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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95471_evm0 >transcript:BL95471_evm0-protein ID=transcript:BL95471_evm0-protein|Name=transcript:BL95471_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=214bp
MLTFVAIALLLGATIADPVEDYNPSPCCVPKQWSGTLGSVTGSVSGGKPS
TMNQTIMEFYDYDKMKVALVGNGFRTVEDYNKGVSYSIVSNQCTTSKLAN
SLFNCIPANATFLGSYQYGGPKGLKVNDYSIDSFSPGLIGRISFTAGSCL
PVLETVIHGGTDAYIGAIGFVNIVPSIKDPSVFDVPSPPCPKDTDLNNFV
DMPKRQGSIFARLP Run BLAST on NCBI mRNA from alignment at Sc0000045:1342684..1345923- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95471_evm0 ID=transcript:BL95471_evm0|Name=transcript:BL95471_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=3240bp|location=Sequence derived from alignment at Sc0000045:1342684..1345923- (Branchiostoma lanceolatum)
ATGTTGACCTTCGTGGCAATCGGTAAGAATGATTTGATTTTTCTTTCATG
AAGGGATCTCCTTGTAAGAATATAACTATGTTGCCTCAATGATATCCTTC
GACCCTACAACGTACAGATATGTATCTTAGCTTCATAAGGTATATGTGTT
GTTGTTTTTTCCAAGCTCTATTGCTAGGGGCAACGATCGCAGACCCGGTT
GAAGACTACAACCCCAGCCCTTGCTGTGTACCAAAGCAGTGGTCTGGGAC
GTTGGGTAGTGTCACTGGCTCAGTAAGCGGTGGGAAACCATGTAAGATAT
TTAACATTCTTGTTTGGCGACGCCTCAGGGGCGAGCCTAATGGCATAGTA
TTGTGTGCAGTCTGCACGAATTCTACGAATTGTACAGGAATTTGTCCACA
GGAATTTCTGTCCATAGGAAGTATTTTAGGAATTGTATGGTAGAAAGTGG
GTCATGCTGTCTCACGGGGGCATTTGTCCTAGAAAACTGGGACAGTTGCC
CACAGGTGTCCACCAGATGTAGTAATTATAAGTTCAGTTGTATACAGGGA
AACTTTGCATATTTCATCACTTGGATGTTTTGTTTAACTTTATGCTGCCT
GAAGTAGTCATTCATAACAACAACATGGCGACCTGAGCAGAATCCAATAT
GTCTTATAATGTGGGTGGGGGTATTAATTAGGCCAATTCCTTTTGACAAG
TTTCTTGCTCTCTCGGAAGTAAATTGGGATATTTAGGTAAAAATCCAGGA
AATGACGAAATTTGAAGATTTGAAATAGCCATTTGTTAATCCTACAGCGA
CAATGAACCAGACCATCATGGAGTTTTATGATTATGACAAGATGAAAGTG
GCACTGGTGGGGAACGGCTTCAGGACTGTTGAAGACTACAACAAGGTCGG
TCCGTCCATGTTTGGTACCTTGTTTTCGAATGTTCTCCTTCACAAAAATA
ACGTGGTGTAGCGAGATTTGAACAAATAACGTTGGATAGTTTTTTAAGTT
AAAGCCATGTATTCTATCACCAACACATTTTTTTCATTTTTATTCGTATA
GGGAGTGTCATATTCAATAGTTTCAAACCAGTGCACCACGAGCAAGTTGG
CCAATTCTTTGTTCAACTGCATCCCTGGTAAGTGAAACGGAATGTCATAA
GAAATAAATGTGATAGTTATCTCTATGTGATAGTTATAGTATAACTTGAA
CCATACGTTGCAGAAGACAGTGCTATTTTTTTTTTGATAATTATTTTAAA
GGACACTCTTTTTTCGAAACTTAATGATGAACCCGAAATAAGATATTAAA
AAATTACTTTATATATAATCTAATCATATGTTTAAGTAAACGTTTGTAGA
TTAGCCCTCAAAACTGACACTTTTCACCCCATGCAATAGCTAATGCCACA
TTTCTGGGATCGTACCAATACGGCGGCCCAAAGGGACTGAAAGTAAACGA
CTACTCAATCGACTCTTTTTCCCCTGGTCTCATCGGGAGGATTTCTTTCA
