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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95461_evm0 >transcript:BL95461_evm0-protein ID=transcript:BL95461_evm0-protein|Name=transcript:BL95461_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=365bp
MWAHFCVISPRLTDGNAAGVGGMKRPLSPLTDGRPAAPCPEVLVPTPLPP
ARPDAPFHPLPVMASPLRMLPLPVPPHVLPCSLWCGSPPPDHLLPPRFPF
LSTPLPLGMAFSPYLPPPLAGPVPKLSPGMGGGEARGKPRFDFANLAKAV
TEEDTSSTRQLFHGLGFPGAHRQPIPGGYTSAFVPKVDRRSARGRLPSRA
KKEFICRFCGRHFTKSYNLLIHERTHTDERPYSCDICHKAFRRQDHLRDH
KYIHSKEKPFKCSECGKGFCQSRTLAVHRTLHLQESPHKCPTCGRTFNQR
SNLKTHLLTHTDIKPYQCANCGKVFRRNCDLRRHSLTHCEETEGEAVGSP
GDNDTRSTPSPNQPQ Run BLAST on NCBI mRNA from alignment at Sc0000044:384158..386415- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95461_evm0 ID=transcript:BL95461_evm0|Name=transcript:BL95461_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2258bp|location=Sequence derived from alignment at Sc0000044:384158..386415- (Branchiostoma lanceolatum)
ATGTGGGCACATTTTTGCGTTATCAGCCCTCGGCTGACGGACGGTCAGAG
CGACAGGCGCTGGCACGGCCCCGATACCGCGCGTGTTTGGCGTGTCTGTC
CGCCATGTTCGGGCCCCGGGAGAAAACTCAGACCGTGACCTCAACTTGAC
CTGCTCTTGACATCTCCATGGCAACGGGATAATTGACCTTTCCTCCCCTG
ATATGTGGCAGGTAACGCCGCAGGTGTTGGGTTGGACTGTTCGCCTACCG
TGTACCGTGTTCTACTAACAACAGCACAGAGCGATTCATTGAGTACGCGA
AAAGCAGCAACCATATATTATAAAGTATACATGTATGACCTGTATTTGAG
TAATGACTGTAATGTATGTTTGTTTGATTGTTCGTGGCAGGTAACGCCGC
AGGTGTTGGGTTAGACTGCTCGCCTGTCGTGTACGGTGTTCTACTAACTA
CAAAACAGAGCTTTTTATAATTTTGAGTGCGCGAAAAGCATCAACCTTTA
AAGGTATACATCATGTATGACCTGCATTTGAGTAATGACTGTAATGTATG
TATGTTTGTTTGTTTGTTCGTCGCAGGTGTGGGTGGGATGAAGCGCCCCC
TGTCGCCGCTGACAGACGGCCGCCCCGCCGCCCCGTGCCCGGAGGTCCTG
GTCCCGACGCCGCTGCCGCCCGCCCGCCCGGACGCGCCGTTCCACCCGCT
CCCGGTCATGGCGTCCCCGCTCCGCATGCTGCCGCTGCCCGTCCCGCCGC
ACGTCCTGCCCTGCAGCCTGTGGTGCGGCTCCCCGCCGCCAGACCACCTC
CTCCCGCCCAGGTTCCCGTTCCTCAGCACCCCCCTGCCGCTCGGCATGGC
CTTCTCCCCGTACCTGCCGCCCCCGCTGGCCGGCCCCGTACCGAAGCTCT
