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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95463_evm1 >transcript:BL95463_evm1-protein ID=transcript:BL95463_evm1-protein|Name=transcript:BL95463_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=175bp
MASKTQVRLPKVSGEAFAQKEFPFTNLVMEGGGAKGIAYVGAVKILEDAG
IMKNIKRFAGTSAGAITAAMLAVGMTSEEIKKELSEVDMLRVVIDGGGPL
PGVFKKVGLAFNVVCSAGANPGDRFLDWMGKILEKYLAKHNHKDLGKDVT
FHQLYHAFGHELCIVAYNVQYAQET Run BLAST on NCBI mRNA from alignment at Sc0000044:1231510..1235079- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95463_evm1 ID=transcript:BL95463_evm1|Name=transcript:BL95463_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3570bp|location=Sequence derived from alignment at Sc0000044:1231510..1235079- (Branchiostoma lanceolatum)
ATGGCATCCAAGACGCAGGTGAGACTCCCGAAGGTGAGCGGAGAAGCCTT
CGCGCAGAAGGAGTTCCCGTTTACTAACCTGGTCATGGAAGGGGGAGGGG
CAAAGGGCATAGCCTACGTCGGCGCAGTCAAGGTGAGGACATTTTTTGTT
TTGCGAAGTTTCTGATTTGAGTTTCTTGACTTCGACTGAACTACTTACTT
GTTGTGACTTCTAGCCTTTTTCAACGTTTTAATGGTCAGTTACATCGACA
CGGTCACAAAATAAGTCTGCAACACATTAAATTCTGAAAGAGTGTCAACG
TATCTTATCATTTGAATGTTTACGCCTCTAACACCTTTTTAGTCTTCGTA
TCGTTAGTTGTATCGCATATAATTGTGACATTTAGATTTGTATATACAAG
TAACAGCCCTGACCGCAAAAATTGTACTTCGATTTGAAAATCACACGTTA
CGGTAGTAAAAATCAACAGTTATGTCTATTATCATTATTTTCACAAATTT
CTTGTCTTTTGCAATTTTTTCACTTTCCATCCAATATTTTTTAATCTACA
AGTACCAAAGCATTAAATAAAAGAGAAAGGCGTATGATAAGTATTGAACT
TCGAGGCAGATAAAAGGGATACTTCACATGTGTATGGAAAATTCATTTAT
TAATTCTATAGCTATGTTTGTTGCTTGCTTGTTCGTTCGCTTGCCTGTTT
GTGTGTTTGTTTACAGATTCTGGAGGACGCCGGCATCATGAAGAACATCA
AACGGTTCGCCGGCACCAGCGCAGGCGCAATCACGGCCGCCATGTTGGCT
GTGGGGATGACGTCAGAGGAGATAAAGAAGGAGCTGAGTGAAGTGGACAT
GCTGAGGGTCGTGATCGGTGAGATTTAAAGGAGTCCTAAACTCCAGAAGG
CGGTGTTATTTTCCACTAGATTATGTATCAATCAATACATAATCAGCCGA
ATTTGTACAGAATTCCGCTTGTGGTGAATTACACAAGGTGTGTTTTTTAC
AACAATATTATACTCACTAAACCCATGCAGGCCCTACCAGTGAATTCCCT
ATGCGTAAACATACATTTTTAAACTAGGATATTTTCGGCGTAAATGAGGG
TGGTAAAGCACAATAAGAAGGCCAATTGTTAATAAGATAATAGAACACAT
AGCAAGACGAGTTTTTCTTAATCACCCTGACATTCTTTTTGTAATCTAAC
TTTTGTCAGGCATTGTCAGGCACATTGTAAAAAAACACATAGGCCGAGGG
TCACCTGGGGAATTTGGTAGAATACTGAATGCTTTTGGATGCGCACGGGA
CTAGTGGGTACTTTATCGTATACTGTAAAAAATATTCATTTTTACTTCCT
AAAATTACCATCCATTGGAAACTAACTCCCCCCTCTGGAGTTAAGGACTC
CTTTAAGAAACGTAATGAATAAAATTTGTTCTCGTGTATTATTATTTCTG
AACTTCGGGTAAATTTGCCTTGTATGAGCTGGGCGAATCCAACAAATGTA
ACCAATAGCAGAATTTGTTTTCCCTGCACAGTTCTCAAACGTTACAAAGA
