCGGACCCTGGATACGTCTTCTACTCGCGGTATGCAGGAGCCTTAC
AATACCAAGGAGAGCACGGGTACGACAACCGGGATCTGACCATGAAGGCG
CTGTTCCGGGCGTGGGGGCCGAACTTCCGGCGGGGCTACGTGCGACCCGA
CCCGTTCGACTCCGTCCACATCTACCCCCTCATGTGCGAGATCCTCGGGG
TGGACCCTGCGCCGAATAACGGCACCCTGGTAGAAGTATCAGATATGCTA
GCTTCAGTCGGTTGTCCGGAGGCTAGAAAATATGATTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:1086227..1088853 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95453_evm0 |
| Biotype | protein_coding |
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