CCCCGGGCATGGGCGGCGGGGAGGCCAGGGGGAAGCCGCGGTTCGACTTC
GCCAACCTCGCTAAGGCTGTGACGGAGGAGGACACTAGCAGCACCCGCCA
GCTATTCCACGGGCTCGGCTTCCCGGGAGCGCACCGCCAGCCCATCCCCG
GCGGCTACACCTCCGCTTTCGTGCCGAAGGTTGACCGCAGGTCGGCCCGG
GGCCGCCTCCCGTCCCGAGCCAAGAAGGAATTCATCTGCCGGTTCTGCGG
GCGGCACTTCACCAAGTCGTACAACCTGCTGATCCACGAGCGGACCCACA
CGGACGAGCGGCCCTACTCCTGCGACATCTGCCACAAGGCGTTCCGCAGA
CAGGACCACCTCAGGGACCACAAGTAAGTACAACAAACAAACTAACTAAC
TAACTAACTAACTAACTAACTAACTAACTAACTAACTAACTAACTAACAA
ACAAACATCTGCCACAAGGCGTTCCGCAGACAGGACCACCTCAGGGACCA
CAAGTAAGTACAACAAACAAACTAACTAACTAACTAACAAACAAACTAAC
TAACTAACTAACTAACAAACATCTGCCACAAGGCTTTCCGCAGACAGGAC
CACCTCAGGGACCACAAGTAAGTACAACAAACAAACAAACAAACAAACAA
ACTAACAAACAAACTAACAAACATCTGCCACAAGGCGTTCCGCAGACAGG
ACCACCTCAGGGACCACAAGTAAGTACAACAAACAAACAAACAAACAAAC
AAACAAACAAACAAACTAACTAACAAACATCTGCCACAAGGCTTTCCGCA
GGCAGGACCACCTCAGGGACCACAAGTAAGTGCAACAAACAAACTAACAT
ACAAACAAACAAACATCTGTCATAGGCCTGATTATCAGACTACGTAATCA
TCTTTATCCTTCTGTGTACTTGCTTTGAGTAGTGTAGGGAGGGTTTGGGT
TTGGGTTTGGATGTGGTCAACTTTGCCCTCTAATAAGTAGAGTTGTTTCT
TTACTCCTCCAGGTACATCCATTCCAAGGAGAAGCCGTTTAAGTGCAGCG
AGTGCGGGAAGGGCTTCTGCCAGTCGCGGACTCTGGCCGTGCACAGGACG
CTGCACCTGCAGGAGTCGCCCCACAAGTGCCCCACCTGCGGGCGCACCTT
CAACCAGCGCAGCAACCTGAAGACGCACCTGCTGACGCACACGGACATCA
AGCCGTACCAGTGCGCCAACTGCGGCAAGGTGTTCCGGCGGAACTGCGAC
CTGCGCAGGCACAGCCTCACGCACTGCGAGGAGACCGAGGGGGAGGCTGT
GGGGTCACCTGGGGACAATGACACCAGGTCAACTCCCAGCCCGAACCAGC
CGCAATGA Coding sequence (CDS) from alignment at Sc0000044:384158..386415- >transcript:BL95461_evm0 ID=transcript:BL95461_evm0|Name=transcript:BL95461_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=5490bp|location=Sequence derived from alignment at Sc0000044:384158..386415- (Branchiostoma lanceolatum)
ATGTGGGCACATTTTTGCGTTATCAGCCCTCGGCTGACGGACGGTAACGC
CGCAGGTGTGGGTGGGATGAAGCGCCCCCTGTCGCCGCTGACAGACGGCC
GCCCCGCCGCCCCGTGCCCGGAGGTCCTGGTCCCGACGCCGCTGCCGCCC
GCCCGCCCGGACGCGCCGTTCCACCCGCTCCCGGTCATGGCGTCCCCGCT