AACAAAGCCAAGGATAAAAAGTGCGAAAAATTCAGAATGTCTAACTACAT
CCCGGAATTCAATTGATGGTTGATGTTTTGTTTGCTTTTAAAATGAAGAG
GAAGAGGGCGATAGAGGTAGACAGAGCGAGGAAAGATAGATACGAGTACG
GTGCATGTTTTCCAGCTAGCTTAGAAAGTAGATAGATATATTCATTCATT
CGTCGCTCGTTCTCATTTAAATGTACACATTTTGTAATCTCCGTTACAAT
TAAAAGTAAGACGTTCCTGACATTAAGATATGGCACATATAATGTATCAA
ACTGCGGTTTTTAAAAGCTAGAAAAGTTTTAAGTCGTCGAGAAAACTACA
ATTTGACATCGTATATGTGGCATGTCGTAATGCCAGGAACGTCTTATTTC
AATCGGTAACGGAGATTACAAAATGTGTATATTGAATGAAGAACTTTATT
GCGCGACCATTGTAGCAGGTACAAAGTATGGCAACAACAGTAAACATAGA
ACAAGACATGAGTATGGAATAAAACTATTCACTACATCAAAATGACTATC
TTAGGTTTTACATGATTCAAGTTTTCTAATTTTGAGTATCATTATTTTTT
CTAATAACAAAACAATCTTTTATATATTTGCCTATTTTAACACTGTATGA
GCTGTTGCATCTAAATATATAGTCAAATCTATCTGTGGCATTGAGTGTCT
TAAAATTGAGACGAGCGTCTTGTCCGTTTCCCCCAGACGGCGGCGGTCCC
CTCCCGGGCGTGTTTAAGAAGGTTGGGTTGGCGTTCAACGTAGTCTGTTC
CGCCGGCGCGAACCCGGGGGACAGGTTCCTGGACTGGATGGGCAAAATCC
TGGAGAAATACCTGGCAAAACACAACCACAAGGACCTAGGAAAGGACGTC
ACGTTTCATCAGGTCAATGTTTGTTCGTTTTTCTCTTAAAATTGCAAGAA
ACGCAATACAGAGGGGACTAAGGCATACATGCAAGAACCTGGCAAAACAC
AACCACAAGGACCTCGGAAAGGACGTCACGTTTTATCAGGTTACTGCTTG
TTTGTTCGTTTTTCTCTTAAAATTGCATGGAAAGCAATACAGAGGTGACC
AAGGCATACATGCAAGTACCTGGCAAAACACAGAAACAAGGACCTCGGAA
AGGACGTCACGTTTCATCAGGTTACTGCTTTTTTGTTTGTTTTTCTCTTA
AAATTGCATGGAAAGCAATACAGAGGTGACCAAGGCATACATGTAAGTAC
CTGGCGAAACACAGAAACAAGGACCTGGGAAAGGAAGTCACCTTTTCGCA
GGTTAATTTTGGTTTCTTTATCTATTCTATTTCATTTTATTAAACAAGAC
CCCCACATACATCATTCAACAAAGCCTACAGCCAGGACTTCGCTACCCCC
AGAGCCAGGGAAAAATCAGCTAAGCCATGGAAAGACCGAATTGAAAGGGA
AATTGGATTAAACGTACGGGTTGTGGAGGCTATGGTATGGGACAGGGCTT
CCTGGGGGGAACCTTTTTGAGAGTAAGGGGACAGTTACTGGTCTGATCAC
TTAGGGCAGGTAGGTATTGAAATTGAGGGTTACACTTTTTTTCATGTAAT
TGCAGAAACGCATTACAGAGATCACCAAGTCATCCTTAAGAAGTACCTGG
CTGGTAATAAAAAAGGAGCTGGGAAAGGACGTCACATTACTTATGTTACA
TGTACAATGAAGTAATCTCCAAGCAGATCCACACCGGGCGCGAAAATCGT
ATATGCTAGCCAGAGAAGGTCCAGTCAGCCAGAGAGGGTCCAATCAGCCC
GGTACCATCTATGGCTGACTGGACCTTCTCTGGCTAGCTGCTAGCATACA
CGATTTTCGCGCCCGGTGTGGATCTGCTTGGAAATTACAATGAAGGCCTT
TCTTAGATGAAAAGGGAAATGATAGTCAAGTTACCCCTTCCTGTTCTGTA
GCTGTACCACGCTTTCGGCCATGAGCTGTGTATCGTGGCTTACAACGTGC
AGTACGCGCAGGAAACGTAA Coding sequence (CDS) from alignment at Sc0000044:1231510..1235079- >transcript:BL95463_evm1 ID=transcript:BL95463_evm1|Name=transcript:BL95463_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=2112bp|location=Sequence derived from alignment at Sc0000044:1231510..1235079- (Branchiostoma lanceolatum)