CCGCTGGCAGCTGTCTTCCGGTTCTGGAGACCGTAATTCATGGCGGAACT
GGTAAGAAATATCTTTGTATCCCGTCTTATTTTCTACAAGGAGCAATACA
GTAATACAGCCCGACCTTTAACTATTGATTAAGATAAGATCGTTGACACT
TCCGAGTGCGTACGTGCAGCGACATGAATTGTGGGTAATATGTCAAAGGT
GACGACCCCTGACACATAAAAAAACGCGTCTGGACATTGTTATGCAAATC
GAGACAATAGTCGAGACGAGAGCAGCTGACATGTTACCCACAAATCCTAT
CGCTGCGCATGCGTACTCGGAAGTATGAATGACCTTGATTATCAGAAATA
AGAATTTATCTGTAACATTGTATAACGATTTAAACAGTCGCTAACATGTT
CAGAGTATTAAGATTCATTTGTTACTTTGTTGTTTTCTTCTTTGAAAATT
ACATTTATATTCATCACATGACGCTTCCCTCGTTCGATTGTTTTAATTTT
TCTTGGCCGTTCTACTCAGAAAGTACCACAATATATAATGACATAGTCGT
CAGGGCATGACTTGAACAATGTTTTATATTTTCTATGTTTATACTCTGTA
GATGCGTATATTGGTGCCATTGGATTCGTCAACATTGTCCCGTCGATTAA
GGACCCTTCCGTGTTCGATGTACCCAGTCCACCGTGCCCAAAGGACACAG
ATCTTAACAACTTTGTGGTAAGAAATGTAGAATACAACACGGGGTGCCAG
CCCTCCCGCGGGCAGGATCGACTGACGCTCGTAGGCCGGAGGGCGATCCG
ACCTGCGGGAGGGCTTGGACCGAGGGTGATGCGGAGTACACCGCGTTGTA
TCTTATTCATGTCATACCCACCCGAGAAAACATATTTCAATACGGAATAC
ACCAGAAGTTGAGGGAGTTTTGTGAAAAACTGTAACAACACTTATTCCAA
CCTCCGAATCCGGTATTCGAATTTTCGACGGCGACGCAACCGGCGCGCTC
GAACTGCATACTAAATATTGTATTGAAGCCCGTGTGATACAAGTAGAAAC
CTGTGTGATACGGGAAATTATCACACGATGTGGAACACTTGTATCGAACG
TTTTCGCGGCCCAGGTATGACATAACATCACTTACTGAATAGGCCTATAC
ATATACAAGATTATTCTTAAAGTGAATTTTTGTGAGTATTCTTTCGATAA
GAAGTATAAGATGTGACGTCACAGCCACCATGTTGGTTAATTTGTTAAAC
CTGGAAGGGTCAGACCTGTGAGATGCATGTTTATAATGTATTTACACGTG
ACGTCACAGCAGCCATGTTAGTTGGTTAAACCTGGAAGAGTAAGACCTTT
GAGATGTATGTTTATAATGTGTTTGCAAATGAATGTATTTACGTATCTAC
AAATTCAAATTTACCTAGTTAACCTTCAAGTTCAACCAACCAGCATAGTG
GATAATACTTACGTCATAAATGTATACGTCAATGTCACGTGAGTGCAAAA
ATGCTGTATATCTATCGTACAGTTGTTGCCTGTCCTAGCCCATGAATTAG
TACCGTGTACAACGTTTTAAAGCAGTGTTTGATAGTGTTGTGACTTTATA
CTTTATTTCTCGATGTGCACTCATTTTTTCAGAGATTTACATGTACCATA
CAATGGATGTCGTTTTACCGATTGCTCTCAATTCTGTTCTTACAGGACAT
GCCAAAGAGGCAAGGATCCATCTTTGCTCGTCTGCCCTGA Coding sequence (CDS) from alignment at Sc0000045:1342684..1345923- >transcript:BL95471_evm0 ID=transcript:BL95471_evm0|Name=transcript:BL95471_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=4515bp|location=Sequence derived from alignment at Sc0000045:1342684..1345923- (Branchiostoma lanceolatum)
ATGTTGACCTTCGTGGCAATCGCTCTATTGCTAGGGGCAACGATCGCAGA
CCCGGTTGAAGACTACAACCCCAGCCCTTGCTGTGTACCAAAGCAGTGGT
CTGGGACGTTGGGTAGTGTCACTGGCTCAGTAAGCGGTGGGAAACCATCG
ACAATGAACCAGACCATCATGGAGTTTTATGATTATGACAAGATGAAAGT
GGCACTGGTGGGGAACGGCTTCAGGACTGTTGAAGACTACAACAAGGGAG