CCGCATGCTGCCGCTGCCCGTCCCGCCGCACGTCCTGCCCTGCAGCCTGT
GGTGCGGCTCCCCGCCGCCAGACCACCTCCTCCCGCCCAGGTTCCCGTTC
CTCAGCACCCCCCTGCCGCTCGGCATGGCCTTCTCCCCGTACCTGCCGCC
CCCGCTGGCCGGCCCCGTACCGAAGCTCTCCCCGGGCATGGGCGGCGGGG
AGGCCAGGGGGAAGCCGCGGTTCGACTTCGCCAACCTCGCTAAGGCTGTG
ACGGAGGAGGACACTAGCAGCACCCGCCAGCTATTCCACGGGCTCGGCTT
CCCGGGAGCGCACCGCCAGCCCATCCCCGGCGGCTACACCTCCGCTTTCG
TGCCGAAGGTTGACCGCAGGTCGGCCCGGGGCCGCCTCCCGTCCCGAGCC
AAGAAGGAATTCATCTGCCGGTTCTGCGGGCGGCACTTCACCAAGTCGTA
CAACCTGCTGATCCACGAGCGGACCCACACGGACGAGCGGCCCTACTCCT
GCGACATCTGCCACAAGGCTTTCCGCAGGCAGGACCACCTCAGGGACCAC
AAGTACATCCATTCCAAGGAGAAGCCGTTTAAGTGCAGCGAGTGCGGGAA
GGGCTTCTGCCAGTCGCGGACTCTGGCCGTGCACAGGACGCTGCACCTGC
AGGAGTCGCCCCACAAGTGCCCCACCTGCGGGCGCACCTTCAACCAGCGC
AGCAACCTGAAGACGCACCTGCTGACGCACACGGACATCAAGCCGTACCA
GTGCGCCAACTGCGGCAAGGTGTTCCGGCGGAACTGCGACCTGCGCAGGC
ACAGCCTCACGCACTGCGAGGAGACCGAGGGGGAGGCTGTGGGGTCACCT
GGGGACAATGACACCAGGTCAACTCCCAGCCCGAACCAGCCGCAATGAAT
GTGGGCACATTTTTGCGTTATCAGCCCTCGGCTGACGGACGGTAACGCCG
CAGGTGTGGGTGGGATGAAGCGCCCCCTGTCGCCGCTGACAGACGGCCGC
CCCGCCGCCCCGTGCCCGGAGGTCCTGGTCCCGACGCCGCTGCCGCCCGC
CCGCCCGGACGCGCCGTTCCACCCGCTCCCGGTCATGGCGTCCCCGCTCC
GCATGCTGCCGCTGCCCGTCCCGCCGCACGTCCTGCCCTGCAGCCTGTGG
TGCGGCTCCCCGCCGCCAGACCACCTCCTCCCGCCCAGGTTCCCGTTCCT
CAGCACCCCCCTGCCGCTCGGCATGGCCTTCTCCCCGTACCTGCCGCCCC
CGCTGGCCGGCCCCGTACCGAAGCTCTCCCCGGGCATGGGCGGCGGGGAG
GCCAGGGGGAAGCCGCGGTTCGACTTCGCCAACCTCGCTAAGGCTGTGAC
GGAGGAGGACACTAGCAGCACCCGCCAGCTATTCCACGGGCTCGGCTTCC
CGGGAGCGCACCGCCAGCCCATCCCCGGCGGCTACACCTCCGCTTTCGTG
CCGAAGGTTGACCGCAGGTCGGCCCGGGGCCGCCTCCCGTCCCGAGCCAA
GAAGGAATTCATCTGCCGGTTCTGCGGGCGGCACTTCACCAAGTCGTACA
ACCTGCTGATCCACGAGCGGACCCACACGGACGAGCGGCCCTACTCCTGC
GACATCTGCCACAAGGCTTTCCGCAGGCAGGACCACCTCAGGGACCACAA
GTACATCCATTCCAAGGAGAAGCCGTTTAAGTGCAGCGAGTGCGGGAAGG
GCTTCTGCCAGTCGCGGACTCTGGCCGTGCACAGGACGCTGCACCTGCAG
GAGTCGCCCCACAAGTGCCCCACCTGCGGGCGCACCTTCAACCAGCGCAG
CAACCTGAAGACGCACCTGCTGACGCACACGGACATCAAGCCGTACCAGT