ATGGCATCCAAGACGCAGGTGAGACTCCCGAAGGTGAGCGGAGAAGCCTT
CGCGCAGAAGGAGTTCCCGTTTACTAACCTGGTCATGGAAGGGGGAGGGG
CAAAGGGCATAGCCTACGTCGGCGCAGTCAAGATTCTGGAGGACGCCGGC
ATCATGAAGAACATCAAACGGTTCGCCGGCACCAGCGCAGGCGCAATCAC
GGCCGCCATGTTGGCTGTGGGGATGACGTCAGAGGAGATAAAGAAGGAGC
TGAGTGAAGTGGACATGCTGAGGGTCGTGATCGACGGCGGCGGTCCCCTC
CCGGGCGTGTTTAAGAAGGTTGGGTTGGCGTTCAACGTAGTCTGTTCCGC
CGGCGCGAACCCGGGGGACAGGTTCCTGGACTGGATGGGCAAAATCCTGG
AGAAATACCTGGCAAAACACAACCACAAGGACCTAGGAAAGGACGTCACG
TTTCATCAGCTGTACCACGCTTTCGGCCATGAGCTGTGTATCGTGGCTTA
CAACGTGCAGTACGCGCAGGAAACGTAAATGGCATCCAAGACGCAGGTGA
GACTCCCGAAGGTGAGCGGAGAAGCCTTCGCGCAGAAGGAGTTCCCGTTT
ACTAACCTGGTCATGGAAGGGGGAGGGGCAAAGGGCATAGCCTACGTCGG
CGCAGTCAAGATTCTGGAGGACGCCGGCATCATGAAGAACATCAAACGGT
TCGCCGGCACCAGCGCAGGCGCAATCACGGCCGCCATGTTGGCTGTGGGG
ATGACGTCAGAGGAGATAAAGAAGGAGCTGAGTGAAGTGGACATGCTGAG
GGTCGTGATCGACGGCGGCGGTCCCCTCCCGGGCGTGTTTAAGAAGGTTG
GGTTGGCGTTCAACGTAGTCTGTTCCGCCGGCGCGAACCCGGGGGACAGG
TTCCTGGACTGGATGGGCAAAATCCTGGAGAAATACCTGGCAAAACACAA
CCACAAGGACCTAGGAAAGGACGTCACGTTTCATCAGCTGTACCACGCTT
TCGGCCATGAGCTGTGTATCGTGGCTTACAACGTGCAGTACGCGCAGGAA
ACGTAAATGGCATCCAAGACGCAGGTGAGACTCCCGAAGGTGAGCGGAGA
AGCCTTCGCGCAGAAGGAGTTCCCGTTTACTAACCTGGTCATGGAAGGGG
GAGGGGCAAAGGGCATAGCCTACGTCGGCGCAGTCAAGATTCTGGAGGAC
GCCGGCATCATGAAGAACATCAAACGGTTCGCCGGCACCAGCGCAGGCGC
AATCACGGCCGCCATGTTGGCTGTGGGGATGACGTCAGAGGAGATAAAGA
AGGAGCTGAGTGAAGTGGACATGCTGAGGGTCGTGATCGACGGCGGCGGT
CCCCTCCCGGGCGTGTTTAAGAAGGTTGGGTTGGCGTTCAACGTAGTCTG
TTCCGCCGGCGCGAACCCGGGGGACAGGTTCCTGGACTGGATGGGCAAAA
TCCTGGAGAAATACCTGGCAAAACACAACCACAAGGACCTAGGAAAGGAC
GTCACGTTTCATCAGCTGTACCACGCTTTCGGCCATGAGCTGTGTATCGT
GGCTTACAACGTGCAGTACGCGCAGGAAACGTAAATGGCATCCAAGACGC
AGGTGAGACTCCCGAAGGTGAGCGGAGAAGCCTTCGCGCAGAAGGAGTTC
CCGTTTACTAACCTGGTCATGGAAGGGGGAGGGGCAAAGGGCATAGCCTA
CGTCGGCGCAGTCAAGATTCTGGAGGACGCCGGCATCATGAAGAACATCA
AACGGTTCGCCGGCACCAGCGCAGGCGCAATCACGGCCGCCATGTTGGCT
GTGGGGATGACGTCAGAGGAGATAAAGAAGGAGCTGAGTGAAGTGGACAT
GCTGAGGGTCGTGATCGACGGCGGCGGTCCCCTCCCGGGCGTGTTTAAGA
AGGTTGGGTTGGCGTTCAACGTAGTCTGTTCCGCCGGCGCGAACCCGGGG
GACAGGTTCCTGGACTGGATGGGCAAAATCCTGGAGAAATACCTGGCAAA
ACACAACCACAAGGACCTAGGAAAGGACGTCACGTTTCATCAGCTGTACC
ACGCTTTCGGCCATGAGCTGTGTATCGTGGCTTACAACGTGCAGTACGCG
CAGGAAACGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000044 | genome | Sc0000044:1231510..1235079 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95463_evm1 |
| Biotype | protein_coding |
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