TGTCATATTCAATAGTTTCAAACCAGTGCACCACGAGCAAGTTGGCCAAT
TCTTTGTTCAACTGCATCCCTGCTAATGCCACATTTCTGGGATCGTACCA
ATACGGCGGCCCAAAGGGACTGAAAGTAAACGACTACTCAATCGACTCTT
TTTCCCCTGGTCTCATCGGGAGGATTTCTTTCACCGCTGGCAGCTGTCTT
CCGGTTCTGGAGACCGTAATTCATGGCGGAACTGATGCGTATATTGGTGC
CATTGGATTCGTCAACATTGTCCCGTCGATTAAGGACCCTTCCGTGTTCG
ATGTACCCAGTCCACCGTGCCCAAAGGACACAGATCTTAACAACTTTGTG
GACATGCCAAAGAGGCAAGGATCCATCTTTGCTCGTCTGCCCTGAATGTT
GACCTTCGTGGCAATCGCTCTATTGCTAGGGGCAACGATCGCAGACCCGG
TTGAAGACTACAACCCCAGCCCTTGCTGTGTACCAAAGCAGTGGTCTGGG
ACGTTGGGTAGTGTCACTGGCTCAGTAAGCGGTGGGAAACCATCGACAAT
GAACCAGACCATCATGGAGTTTTATGATTATGACAAGATGAAAGTGGCAC
TGGTGGGGAACGGCTTCAGGACTGTTGAAGACTACAACAAGGGAGTGTCA
TATTCAATAGTTTCAAACCAGTGCACCACGAGCAAGTTGGCCAATTCTTT
GTTCAACTGCATCCCTGCTAATGCCACATTTCTGGGATCGTACCAATACG
GCGGCCCAAAGGGACTGAAAGTAAACGACTACTCAATCGACTCTTTTTCC
CCTGGTCTCATCGGGAGGATTTCTTTCACCGCTGGCAGCTGTCTTCCGGT
TCTGGAGACCGTAATTCATGGCGGAACTGATGCGTATATTGGTGCCATTG
GATTCGTCAACATTGTCCCGTCGATTAAGGACCCTTCCGTGTTCGATGTA
CCCAGTCCACCGTGCCCAAAGGACACAGATCTTAACAACTTTGTGGACAT
GCCAAAGAGGCAAGGATCCATCTTTGCTCGTCTGCCCTGAATGTTGACCT
TCGTGGCAATCGCTCTATTGCTAGGGGCAACGATCGCAGACCCGGTTGAA
GACTACAACCCCAGCCCTTGCTGTGTACCAAAGCAGTGGTCTGGGACGTT
GGGTAGTGTCACTGGCTCAGTAAGCGGTGGGAAACCATCGACAATGAACC
AGACCATCATGGAGTTTTATGATTATGACAAGATGAAAGTGGCACTGGTG
GGGAACGGCTTCAGGACTGTTGAAGACTACAACAAGGGAGTGTCATATTC
AATAGTTTCAAACCAGTGCACCACGAGCAAGTTGGCCAATTCTTTGTTCA
ACTGCATCCCTGCTAATGCCACATTTCTGGGATCGTACCAATACGGCGGC
CCAAAGGGACTGAAAGTAAACGACTACTCAATCGACTCTTTTTCCCCTGG
TCTCATCGGGAGGATTTCTTTCACCGCTGGCAGCTGTCTTCCGGTTCTGG
AGACCGTAATTCATGGCGGAACTGATGCGTATATTGGTGCCATTGGATTC
GTCAACATTGTCCCGTCGATTAAGGACCCTTCCGTGTTCGATGTACCCAG
TCCACCGTGCCCAAAGGACACAGATCTTAACAACTTTGTGGACATGCCAA
AGAGGCAAGGATCCATCTTTGCTCGTCTGCCCTGAATGTTGACCTTCGTG
GCAATCGCTCTATTGCTAGGGGCAACGATCGCAGACCCGGTTGAAGACTA
CAACCCCAGCCCTTGCTGTGTACCAAAGCAGTGGTCTGGGACGTTGGGTA
GTGTCACTGGCTCAGTAAGCGGTGGGAAACCATCGACAATGAACCAGACC
ATCATGGAGTTTTATGATTATGACAAGATGAAAGTGGCACTGGTGGGGAA
CGGCTTCAGGACTGTTGAAGACTACAACAAGGGAGTGTCATATTCAATAG
TTTCAAACCAGTGCACCACGAGCAAGTTGGCCAATTCTTTGTTCAACTGC
ATCCCTGCTAATGCCACATTTCTGGGATCGTACCAATACGGCGGCCCAAA
GGGACTGAAAGTAAACGACTACTCAATCGACTCTTTTTCCCCTGGTCTCA
TCGGGAGGATTTCTTTCACCGCTGGCAGCTGTCTTCCGGTTCTGGAGACC
GTAATTCATGGCGGAACTGATGCGTATATTGGTGCCATTGGATTCGTCAA
CATTGTCCCGTCGATTAAGGACCCTTCCGTGTTCGATGTACCCAGTCCAC