GCGCCAACTGCGGCAAGGTGTTCCGGCGGAACTGCGACCTGCGCAGGCAC
AGCCTCACGCACTGCGAGGAGACCGAGGGGGAGGCTGTGGGGTCACCTGG
GGACAATGACACCAGGTCAACTCCCAGCCCGAACCAGCCGCAATGAATGT
GGGCACATTTTTGCGTTATCAGCCCTCGGCTGACGGACGGTAACGCCGCA
GGTGTGGGTGGGATGAAGCGCCCCCTGTCGCCGCTGACAGACGGCCGCCC
CGCCGCCCCGTGCCCGGAGGTCCTGGTCCCGACGCCGCTGCCGCCCGCCC
GCCCGGACGCGCCGTTCCACCCGCTCCCGGTCATGGCGTCCCCGCTCCGC
ATGCTGCCGCTGCCCGTCCCGCCGCACGTCCTGCCCTGCAGCCTGTGGTG
CGGCTCCCCGCCGCCAGACCACCTCCTCCCGCCCAGGTTCCCGTTCCTCA
GCACCCCCCTGCCGCTCGGCATGGCCTTCTCCCCGTACCTGCCGCCCCCG
CTGGCCGGCCCCGTACCGAAGCTCTCCCCGGGCATGGGCGGCGGGGAGGC
CAGGGGGAAGCCGCGGTTCGACTTCGCCAACCTCGCTAAGGCTGTGACGG
AGGAGGACACTAGCAGCACCCGCCAGCTATTCCACGGGCTCGGCTTCCCG
GGAGCGCACCGCCAGCCCATCCCCGGCGGCTACACCTCCGCTTTCGTGCC
GAAGGTTGACCGCAGGTCGGCCCGGGGCCGCCTCCCGTCCCGAGCCAAGA
AGGAATTCATCTGCCGGTTCTGCGGGCGGCACTTCACCAAGTCGTACAAC
CTGCTGATCCACGAGCGGACCCACACGGACGAGCGGCCCTACTCCTGCGA
CATCTGCCACAAGGCTTTCCGCAGGCAGGACCACCTCAGGGACCACAAGT
ACATCCATTCCAAGGAGAAGCCGTTTAAGTGCAGCGAGTGCGGGAAGGGC
TTCTGCCAGTCGCGGACTCTGGCCGTGCACAGGACGCTGCACCTGCAGGA
GTCGCCCCACAAGTGCCCCACCTGCGGGCGCACCTTCAACCAGCGCAGCA
ACCTGAAGACGCACCTGCTGACGCACACGGACATCAAGCCGTACCAGTGC
GCCAACTGCGGCAAGGTGTTCCGGCGGAACTGCGACCTGCGCAGGCACAG
CCTCACGCACTGCGAGGAGACCGAGGGGGAGGCTGTGGGGTCACCTGGGG
ACAATGACACCAGGTCAACTCCCAGCCCGAACCAGCCGCAATGAATGTGG
GCACATTTTTGCGTTATCAGCCCTCGGCTGACGGACGGTAACGCCGCAGG
TGTGGGTGGGATGAAGCGCCCCCTGTCGCCGCTGACAGACGGCCGCCCCG
CCGCCCCGTGCCCGGAGGTCCTGGTCCCGACGCCGCTGCCGCCCGCCCGC
CCGGACGCGCCGTTCCACCCGCTCCCGGTCATGGCGTCCCCGCTCCGCAT
GCTGCCGCTGCCCGTCCCGCCGCACGTCCTGCCCTGCAGCCTGTGGTGCG
GCTCCCCGCCGCCAGACCACCTCCTCCCGCCCAGGTTCCCGTTCCTCAGC
ACCCCCCTGCCGCTCGGCATGGCCTTCTCCCCGTACCTGCCGCCCCCGCT
GGCCGGCCCCGTACCGAAGCTCTCCCCGGGCATGGGCGGCGGGGAGGCCA
GGGGGAAGCCGCGGTTCGACTTCGCCAACCTCGCTAAGGCTGTGACGGAG
GAGGACACTAGCAGCACCCGCCAGCTATTCCACGGGCTCGGCTTCCCGGG
AGCGCACCGCCAGCCCATCCCCGGCGGCTACACCTCCGCTTTCGTGCCGA
AGGTTGACCGCAGGTCGGCCCGGGGCCGCCTCCCGTCCCGAGCCAAGAAG
GAATTCATCTGCCGGTTCTGCGGGCGGCACTTCACCAAGTCGTACAACCT
GCTGATCCACGAGCGGACCCACACGGACGAGCGGCCCTACTCCTGCGACA
TCTGCCACAAGGCTTTCCGCAGGCAGGACCACCTCAGGGACCACAAGTAC
ATCCATTCCAAGGAGAAGCCGTTTAAGTGCAGCGAGTGCGGGAAGGGCTT
CTGCCAGTCGCGGACTCTGGCCGTGCACAGGACGCTGCACCTGCAGGAGT
CGCCCCACAAGTGCCCCACCTGCGGGCGCACCTTCAACCAGCGCAGCAAC
CTGAAGACGCACCTGCTGACGCACACGGACATCAAGCCGTACCAGTGCGC
CAACTGCGGCAAGGTGTTCCGGCGGAACTGCGACCTGCGCAGGCACAGCC
TCACGCACTGCGAGGAGACCGAGGGGGAGGCTGTGGGGTCACCTGGGGAC
AATGACACCAGGTCAACTCCCAGCCCGAACCAGCCGCAATGAATGTGGGC
ACATTTTTGCGTTATCAGCCCTCGGCTGACGGACGGTAACGCCGCAGGTG
TGGGTGGGATGAAGCGCCCCCTGTCGCCGCTGACAGACGGCCGCCCCGCC
GCCCCGTGCCCGGAGGTCCTGGTCCCGACGCCGCTGCCGCCCGCCCGCCC
GGACGCGCCGTTCCACCCGCTCCCGGTCATGGCGTCCCCGCTCCGCATGC
TGCCGCTGCCCGTCCCGCCGCACGTCCTGCCCTGCAGCCTGTGGTGCGGC
TCCCCGCCGCCAGACCACCTCCTCCCGCCCAGGTTCCCGTTCCTCAGCAC
CCCCCTGCCGCTCGGCATGGCCTTCTCCCCGTACCTGCCGCCCCCGCTGG
CCGGCCCCGTACCGAAGCTCTCCCCGGGCATGGGCGGCGGGGAGGCCAGG
GGGAAGCCGCGGTTCGACTTCGCCAACCTCGCTAAGGCTGTGACGGAGGA
GGACACTAGCAGCACCCGCCAGCTATTCCACGGGCTCGGCTTCCCGGGAG
CGCACCGCCAGCCCATCCCCGGCGGCTACACCTCCGCTTTCGTGCCGAAG
GTTGACCGCAGGTCGGCCCGGGGCCGCCTCCCGTCCCGAGCCAAGAAGGA
ATTCATCTGCCGGTTCTGCGGGCGGCACTTCACCAAGTCGTACAACCTGC
TGATCCACGAGCGGACCCACACGGACGAGCGGCCCTACTCCTGCGACATC
TGCCACAAGGCTTTCCGCAGGCAGGACCACCTCAGGGACCACAAGTACAT
CCATTCCAAGGAGAAGCCGTTTAAGTGCAGCGAGTGCGGGAAGGGCTTCT
GCCAGTCGCGGACTCTGGCCGTGCACAGGACGCTGCACCTGCAGGAGTCG
CCCCACAAGTGCCCCACCTGCGGGCGCACCTTCAACCAGCGCAGCAACCT
GAAGACGCACCTGCTGACGCACACGGACATCAAGCCGTACCAGTGCGCCA
ACTGCGGCAAGGTGTTCCGGCGGAACTGCGACCTGCGCAGGCACAGCCTC
ACGCACTGCGAGGAGACCGAGGGGGAGGCTGTGGGGTCACCTGGGGACAA
TGACACCAGGTCAACTCCCAGCCCGAACCAGCCGCAATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000044 | genome | Sc0000044:384158..386415 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95461_evm0 |
| Biotype | protein_coding |
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