CGTGCCCAAAGGACACAGATCTTAACAACTTTGTGGACATGCCAAAGAGG
CAAGGATCCATCTTTGCTCGTCTGCCCTGAATGTTGACCTTCGTGGCAAT
CGCTCTATTGCTAGGGGCAACGATCGCAGACCCGGTTGAAGACTACAACC
CCAGCCCTTGCTGTGTACCAAAGCAGTGGTCTGGGACGTTGGGTAGTGTC
ACTGGCTCAGTAAGCGGTGGGAAACCATCGACAATGAACCAGACCATCAT
GGAGTTTTATGATTATGACAAGATGAAAGTGGCACTGGTGGGGAACGGCT
TCAGGACTGTTGAAGACTACAACAAGGGAGTGTCATATTCAATAGTTTCA
AACCAGTGCACCACGAGCAAGTTGGCCAATTCTTTGTTCAACTGCATCCC
TGCTAATGCCACATTTCTGGGATCGTACCAATACGGCGGCCCAAAGGGAC
TGAAAGTAAACGACTACTCAATCGACTCTTTTTCCCCTGGTCTCATCGGG
AGGATTTCTTTCACCGCTGGCAGCTGTCTTCCGGTTCTGGAGACCGTAAT
TCATGGCGGAACTGATGCGTATATTGGTGCCATTGGATTCGTCAACATTG
TCCCGTCGATTAAGGACCCTTCCGTGTTCGATGTACCCAGTCCACCGTGC
CCAAAGGACACAGATCTTAACAACTTTGTGGACATGCCAAAGAGGCAAGG
ATCCATCTTTGCTCGTCTGCCCTGAATGTTGACCTTCGTGGCAATCGCTC
TATTGCTAGGGGCAACGATCGCAGACCCGGTTGAAGACTACAACCCCAGC
CCTTGCTGTGTACCAAAGCAGTGGTCTGGGACGTTGGGTAGTGTCACTGG
CTCAGTAAGCGGTGGGAAACCATCGACAATGAACCAGACCATCATGGAGT
TTTATGATTATGACAAGATGAAAGTGGCACTGGTGGGGAACGGCTTCAGG
ACTGTTGAAGACTACAACAAGGGAGTGTCATATTCAATAGTTTCAAACCA
GTGCACCACGAGCAAGTTGGCCAATTCTTTGTTCAACTGCATCCCTGCTA
ATGCCACATTTCTGGGATCGTACCAATACGGCGGCCCAAAGGGACTGAAA
GTAAACGACTACTCAATCGACTCTTTTTCCCCTGGTCTCATCGGGAGGAT
TTCTTTCACCGCTGGCAGCTGTCTTCCGGTTCTGGAGACCGTAATTCATG
GCGGAACTGATGCGTATATTGGTGCCATTGGATTCGTCAACATTGTCCCG
TCGATTAAGGACCCTTCCGTGTTCGATGTACCCAGTCCACCGTGCCCAAA
GGACACAGATCTTAACAACTTTGTGGACATGCCAAAGAGGCAAGGATCCA
TCTTTGCTCGTCTGCCCTGAATGTTGACCTTCGTGGCAATCGCTCTATTG
CTAGGGGCAACGATCGCAGACCCGGTTGAAGACTACAACCCCAGCCCTTG
CTGTGTACCAAAGCAGTGGTCTGGGACGTTGGGTAGTGTCACTGGCTCAG
TAAGCGGTGGGAAACCATCGACAATGAACCAGACCATCATGGAGTTTTAT
GATTATGACAAGATGAAAGTGGCACTGGTGGGGAACGGCTTCAGGACTGT
TGAAGACTACAACAAGGGAGTGTCATATTCAATAGTTTCAAACCAGTGCA
CCACGAGCAAGTTGGCCAATTCTTTGTTCAACTGCATCCCTGCTAATGCC
ACATTTCTGGGATCGTACCAATACGGCGGCCCAAAGGGACTGAAAGTAAA
CGACTACTCAATCGACTCTTTTTCCCCTGGTCTCATCGGGAGGATTTCTT
TCACCGCTGGCAGCTGTCTTCCGGTTCTGGAGACCGTAATTCATGGCGGA
ACTGATGCGTATATTGGTGCCATTGGATTCGTCAACATTGTCCCGTCGAT
TAAGGACCCTTCCGTGTTCGATGTACCCAGTCCACCGTGCCCAAAGGACA
CAGATCTTAACAACTTTGTGGACATGCCAAAGAGGCAAGGATCCATCTTT
GCTCGTCTGCCCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000045 | genome | Sc0000045:1342684..1345923 - |
Properties
| Property Name | Value |
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| Transcript id | BL95471_evm0 |
| Biotype | protein_coding |
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